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The map label for this gene is secY

Identifier: 87199290

GI number: 87199290

Start: 1308286

End: 1309653

Strand: Direct

Name: secY

Synonym: Saro_1269

Alternate gene names: 87199290

Gene position: 1308286-1309653 (Clockwise)

Preceding gene: 161760695

Following gene: 87199291

Centisome position: 36.73

GC content: 61.77

Gene sequence:

>1368_bases
ATGGCATCACGCGCCGATAACATCGCCAGCAACCTCAATCTGGCCAACTTCTCCAAGGCAACCGAGCTCAAGAAGCGCAT
CTGGTTCACGGTGGGCGCGCTCATTGTATTCCGGTTCCTCAGCTTCGTGCCTCTGCCGGGCGTCAACCCGCTCATCATGG
AGACGCTGTACAACCAGACCAGGGGCGGCGTTCTCGACATCTTCAATGCCTTTTCGGGTGGTTCGCTCGAGCGCATGAGC
CTGATCGCACTCGGCGTGATGCCCTACATCACCGCCTCGATCGTCGTGCAGCTCGCCGCCTCGCTCCATCCCGCGCTCGC
GGCGATGAAGAAGGAGGGCGAAAGCGGACGCAAGAAGCTCAACCAGTACACCCGCTACGGCGCGGTGCTGCTGACCGCGA
TCCAGGGTTGGGTTCTGGCTTCGGGTCTCGAGGCCTATGGCGCCTCCAGCGGCCTCCAGGCCGTCGTGAACCCCGGCCTT
CTCTTCCGCGTAGGCGCGGTCATTTCGCTTATCGGCGGAACGATGTTCCTGCTGTGGCTGGGTGAACAGATCACCTCGCG
CGGGATCGGTAACGGCGTTTCGCTCATCATCATGGCGGGCATCGTCGCGCAGATGCCGAAGTTCTTCGGCAACCTGTTCG
AAGGCGGCCGGACGGGTTCGATCTCGCCGTTCCTGATCTTCGGCATCGTCATCATGTTGATCGCGCTTGTCATCGGCATC
TGCTTCCTCGAGCGGGCGACACGGCGATTGCTGATCCAGTATCCCAAGCGCGCGACCCAGCGCGGCATGATGGCTGCCGA
CCGCAGCCACCTGCCGCTGAAGATCAACACCGCAGGCGTGATCCCGCCAATCTTCGCCAGCTCGCTGCTGCTGCTTCCGC
TGACGATCACGCAGTTCGCCGGCAACTCCATCTCGCCCGACACGAAGATGGGCCAGGCGATCGTGACGCTGAACCAGTAC
CTTGGGCACGGCAAGCCGCTCTACATGCTGTTTTACGCGCTCGGCATCATCTTCTTCTCGTTCTTCTACACCGCGGTTGT
CTTCAACCCCGAGGAGACGGCCGAGAATCTGAAGAAGAACGGGGGCTTCATCCCGGGCATCCGTCCCGGCAAGAACACGG
CCAACTACCTCGACTATGTGCTGACTCGCATCACCGTGCTGGGCGCTGCATACATCACCGTGGTCTGCGTCGTGCCCGAG
TTCATCATGGCCGAGACGGGCATGGGTACGCTGTTCTTCGGCGGCACCAGCTTGCTCATCGTCGTGAACGTGACGGTCGA
CACGATCACCCAGATCCAGTCGCACCTGCTGGCGCACCAGTACGGCGACCTGATCAAGAAGGCGAAACTGAAGGGACGGC
TGCGCTGA

Upstream 100 bases:

>100_bases
GGGGTTCGACTTTCGTGACCCCGCACTATATGGGCTAGCTCAAGACGTCCGAGACCAGCGGCCATCGGCCCGGGCTCGCA
GCAAGGCTTAGAACCCCGAA

Downstream 100 bases:

>100_bases
GAGCCAGCGTCAAGAGGGGAACAATCGCGTGAACATCATCCTGTTGGGCCCTCCGGGCGCGGGCAAGGGCACCCAGGCAC
AGCGTCTGGTCGAGCGGCAT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MASRADNIASNLNLANFSKATELKKRIWFTVGALIVFRFLSFVPLPGVNPLIMETLYNQTRGGVLDIFNAFSGGSLERMS
LIALGVMPYITASIVVQLAASLHPALAAMKKEGESGRKKLNQYTRYGAVLLTAIQGWVLASGLEAYGASSGLQAVVNPGL
LFRVGAVISLIGGTMFLLWLGEQITSRGIGNGVSLIIMAGIVAQMPKFFGNLFEGGRTGSISPFLIFGIVIMLIALVIGI
CFLERATRRLLIQYPKRATQRGMMAADRSHLPLKINTAGVIPPIFASSLLLLPLTITQFAGNSISPDTKMGQAIVTLNQY
LGHGKPLYMLFYALGIIFFSFFYTAVVFNPEETAENLKKNGGFIPGIRPGKNTANYLDYVLTRITVLGAAYITVVCVVPE
FIMAETGMGTLFFGGTSLLIVVNVTVDTITQIQSHLLAHQYGDLIKKAKLKGRLR

Sequences:

>Translated_455_residues
MASRADNIASNLNLANFSKATELKKRIWFTVGALIVFRFLSFVPLPGVNPLIMETLYNQTRGGVLDIFNAFSGGSLERMS
LIALGVMPYITASIVVQLAASLHPALAAMKKEGESGRKKLNQYTRYGAVLLTAIQGWVLASGLEAYGASSGLQAVVNPGL
LFRVGAVISLIGGTMFLLWLGEQITSRGIGNGVSLIIMAGIVAQMPKFFGNLFEGGRTGSISPFLIFGIVIMLIALVIGI
CFLERATRRLLIQYPKRATQRGMMAADRSHLPLKINTAGVIPPIFASSLLLLPLTITQFAGNSISPDTKMGQAIVTLNQY
LGHGKPLYMLFYALGIIFFSFFYTAVVFNPEETAENLKKNGGFIPGIRPGKNTANYLDYVLTRITVLGAAYITVVCVVPE
FIMAETGMGTLFFGGTSLLIVVNVTVDTITQIQSHLLAHQYGDLIKKAKLKGRLR
>Mature_454_residues
ASRADNIASNLNLANFSKATELKKRIWFTVGALIVFRFLSFVPLPGVNPLIMETLYNQTRGGVLDIFNAFSGGSLERMSL
IALGVMPYITASIVVQLAASLHPALAAMKKEGESGRKKLNQYTRYGAVLLTAIQGWVLASGLEAYGASSGLQAVVNPGLL
FRVGAVISLIGGTMFLLWLGEQITSRGIGNGVSLIIMAGIVAQMPKFFGNLFEGGRTGSISPFLIFGIVIMLIALVIGIC
FLERATRRLLIQYPKRATQRGMMAADRSHLPLKINTAGVIPPIFASSLLLLPLTITQFAGNSISPDTKMGQAIVTLNQYL
GHGKPLYMLFYALGIIFFSFFYTAVVFNPEETAENLKKNGGFIPGIRPGKNTANYLDYVLTRITVLGAAYITVVCVVPEF
IMAETGMGTLFFGGTSLLIVVNVTVDTITQIQSHLLAHQYGDLIKKAKLKGRLR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=434, Percent_Identity=50.4608294930876, Blast_Score=406, Evalue=1e-114,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 49197; Mature: 49066

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRADNIASNLNLANFSKATELKKRIWFTVGALIVFRFLSFVPLPGVNPLIMETLYNQT
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
RGGVLDIFNAFSGGSLERMSLIALGVMPYITASIVVQLAASLHPALAAMKKEGESGRKKL
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NQYTRYGAVLLTAIQGWVLASGLEAYGASSGLQAVVNPGLLFRVGAVISLIGGTMFLLWL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
GEQITSRGIGNGVSLIIMAGIVAQMPKFFGNLFEGGRTGSISPFLIFGIVIMLIALVIGI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
CFLERATRRLLIQYPKRATQRGMMAADRSHLPLKINTAGVIPPIFASSLLLLPLTITQFA
HHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHC
GNSISPDTKMGQAIVTLNQYLGHGKPLYMLFYALGIIFFSFFYTAVVFNPEETAENLKKN
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHC
GGFIPGIRPGKNTANYLDYVLTRITVLGAAYITVVCVVPEFIMAETGMGTLFFGGTSLLI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEE
VVNVTVDTITQIQSHLLAHQYGDLIKKAKLKGRLR
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASRADNIASNLNLANFSKATELKKRIWFTVGALIVFRFLSFVPLPGVNPLIMETLYNQT
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
RGGVLDIFNAFSGGSLERMSLIALGVMPYITASIVVQLAASLHPALAAMKKEGESGRKKL
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NQYTRYGAVLLTAIQGWVLASGLEAYGASSGLQAVVNPGLLFRVGAVISLIGGTMFLLWL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
GEQITSRGIGNGVSLIIMAGIVAQMPKFFGNLFEGGRTGSISPFLIFGIVIMLIALVIGI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
CFLERATRRLLIQYPKRATQRGMMAADRSHLPLKINTAGVIPPIFASSLLLLPLTITQFA
HHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHC
GNSISPDTKMGQAIVTLNQYLGHGKPLYMLFYALGIIFFSFFYTAVVFNPEETAENLKKN
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHC
GGFIPGIRPGKNTANYLDYVLTRITVLGAAYITVVCVVPEFIMAETGMGTLFFGGTSLLI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEE
VVNVTVDTITQIQSHLLAHQYGDLIKKAKLKGRLR
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9322765; 10952301 [H]