Click here to switch to the map view.

The map label for this gene is 87199254

Identifier: 87199254

GI number: 87199254

Start: 1283767

End: 1284747

Strand: Reverse

Name: 87199254

Synonym: Saro_1232

Alternate gene names: NA

Gene position: 1284747-1283767 (Counterclockwise)

Preceding gene: 87199257

Following gene: 87199252

Centisome position: 36.07

GC content: 64.02

Gene sequence:

>981_bases
TTGGATTCTGGTAAACGCGCACGTGGACAATTCGTTCGCGCCCTGATCGAGCGTGATCGCGGACCCGTGTCCTCGCTGGC
CTGGATGGCCGGCCTTCTGCTCGTGCCTACCGCCTTGCGCATGTCGCTCGACACCGGGTCGCTGGGATTGCCGTTCCTGA
CGTTCTGGCCAAGCATCCTTATCGCCGCGCTGGTCCTGGAGCTAAGGTTCGCGGCCATATTCGCACTGGTGACCGCGTTT
TTCGCGCAGCGCACTTTCGGCGGGGGCGCGTGGTTCCACGAAGTGACCACCGTCCGCGTGGTATTCTTCCTCCTCTTCGC
CACGTCGGCCGGCATGATCGTCGGCACTGGCACCATGCTGCGCCGGGTGCTGCGAGAGCTGGGCCAGGTCAACGAGCGAC
AGCAACGCTACAACACAGAGCTGCGCCACCGCGTCCGCAACATGCTCATGCTGATCCAGGCGCTCGCATCGCGCGGGCCC
AAGGCCACCTCACCGATGGATTTCTACAAGGAATTCTCGCTGCGCATCGAGGGCCTTGCCGAGGCCAGCGACCTGCTCCA
GATCGGCGCGGAAACAGAGGGCCGATTACCTCAGCTTGCGCGGCAGACCGTCGCCCCGTTCGACCGGGACGGGCGCATCC
GCCTGAGCGGCGAGCCATGCATCCTGCCGGCAGACAGCTGCATCCCGCTCATCATGGCGCTGCACGAACTTTGCACGAAC
GCGATAAAGCACGGCGCGCTGTCAAACGAGCGCGGCAGGGTCGAATTAAGCTGGTTCATCGGATCGGGCGGGTCGACACT
GTTCCTGCTTTGGACGGAAAAAGGTGGTCCGCAAGTGAAAGCGCCTGATCGCGAAGGCCTGGGCACGCGCCTGCTGATGC
CGCAGCCGGGGCTCGACGGGGTGGAACTGAATTTCGATCCCGATGGGGTATGGTGCGAGTTCAGGATCGAAGGCGCCAAG
GCCCTGACGGTTTCGGCCTGA

Upstream 100 bases:

>100_bases
GCCTTGCGCCGGAGCAGTGGTTCGCCCTAGGCTCGCTCCAAAGAACGATTGCGTCCGGGGTCGCAGCCGCGCAAGAGCCT
CATGGGGGAAGGCAGGGGTT

Downstream 100 bases:

>100_bases
GGCCGCAAAAAGGACCTAGAACCCAGCTTCGATGGCTACGCGGATCGCGTCGGCGCTGGTCTTGACGTCGAGCCCCTTGA
GCACGGCGGAACGATGCATC

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MDSGKRARGQFVRALIERDRGPVSSLAWMAGLLLVPTALRMSLDTGSLGLPFLTFWPSILIAALVLELRFAAIFALVTAF
FAQRTFGGGAWFHEVTTVRVVFFLLFATSAGMIVGTGTMLRRVLRELGQVNERQQRYNTELRHRVRNMLMLIQALASRGP
KATSPMDFYKEFSLRIEGLAEASDLLQIGAETEGRLPQLARQTVAPFDRDGRIRLSGEPCILPADSCIPLIMALHELCTN
AIKHGALSNERGRVELSWFIGSGGSTLFLLWTEKGGPQVKAPDREGLGTRLLMPQPGLDGVELNFDPDGVWCEFRIEGAK
ALTVSA

Sequences:

>Translated_326_residues
MDSGKRARGQFVRALIERDRGPVSSLAWMAGLLLVPTALRMSLDTGSLGLPFLTFWPSILIAALVLELRFAAIFALVTAF
FAQRTFGGGAWFHEVTTVRVVFFLLFATSAGMIVGTGTMLRRVLRELGQVNERQQRYNTELRHRVRNMLMLIQALASRGP
KATSPMDFYKEFSLRIEGLAEASDLLQIGAETEGRLPQLARQTVAPFDRDGRIRLSGEPCILPADSCIPLIMALHELCTN
AIKHGALSNERGRVELSWFIGSGGSTLFLLWTEKGGPQVKAPDREGLGTRLLMPQPGLDGVELNFDPDGVWCEFRIEGAK
ALTVSA
>Mature_326_residues
MDSGKRARGQFVRALIERDRGPVSSLAWMAGLLLVPTALRMSLDTGSLGLPFLTFWPSILIAALVLELRFAAIFALVTAF
FAQRTFGGGAWFHEVTTVRVVFFLLFATSAGMIVGTGTMLRRVLRELGQVNERQQRYNTELRHRVRNMLMLIQALASRGP
KATSPMDFYKEFSLRIEGLAEASDLLQIGAETEGRLPQLARQTVAPFDRDGRIRLSGEPCILPADSCIPLIMALHELCTN
AIKHGALSNERGRVELSWFIGSGGSTLFLLWTEKGGPQVKAPDREGLGTRLLMPQPGLDGVELNFDPDGVWCEFRIEGAK
ALTVSA

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR013655
- InterPro:   IPR011102 [H]

Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 35873; Mature: 35873

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSGKRARGQFVRALIERDRGPVSSLAWMAGLLLVPTALRMSLDTGSLGLPFLTFWPSIL
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
IAALVLELRFAAIFALVTAFFAQRTFGGGAWFHEVTTVRVVFFLLFATSAGMIVGTGTML
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECHHHH
RRVLRELGQVNERQQRYNTELRHRVRNMLMLIQALASRGPKATSPMDFYKEFSLRIEGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
EASDLLQIGAETEGRLPQLARQTVAPFDRDGRIRLSGEPCILPADSCIPLIMALHELCTN
HHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCEEECCHHHHHHHHHHHHHHHH
AIKHGALSNERGRVELSWFIGSGGSTLFLLWTEKGGPQVKAPDREGLGTRLLMPQPGLDG
HHHHCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCC
VELNFDPDGVWCEFRIEGAKALTVSA
EEEEECCCCEEEEEEECCCEEEEECC
>Mature Secondary Structure
MDSGKRARGQFVRALIERDRGPVSSLAWMAGLLLVPTALRMSLDTGSLGLPFLTFWPSIL
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
IAALVLELRFAAIFALVTAFFAQRTFGGGAWFHEVTTVRVVFFLLFATSAGMIVGTGTML
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECHHHH
RRVLRELGQVNERQQRYNTELRHRVRNMLMLIQALASRGPKATSPMDFYKEFSLRIEGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
EASDLLQIGAETEGRLPQLARQTVAPFDRDGRIRLSGEPCILPADSCIPLIMALHELCTN
HHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCEEECCHHHHHHHHHHHHHHHH
AIKHGALSNERGRVELSWFIGSGGSTLFLLWTEKGGPQVKAPDREGLGTRLLMPQPGLDG
HHHHCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCC
VELNFDPDGVWCEFRIEGAKALTVSA
EEEEECCCCEEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA