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The map label for this gene is 87199260

Identifier: 87199260

GI number: 87199260

Start: 1289802

End: 1290305

Strand: Direct

Name: 87199260

Synonym: Saro_1238

Alternate gene names: NA

Gene position: 1289802-1290305 (Clockwise)

Preceding gene: 87199256

Following gene: 87199261

Centisome position: 36.21

GC content: 60.91

Gene sequence:

>504_bases
ATGACAGTGGCCGTAGACGAGATCGAAAATCCGCTGCTCAGTCTGACCGCGAAGCAGCGGGAAGTCCTCGACCTGCTTAT
CCAGCACAAGACGTCCAAGGAGATATCACGCCAGCTTGGCATCTCCCCGCACACGGTGGACCAGCGCATCATGCTGGCTC
GCGCCAAGCTTGGCGTCGCGACCCGCGGCGAGGTTGCCCAGGCCTACCGGCGCCTTGTGGAGACATACGAACAACCCGTA
TATGGACTTTCCGACCTAGGATTTCCGCCGCTTCCAGCGTCACAACCGTACCGGGACGACACGGATGTCGGACCGTCCTC
GAACACCCTGCCGCAGGGCGATGAAGGACTGGTCCGCTACCGGGTCCTCCCGGAAATGTTCGACGGGCCGTACGGAACGC
TGATGCGACTGGGCTATATCGCCGCGGTCACGGTATTCCTGATCCTGATCGTGCTGGGAGGGTTGACGATGTTTGCGCAA
CTTTCCTCCATGCTCGATCGCTGA

Upstream 100 bases:

>100_bases
TTCGGCATTGGAAAATGCGTGGTTCTGGTTCACAATGGAACTCGTGCAATTAACCTTTTCTGGCGGGAAGACGGTGGTTG
CTTCGGGGCGTAAAGACAAA

Downstream 100 bases:

>100_bases
CGAGGCCGGTCCTTCATTTCCCGCTGACAACCGGGGCAGGGCGCGTTGCGCGCGCGGCCCCTTTGCAAGGGGGCTGCCGT
GGCAACGCGGCAGGGCTTGA

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MTVAVDEIENPLLSLTAKQREVLDLLIQHKTSKEISRQLGISPHTVDQRIMLARAKLGVATRGEVAQAYRRLVETYEQPV
YGLSDLGFPPLPASQPYRDDTDVGPSSNTLPQGDEGLVRYRVLPEMFDGPYGTLMRLGYIAAVTVFLILIVLGGLTMFAQ
LSSMLDR

Sequences:

>Translated_167_residues
MTVAVDEIENPLLSLTAKQREVLDLLIQHKTSKEISRQLGISPHTVDQRIMLARAKLGVATRGEVAQAYRRLVETYEQPV
YGLSDLGFPPLPASQPYRDDTDVGPSSNTLPQGDEGLVRYRVLPEMFDGPYGTLMRLGYIAAVTVFLILIVLGGLTMFAQ
LSSMLDR
>Mature_166_residues
TVAVDEIENPLLSLTAKQREVLDLLIQHKTSKEISRQLGISPHTVDQRIMLARAKLGVATRGEVAQAYRRLVETYEQPVY
GLSDLGFPPLPASQPYRDDTDVGPSSNTLPQGDEGLVRYRVLPEMFDGPYGTLMRLGYIAAVTVFLILIVLGGLTMFAQL
SSMLDR

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18476; Mature: 18344

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAVDEIENPLLSLTAKQREVLDLLIQHKTSKEISRQLGISPHTVDQRIMLARAKLGVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
TRGEVAQAYRRLVETYEQPVYGLSDLGFPPLPASQPYRDDTDVGPSSNTLPQGDEGLVRY
CCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
RVLPEMFDGPYGTLMRLGYIAAVTVFLILIVLGGLTMFAQLSSMLDR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVAVDEIENPLLSLTAKQREVLDLLIQHKTSKEISRQLGISPHTVDQRIMLARAKLGVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
TRGEVAQAYRRLVETYEQPVYGLSDLGFPPLPASQPYRDDTDVGPSSNTLPQGDEGLVRY
CCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
RVLPEMFDGPYGTLMRLGYIAAVTVFLILIVLGGLTMFAQLSSMLDR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA