| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is adk
Identifier: 87199291
GI number: 87199291
Start: 1309682
End: 1310332
Strand: Direct
Name: adk
Synonym: Saro_1270
Alternate gene names: 87199291
Gene position: 1309682-1310332 (Clockwise)
Preceding gene: 87199290
Following gene: 87199292
Centisome position: 36.77
GC content: 67.28
Gene sequence:
>651_bases GTGAACATCATCCTGTTGGGCCCTCCGGGCGCGGGCAAGGGCACCCAGGCACAGCGTCTGGTCGAGCGGCATGGCATGAA GCAGCTCTCGACGGGCGACATGCTGCGCGCCGCCGTCAAGGCGGAGACGCCGGTCGGCCTCAAGGCCAAGGCAGTGATGG AGGCGGGGCAGCTCGTCTCGGACGAGATCGTCTCGGCGCTGATCGGCGACGAGCTCGACGCGATGCCGGCAGGCCAGGGC GCGATCTTCGACGGTTATCCGCGCACTGCACCCCAGGCAGAGTCGCTTGATGCCATCCTCGAGAGCCGCGGGCGCAAGCT TGACCACGTGATCGAGCTCGACGTCAACGAGGACGCGCTCGTCGAACGCATCACCGGCCGCTACACCTGCGCCACCTGCG GGAAGGGCTATCACGACAAGTTCGAGAAGCCTGCGGTCGAGGGCACCTGCGACAAGTGCGGCGGTCATGAATTCAAGCGC CGTCCCGACGACAACGAGGAAACCGTGCGCACGCGCATGGCGGAGTATCGCGCCAAGACCGCGCCGATCCTGCCGATCTA CGAGAGCCGCGGCATCGTGTCGCGCGTCGACGGCATGGCCGACATGGACGACGTCACGGCGGCCATTGAGGCGATCCTCG CGGCGCGCTAA
Upstream 100 bases:
>100_bases CAGTCGCACCTGCTGGCGCACCAGTACGGCGACCTGATCAAGAAGGCGAAACTGAAGGGACGGCTGCGCTGAGAGCCAGC GTCAAGAGGGGAACAATCGC
Downstream 100 bases:
>100_bases CGCTGGCAGGTGACCCGCCCGTCCCGGCGCGGGCGAGGGGGCCTGCCATGCTCAAGCATCTGATCTTTCTGGCGGCGGGG CTTGCGGGCTCCGCCGTTCC
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MNIILLGPPGAGKGTQAQRLVERHGMKQLSTGDMLRAAVKAETPVGLKAKAVMEAGQLVSDEIVSALIGDELDAMPAGQG AIFDGYPRTAPQAESLDAILESRGRKLDHVIELDVNEDALVERITGRYTCATCGKGYHDKFEKPAVEGTCDKCGGHEFKR RPDDNEETVRTRMAEYRAKTAPILPIYESRGIVSRVDGMADMDDVTAAIEAILAAR
Sequences:
>Translated_216_residues MNIILLGPPGAGKGTQAQRLVERHGMKQLSTGDMLRAAVKAETPVGLKAKAVMEAGQLVSDEIVSALIGDELDAMPAGQG AIFDGYPRTAPQAESLDAILESRGRKLDHVIELDVNEDALVERITGRYTCATCGKGYHDKFEKPAVEGTCDKCGGHEFKR RPDDNEETVRTRMAEYRAKTAPILPIYESRGIVSRVDGMADMDDVTAAIEAILAAR >Mature_216_residues MNIILLGPPGAGKGTQAQRLVERHGMKQLSTGDMLRAAVKAETPVGLKAKAVMEAGQLVSDEIVSALIGDELDAMPAGQG AIFDGYPRTAPQAESLDAILESRGRKLDHVIELDVNEDALVERITGRYTCATCGKGYHDKFEKPAVEGTCDKCGGHEFKR RPDDNEETVRTRMAEYRAKTAPILPIYESRGIVSRVDGMADMDDVTAAIEAILAAR
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family
Homologues:
Organism=Homo sapiens, GI4502013, Length=211, Percent_Identity=45.0236966824645, Blast_Score=176, Evalue=1e-44, Organism=Homo sapiens, GI7524346, Length=211, Percent_Identity=45.0236966824645, Blast_Score=176, Evalue=1e-44, Organism=Homo sapiens, GI310110345, Length=195, Percent_Identity=36.9230769230769, Blast_Score=134, Evalue=5e-32, Organism=Homo sapiens, GI53832003, Length=195, Percent_Identity=36.9230769230769, Blast_Score=134, Evalue=5e-32, Organism=Homo sapiens, GI8051579, Length=195, Percent_Identity=36.9230769230769, Blast_Score=134, Evalue=5e-32, Organism=Homo sapiens, GI53832001, Length=195, Percent_Identity=36.9230769230769, Blast_Score=134, Evalue=5e-32, Organism=Homo sapiens, GI19923437, Length=213, Percent_Identity=32.3943661971831, Blast_Score=128, Evalue=3e-30, Organism=Homo sapiens, GI4502011, Length=208, Percent_Identity=31.25, Blast_Score=106, Evalue=1e-23, Organism=Homo sapiens, GI7706497, Length=216, Percent_Identity=27.3148148148148, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI28144899, Length=219, Percent_Identity=26.9406392694064, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI28144897, Length=219, Percent_Identity=26.9406392694064, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI22749187, Length=188, Percent_Identity=27.1276595744681, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1786680, Length=218, Percent_Identity=46.7889908256881, Blast_Score=180, Evalue=6e-47, Organism=Caenorhabditis elegans, GI17552384, Length=211, Percent_Identity=44.0758293838863, Blast_Score=176, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17567503, Length=213, Percent_Identity=32.8638497652582, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17533833, Length=214, Percent_Identity=26.6355140186916, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17537943, Length=192, Percent_Identity=29.1666666666667, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320432, Length=198, Percent_Identity=45.959595959596, Blast_Score=172, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6321018, Length=197, Percent_Identity=35.0253807106599, Blast_Score=128, Evalue=8e-31, Organism=Saccharomyces cerevisiae, GI6322828, Length=212, Percent_Identity=29.7169811320755, Blast_Score=84, Evalue=2e-17, Organism=Drosophila melanogaster, GI22026816, Length=213, Percent_Identity=42.7230046948357, Blast_Score=172, Evalue=2e-43, Organism=Drosophila melanogaster, GI17737899, Length=195, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI24645822, Length=195, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI24663208, Length=216, Percent_Identity=31.4814814814815, Blast_Score=104, Evalue=4e-23, Organism=Drosophila melanogaster, GI17647141, Length=216, Percent_Identity=31.4814814814815, Blast_Score=104, Evalue=4e-23, Organism=Drosophila melanogaster, GI221459597, Length=216, Percent_Identity=28.7037037037037, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI21356893, Length=216, Percent_Identity=28.7037037037037, Blast_Score=89, Evalue=2e-18,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): KAD_NOVAD (Q2G8V9)
Other databases:
- EMBL: CP000248 - RefSeq: YP_496548.1 - HSSP: P16304 - ProteinModelPortal: Q2G8V9 - SMR: Q2G8V9 - STRING: Q2G8V9 - GeneID: 3917901 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_1270 - NMPDR: fig|48935.1.peg.1808 - eggNOG: COG0563 - HOGENOM: HBG630208 - OMA: CGEGYHD - PhylomeDB: Q2G8V9 - ProtClustDB: PRK00279 - BioCyc: NARO279238:SARO_1270-MONOMER - GO: GO:0005737 - HAMAP: MF_00235 - InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 - PANTHER: PTHR23359 - PRINTS: PR00094 - TIGRFAMs: TIGR01351
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid; SSF57774 Adenylate_kinase_Znf_lid
EC number: =2.7.4.3
Molecular weight: Translated: 23296; Mature: 23296
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIILLGPPGAGKGTQAQRLVERHGMKQLSTGDMLRAAVKAETPVGLKAKAVMEAGQLVS CEEEEECCCCCCCCHHHHHHHHHCCCHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH DEIVSALIGDELDAMPAGQGAIFDGYPRTAPQAESLDAILESRGRKLDHVIELDVNEDAL HHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHH VERITGRYTCATCGKGYHDKFEKPAVEGTCDKCGGHEFKRRPDDNEETVRTRMAEYRAKT HHHHCCCEEEECCCCCHHHHHCCCCCCCCCHHCCCCHHHCCCCCCHHHHHHHHHHHHHHC APILPIYESRGIVSRVDGMADMDDVTAAIEAILAAR CCCEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNIILLGPPGAGKGTQAQRLVERHGMKQLSTGDMLRAAVKAETPVGLKAKAVMEAGQLVS CEEEEECCCCCCCCHHHHHHHHHCCCHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH DEIVSALIGDELDAMPAGQGAIFDGYPRTAPQAESLDAILESRGRKLDHVIELDVNEDAL HHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHH VERITGRYTCATCGKGYHDKFEKPAVEGTCDKCGGHEFKRRPDDNEETVRTRMAEYRAKT HHHHCCCEEEECCCCCHHHHHCCCCCCCCCHHCCCCHHHCCCCCCHHHHHHHHHHHHHHC APILPIYESRGIVSRVDGMADMDDVTAAIEAILAAR CCCEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA