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The map label for this gene is recA

Identifier: 87199296

GI number: 87199296

Start: 1314279

End: 1315349

Strand: Direct

Name: recA

Synonym: Saro_1275

Alternate gene names: 87199296

Gene position: 1314279-1315349 (Clockwise)

Preceding gene: 87199293

Following gene: 87199297

Centisome position: 36.9

GC content: 63.68

Gene sequence:

>1071_bases
ATGGCGGCTCAGCTCAAGCTCATCGAGGAAGGTAAGACCAAGGACATGGATCGTCAGAAGGCGCTCGACGCGGCCCTTGC
GCAGATTGACCGCGCGTTCGGCAAGGGATCGGCCATGCGGCTCGGTTCGAAGGAAGCGATGCAGGTGGAAGCCGTTTCTA
CCGGATCGCTGGGGCTGGACATCGCGCTCGGCATCGGCGGCCTGCCGCGCGGCCGCATCATCGAGATCTACGGGCCGGAA
AGCTCGGGCAAGACCACGCTGGCGCTCCACGCCATCGCGGAAGCGCAGAAGGGCGGCGGCACCGCAGCCTTCATCGACGC
AGAACACGCGCTGGACCCGGTCTATGCCCGCAAGCTCGGCGTCGACATCGACAATCTGATCGTCTCGCAGCCCGACACGG
GCGAGCAGGCACTTGAAATCACCGACACGCTGGTGCGTTCGAACGCGATCGACGTGCTGGTGGTGGACTCGGTCGCCGCG
CTCGTTCCCCGCGCCGAAATCGAGGGTGAGATGGGCGATAGCCACGTCGGCCTCCAGGCCCGCCTGATGAGCCAGGCCCT
GCGCAAGCTGACCGGTTCGATCAGCCGTTCGCGCTGCATGGTGATCTTCATCAACCAGGTGCGCATGAAGATCGGTGTGA
TGTACGGCAACCCGGAAACGACGACGGGCGGCAACGCGCTCAAGTTCTATGCTTCGGTCCGCCTCGACATCCGCCGCACC
GGGCAGATCAAGGATCGCGACGAGATCGTAGGCAACGCCACGCGCGTGAAGGTCGTCAAGAACAAGGTCGCGCCGCCGTT
CAAGCAGGTCGAATTCGACATCATGTATGGCGAAGGCATCTCGAAGATCGGCGAAATTCTCGATCTCGGCGTGAAGGCCG
GGCTGGTCGAGAAGTCGGGCGCCTGGTTCAGCTATGATTCCATTCGCATCGGGCAGGGGCGTGAGAACGCCAAGAACTTC
CTGCGCGAAAATCCCGAAGTTTGCAGCCGTCTGGAAGCCGCGATCCGCGGCCGCACCGATCAGGTTGCCGAAGGACTGAT
GGCGGGCCCGGACGCGGACGACGACATCTGA

Upstream 100 bases:

>100_bases
AAGGAAATTTTCGTTCCCCCCTTGTTCTCATGGAACACAACGAGTACAACAAGCCTTGTTGACGGTTCGTGTGAGCCATC
TCTAGCAAGGGGAAGTAGCC

Downstream 100 bases:

>100_bases
TCCTTCAAGGCGGCGGGCAGCCCCTCCATCCCCGGGTTCTCCCGGGCCCGCCAGCCAGTCCAAAGAGCCCGCCCGCTCCC
CGGCAGGAACGTGCGGGCTT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MAAQLKLIEEGKTKDMDRQKALDAALAQIDRAFGKGSAMRLGSKEAMQVEAVSTGSLGLDIALGIGGLPRGRIIEIYGPE
SSGKTTLALHAIAEAQKGGGTAAFIDAEHALDPVYARKLGVDIDNLIVSQPDTGEQALEITDTLVRSNAIDVLVVDSVAA
LVPRAEIEGEMGDSHVGLQARLMSQALRKLTGSISRSRCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRT
GQIKDRDEIVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGLVEKSGAWFSYDSIRIGQGRENAKNF
LRENPEVCSRLEAAIRGRTDQVAEGLMAGPDADDDI

Sequences:

>Translated_356_residues
MAAQLKLIEEGKTKDMDRQKALDAALAQIDRAFGKGSAMRLGSKEAMQVEAVSTGSLGLDIALGIGGLPRGRIIEIYGPE
SSGKTTLALHAIAEAQKGGGTAAFIDAEHALDPVYARKLGVDIDNLIVSQPDTGEQALEITDTLVRSNAIDVLVVDSVAA
LVPRAEIEGEMGDSHVGLQARLMSQALRKLTGSISRSRCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRT
GQIKDRDEIVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGLVEKSGAWFSYDSIRIGQGRENAKNF
LRENPEVCSRLEAAIRGRTDQVAEGLMAGPDADDDI
>Mature_355_residues
AAQLKLIEEGKTKDMDRQKALDAALAQIDRAFGKGSAMRLGSKEAMQVEAVSTGSLGLDIALGIGGLPRGRIIEIYGPES
SGKTTLALHAIAEAQKGGGTAAFIDAEHALDPVYARKLGVDIDNLIVSQPDTGEQALEITDTLVRSNAIDVLVVDSVAAL
VPRAEIEGEMGDSHVGLQARLMSQALRKLTGSISRSRCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTG
QIKDRDEIVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGLVEKSGAWFSYDSIRIGQGRENAKNFL
RENPEVCSRLEAAIRGRTDQVAEGLMAGPDADDDI

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=342, Percent_Identity=66.3742690058479, Blast_Score=473, Evalue=1e-135,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 38196; Mature: 38065

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAQLKLIEEGKTKDMDRQKALDAALAQIDRAFGKGSAMRLGSKEAMQVEAVSTGSLGLD
CCCEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCCEE
IALGIGGLPRGRIIEIYGPESSGKTTLALHAIAEAQKGGGTAAFIDAEHALDPVYARKLG
EEECCCCCCCCCEEEEECCCCCCCEEEEEEEHHHHHCCCCEEEEEEHHHHCCHHHHHHHC
VDIDNLIVSQPDTGEQALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQA
CCHHHHEECCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHCCHHHCCCCCCCCCCCHHH
RLMSQALRKLTGSISRSRCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRT
HHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEEC
GQIKDRDEIVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGLVEKSG
CCCCCHHHHHCCCCEEEEEHHCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHCCCEECCC
AWFSYDSIRIGQGRENAKNFLRENPEVCSRLEAAIRGRTDQVAEGLMAGPDADDDI
CEEEECCEEECCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AAQLKLIEEGKTKDMDRQKALDAALAQIDRAFGKGSAMRLGSKEAMQVEAVSTGSLGLD
CCEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCCEE
IALGIGGLPRGRIIEIYGPESSGKTTLALHAIAEAQKGGGTAAFIDAEHALDPVYARKLG
EEECCCCCCCCCEEEEECCCCCCCEEEEEEEHHHHHCCCCEEEEEEHHHHCCHHHHHHHC
VDIDNLIVSQPDTGEQALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQA
CCHHHHEECCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHCCHHHCCCCCCCCCCCHHH
RLMSQALRKLTGSISRSRCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRT
HHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEEC
GQIKDRDEIVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGLVEKSG
CCCCCHHHHHCCCCEEEEEHHCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHCCCEECCC
AWFSYDSIRIGQGRENAKNFLRENPEVCSRLEAAIRGRTDQVAEGLMAGPDADDDI
CEEEECCEEECCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA