| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is folE [H]
Identifier: 87199252
GI number: 87199252
Start: 1282400
End: 1283035
Strand: Reverse
Name: folE [H]
Synonym: Saro_1230
Alternate gene names: 87199252
Gene position: 1283035-1282400 (Counterclockwise)
Preceding gene: 87199254
Following gene: 87199251
Centisome position: 36.02
GC content: 67.3
Gene sequence:
>636_bases ATGAACGTGCTCTCCCCATCCCTCGCCGCGTCGTCCGGCATGGCCGACGTGATCGGCGAGGACGGCAAGATCGTGGTGCC GGCCGACGTCGAGGAGGCGATCCGCACCCTCATCCGCTGGTCAGGCGACCAGCCCGAGCGCGAAGGCCTGCTCGACACGC CCAAGCGCGTGGCGCGGGCCTGGCGGGAATATTGCAGCGGCTATGCTCAGGACCCGGGGCTTCACCTGTCCCGCACGTTC GAGGAAGTCGGCGGCTACGATGAAGTCGTGCTGTTGCGCGACATCCCCTTTCAGAGCCACTGCGAACACCACATGGCGCC GATCACCGGGACCGCATCGATCGCCTACCTGCCCCGCGACCGGGTGGTCGGCATCTCGAAGCTCGCCCGCGTACTGCACG GATTTGCGCAGCGGCTGCAGGTGCAGGAACGGCTGACCGCGGAAGTGGCGCAATGCATCTGGGACAATCTCAAGCCGCAC GGCGTCGCGGTGGTGATCGAGGCGCAGCATGGCTGCATGACCGGGCGCGGCGTCAGGACGCACGGCGTGGGCATGGTTAC CAGCCGGATGCTCGGCTGCTTCCTCGATGACGCGAGCAGCCGCAAGGAAGTTCTGGCCCTGATGGGACGGGGTTGA
Upstream 100 bases:
>100_bases GGTATTCCAATGCGTGCCCTTTGGTCCGTGTTGGCAGGAAGCGGGGCGGGGCGCATCCGCAGGGCATCCCGCAACATTGC CACACCGGAGCCTTGCCGCA
Downstream 100 bases:
>100_bases TGGGACGGGGCTCAAACGGCTGAAAATGCAGATGCATGTTGCAATCGTTGGCGCGGGCATGGCCGGTCTTTCCTGCGCAA GCCATCTCGTGCGTGCAGGT
Product: GTP cyclohydrolase
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MNVLSPSLAASSGMADVIGEDGKIVVPADVEEAIRTLIRWSGDQPEREGLLDTPKRVARAWREYCSGYAQDPGLHLSRTF EEVGGYDEVVLLRDIPFQSHCEHHMAPITGTASIAYLPRDRVVGISKLARVLHGFAQRLQVQERLTAEVAQCIWDNLKPH GVAVVIEAQHGCMTGRGVRTHGVGMVTSRMLGCFLDDASSRKEVLALMGRG
Sequences:
>Translated_211_residues MNVLSPSLAASSGMADVIGEDGKIVVPADVEEAIRTLIRWSGDQPEREGLLDTPKRVARAWREYCSGYAQDPGLHLSRTF EEVGGYDEVVLLRDIPFQSHCEHHMAPITGTASIAYLPRDRVVGISKLARVLHGFAQRLQVQERLTAEVAQCIWDNLKPH GVAVVIEAQHGCMTGRGVRTHGVGMVTSRMLGCFLDDASSRKEVLALMGRG >Mature_211_residues MNVLSPSLAASSGMADVIGEDGKIVVPADVEEAIRTLIRWSGDQPEREGLLDTPKRVARAWREYCSGYAQDPGLHLSRTF EEVGGYDEVVLLRDIPFQSHCEHHMAPITGTASIAYLPRDRVVGISKLARVLHGFAQRLQVQERLTAEVAQCIWDNLKPH GVAVVIEAQHGCMTGRGVRTHGVGMVTSRMLGCFLDDASSRKEVLALMGRG
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=190, Percent_Identity=42.1052631578947, Blast_Score=151, Evalue=4e-37, Organism=Homo sapiens, GI4503949, Length=190, Percent_Identity=42.1052631578947, Blast_Score=151, Evalue=4e-37, Organism=Homo sapiens, GI66932970, Length=160, Percent_Identity=39.375, Blast_Score=118, Evalue=4e-27, Organism=Homo sapiens, GI66932972, Length=150, Percent_Identity=41.3333333333333, Blast_Score=115, Evalue=3e-26, Organism=Escherichia coli, GI1788476, Length=161, Percent_Identity=39.7515527950311, Blast_Score=115, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17560486, Length=179, Percent_Identity=43.0167597765363, Blast_Score=153, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6321706, Length=180, Percent_Identity=46.6666666666667, Blast_Score=156, Evalue=2e-39, Organism=Drosophila melanogaster, GI24656782, Length=182, Percent_Identity=43.4065934065934, Blast_Score=140, Evalue=4e-34, Organism=Drosophila melanogaster, GI24656796, Length=182, Percent_Identity=43.4065934065934, Blast_Score=140, Evalue=7e-34, Organism=Drosophila melanogaster, GI24656791, Length=182, Percent_Identity=43.4065934065934, Blast_Score=140, Evalue=8e-34,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 23072; Mature: 23072
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLSPSLAASSGMADVIGEDGKIVVPADVEEAIRTLIRWSGDQPEREGLLDTPKRVARA CCCCCCCHHHCCCCHHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH WREYCSGYAQDPGLHLSRTFEEVGGYDEVVLLRDIPFQSHCEHHMAPITGTASIAYLPRD HHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEECCCC RVVGISKLARVLHGFAQRLQVQERLTAEVAQCIWDNLKPHGVAVVIEAQHGCMTGRGVRT HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC HGVGMVTSRMLGCFLDDASSRKEVLALMGRG CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure MNVLSPSLAASSGMADVIGEDGKIVVPADVEEAIRTLIRWSGDQPEREGLLDTPKRVARA CCCCCCCHHHCCCCHHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH WREYCSGYAQDPGLHLSRTFEEVGGYDEVVLLRDIPFQSHCEHHMAPITGTASIAYLPRD HHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEECCCC RVVGISKLARVLHGFAQRLQVQERLTAEVAQCIWDNLKPHGVAVVIEAQHGCMTGRGVRT HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC HGVGMVTSRMLGCFLDDASSRKEVLALMGRG CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]