Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199235

Identifier: 87199235

GI number: 87199235

Start: 1261600

End: 1264326

Strand: Reverse

Name: 87199235

Synonym: Saro_1213

Alternate gene names: NA

Gene position: 1264326-1261600 (Counterclockwise)

Preceding gene: 87199236

Following gene: 87199234

Centisome position: 35.5

GC content: 67.77

Gene sequence:

>2727_bases
ATGATCTCCGCAACCGCCATCGTGGCCCTGGCAGCAACCCTTCCGGGTAGCTCGCCAGCAGGACCGGTTGCGTCCCTGCA
ACCAGCGTTCGGGGGCCAGACTGCCGATGCGCAGGCGCCCGATCTGCTGCTGCTTTCGGTCCAGCTCGATGGCGCGACCA
TCTCGGAGGCGTTGACCGCCTACGGCGATCCCGCCGATCCGCTGGTGCCGCTGGGCGAACTTGCGCGTCTTCTCGAACTG
CCGCTCGACATCGACGTACGGAACGGCGTGGCATCCGGCCGGATCGGGGAAAGCCAGCGACCGATCACCGTCGACCTCAA
GTCTGGACAGGCGCTCATCGGCGGCAAGGTCGTGGCGCTGGTTCCGCCGGACAGCCTTGTCACCGAGACGGACATCTACC
TGCGTGCCTCGCTCGTCGCAAAGCTCCTGCCGCTCAGGATCACCGCCACGCCAGAGGACATGCTTCTCACGCTCGAGGCC
ACTGAAAAGCTTCCGGTTCAGGCCCAGCGCGAGCGCCTCGCGCACCTTGCGGGCCTGTCCGGCCAGCCGGAGCAGCGCGA
CGATGCGATGCGGGTCGCAACGCCCTATCGCTGGCTGGGCGAACCGGCCTTCGACTTCACCGCCGAGCTTGGCCAGGCCG
ATGAGGGCAGCGACGGCGGACGCCGCACGATGACCCGCTTCGAGGGGCGTGTCGCCGGGGACCTGCTGCAAGCCGGCTTC
TCGGCCTGGCTGGCAACCGACGACAACGCCTCCCCGGCCGCCGCCCGCGTAGCCTTCACCAGGCGGTCGGAGGATGGGCG
CCTGCTGGGATCGCTTGGCGGCACGATGGCCGCCGTGGGCGATGTATTCACCCCTGCCATGACGATGGGCGCACGCTCGC
TCAATGGCGCCGGCCTGGTCTTCTCGTCGACGCGCGTGGACGAGGCGAGCGTATTCCAGCGCATCAACCTGCGCGGAGAA
CTGCCCGTCGGCTACGACGCCGAACTCTACGTCAACGATATCCTGCGCTCCGGCCAGCGCGGCGCCACCGCGCAAGGCCG
CTATGAATTCAACGACATACCGCTCGTACGCGGCCGCAACGCCATTCGCATCGTCCTCTATGGCCCCCGTGGCGAACGGG
TCGAGCGCACGCGCGTCATAAATGTCGGCGGCGGCCAGCTCGCGGCCGGTCGCACCACCGTCGATCTCGGCGTGGTCGCG
CAGGACAAACCGCTGATCGACCTGTCGGAATCGAGCATCGCAGGCTTTTCCGCCGGACGCGGCAGTCTCCGGGCGGTCCT
CAACGTCGCACATGGCCTTACCGAAGCGGCAACGCTGACGGGCGGCATCTCGCGCTTTTCGGACAGCCTCGGAAAGGCCC
ATACCATCGCCAGCGCGGGCCTGCGCAGTTCGGTGCTCGGCATGGCCCTGCAGGGTGACTTCGCCAGCGACTTTCGCGGG
GGACGGGCCGCTTCGCTCGGCATCGCCGGTAGGGTTGGAGGCGTCAGCTTTCTTGGCCGGCACGTCGAATATGGCGGTCG
CCTTGCCGACGAGGCCAACACCAGCTTCGATGCTTCACGGCCCATGCGCCGGTTCAGCGAACTTGTCTTCGACCTCGCCG
TTCCGCTCCCCGGCTCCCTCGGCCTGCCAGTATCGGGCCGCATGGAGCGCGCCGAATTCGCCGACGGCGGTCGCAGCCTC
ACCGCCCGCGCACGCACCACGGCCAGCCTCGGCGGCACGATCGTCGCGCTGGGCGCCGACTACAGCCATCGTTCCCAGCC
CGGCGCATCCGAAACGCGGATGAGCGGCAACGTCAGCGCATCGCGCCTGATCAATTATTCCTGGCAGTTGCGCGGCACCG
CCGACTTCCGCCTGAAACCCGGTTTCAGCCTCGAAACGCTGGGCTTTTCGGCCGACCACGCAATTGGCGATCGCTACAGC
GTGCGCTTTGGCGCCACGCGGACCTTCTCAAGCCGCGACGTGGCCCTTCAGGCCGGCGTCACCGCACGCCTGCCTTTCGG
CACCGCAACGCTTGGCGGCGACTGGTCGGCCGGACAGAACCGGTGGCGCGTAGGCCTGCAACTGAATTTCGGCCTTGCGC
GCGATCCGCTCAAGGGCCGCTATCGCATTACGCCCCCCGGCCCCGCCAATGGCGCAAGCGCCGCCCTGCTCGCCTTCATC
GATGCCAACGCCAACGGCCAGCGCGACAGGGGCGAGGAAGCCGTGCCGGGCGTGGTCGTCGAAGGGGGCGGACTCAAGAC
GGTCACCGATGCAGACGGGCGGGCTTTCGTCACCGGGCTTGGCGATGGCAGCATGACCACCCTGCGCACCGACGCCACTG
GCGCAGACACGGTCTTCGTTGCCGCGCCGCCGCAGAACATCGTCTTCGCCGCGCGGTCCGGCGGCATGACGACGATCCCG
TACCCCCTCGTGCCGACATCGGAACTGGTTGCGCGCATCGGCTTTCGCCGCAAGGACGGAGAGGTGGGCGGCCTCTCCGC
CGTAAAGCTGCGCCTCGTGTCGGCGAAGGGTGAAGTGATCCAGGGCATGACCGAGTTTGACGGAACAGCCGTGTTCGACC
AGGTACGTCCCGGAAAATACGCGATCGAGATCGATCCGGAACAGGGCGCACGCCTCGGCATGAGGCTCAAGTCTCCGATC
TTCGTGACAGTCGGCGCCGATGGCCGGACCATCGATGCCCTGGGCGAAGTGGCTTTCGACGAACCTGTCCGGATGGTGGA
ACGATGA

Upstream 100 bases:

>100_bases
CGTCCGCTCAAACGCGGCGAGACCGTGACCGCCACGTTCATCGCCGACGATGCGAAGCAGGCCCAGCCGGTCGCGACTGG
AACCCTCACCGCCTCCTGAC

Downstream 100 bases:

>100_bases
TCTGGCGCACGCTGACGATGCTGTTGCTGACCCTTGCCTTTGCCGGGGCAGCGAAAGCGCAATCCTATACCGTCTCCTCG
ATCACCGGCGGGTCGCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 908; Mature: 908

Protein sequence:

>908_residues
MISATAIVALAATLPGSSPAGPVASLQPAFGGQTADAQAPDLLLLSVQLDGATISEALTAYGDPADPLVPLGELARLLEL
PLDIDVRNGVASGRIGESQRPITVDLKSGQALIGGKVVALVPPDSLVTETDIYLRASLVAKLLPLRITATPEDMLLTLEA
TEKLPVQAQRERLAHLAGLSGQPEQRDDAMRVATPYRWLGEPAFDFTAELGQADEGSDGGRRTMTRFEGRVAGDLLQAGF
SAWLATDDNASPAAARVAFTRRSEDGRLLGSLGGTMAAVGDVFTPAMTMGARSLNGAGLVFSSTRVDEASVFQRINLRGE
LPVGYDAELYVNDILRSGQRGATAQGRYEFNDIPLVRGRNAIRIVLYGPRGERVERTRVINVGGGQLAAGRTTVDLGVVA
QDKPLIDLSESSIAGFSAGRGSLRAVLNVAHGLTEAATLTGGISRFSDSLGKAHTIASAGLRSSVLGMALQGDFASDFRG
GRAASLGIAGRVGGVSFLGRHVEYGGRLADEANTSFDASRPMRRFSELVFDLAVPLPGSLGLPVSGRMERAEFADGGRSL
TARARTTASLGGTIVALGADYSHRSQPGASETRMSGNVSASRLINYSWQLRGTADFRLKPGFSLETLGFSADHAIGDRYS
VRFGATRTFSSRDVALQAGVTARLPFGTATLGGDWSAGQNRWRVGLQLNFGLARDPLKGRYRITPPGPANGASAALLAFI
DANANGQRDRGEEAVPGVVVEGGGLKTVTDADGRAFVTGLGDGSMTTLRTDATGADTVFVAAPPQNIVFAARSGGMTTIP
YPLVPTSELVARIGFRRKDGEVGGLSAVKLRLVSAKGEVIQGMTEFDGTAVFDQVRPGKYAIEIDPEQGARLGMRLKSPI
FVTVGADGRTIDALGEVAFDEPVRMVER

Sequences:

>Translated_908_residues
MISATAIVALAATLPGSSPAGPVASLQPAFGGQTADAQAPDLLLLSVQLDGATISEALTAYGDPADPLVPLGELARLLEL
PLDIDVRNGVASGRIGESQRPITVDLKSGQALIGGKVVALVPPDSLVTETDIYLRASLVAKLLPLRITATPEDMLLTLEA
TEKLPVQAQRERLAHLAGLSGQPEQRDDAMRVATPYRWLGEPAFDFTAELGQADEGSDGGRRTMTRFEGRVAGDLLQAGF
SAWLATDDNASPAAARVAFTRRSEDGRLLGSLGGTMAAVGDVFTPAMTMGARSLNGAGLVFSSTRVDEASVFQRINLRGE
LPVGYDAELYVNDILRSGQRGATAQGRYEFNDIPLVRGRNAIRIVLYGPRGERVERTRVINVGGGQLAAGRTTVDLGVVA
QDKPLIDLSESSIAGFSAGRGSLRAVLNVAHGLTEAATLTGGISRFSDSLGKAHTIASAGLRSSVLGMALQGDFASDFRG
GRAASLGIAGRVGGVSFLGRHVEYGGRLADEANTSFDASRPMRRFSELVFDLAVPLPGSLGLPVSGRMERAEFADGGRSL
TARARTTASLGGTIVALGADYSHRSQPGASETRMSGNVSASRLINYSWQLRGTADFRLKPGFSLETLGFSADHAIGDRYS
VRFGATRTFSSRDVALQAGVTARLPFGTATLGGDWSAGQNRWRVGLQLNFGLARDPLKGRYRITPPGPANGASAALLAFI
DANANGQRDRGEEAVPGVVVEGGGLKTVTDADGRAFVTGLGDGSMTTLRTDATGADTVFVAAPPQNIVFAARSGGMTTIP
YPLVPTSELVARIGFRRKDGEVGGLSAVKLRLVSAKGEVIQGMTEFDGTAVFDQVRPGKYAIEIDPEQGARLGMRLKSPI
FVTVGADGRTIDALGEVAFDEPVRMVER
>Mature_908_residues
MISATAIVALAATLPGSSPAGPVASLQPAFGGQTADAQAPDLLLLSVQLDGATISEALTAYGDPADPLVPLGELARLLEL
PLDIDVRNGVASGRIGESQRPITVDLKSGQALIGGKVVALVPPDSLVTETDIYLRASLVAKLLPLRITATPEDMLLTLEA
TEKLPVQAQRERLAHLAGLSGQPEQRDDAMRVATPYRWLGEPAFDFTAELGQADEGSDGGRRTMTRFEGRVAGDLLQAGF
SAWLATDDNASPAAARVAFTRRSEDGRLLGSLGGTMAAVGDVFTPAMTMGARSLNGAGLVFSSTRVDEASVFQRINLRGE
LPVGYDAELYVNDILRSGQRGATAQGRYEFNDIPLVRGRNAIRIVLYGPRGERVERTRVINVGGGQLAAGRTTVDLGVVA
QDKPLIDLSESSIAGFSAGRGSLRAVLNVAHGLTEAATLTGGISRFSDSLGKAHTIASAGLRSSVLGMALQGDFASDFRG
GRAASLGIAGRVGGVSFLGRHVEYGGRLADEANTSFDASRPMRRFSELVFDLAVPLPGSLGLPVSGRMERAEFADGGRSL
TARARTTASLGGTIVALGADYSHRSQPGASETRMSGNVSASRLINYSWQLRGTADFRLKPGFSLETLGFSADHAIGDRYS
VRFGATRTFSSRDVALQAGVTARLPFGTATLGGDWSAGQNRWRVGLQLNFGLARDPLKGRYRITPPGPANGASAALLAFI
DANANGQRDRGEEAVPGVVVEGGGLKTVTDADGRAFVTGLGDGSMTTLRTDATGADTVFVAAPPQNIVFAARSGGMTTIP
YPLVPTSELVARIGFRRKDGEVGGLSAVKLRLVSAKGEVIQGMTEFDGTAVFDQVRPGKYAIEIDPEQGARLGMRLKSPI
FVTVGADGRTIDALGEVAFDEPVRMVER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95101; Mature: 95101

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISATAIVALAATLPGSSPAGPVASLQPAFGGQTADAQAPDLLLLSVQLDGATISEALTA
CCCHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHH
YGDPADPLVPLGELARLLELPLDIDVRNGVASGRIGESQRPITVDLKSGQALIGGKVVAL
CCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEECCCCEEECCEEEEE
VPPDSLVTETDIYLRASLVAKLLPLRITATPEDMLLTLEATEKLPVQAQRERLAHLAGLS
ECCCCCEECCHHHHHHHHHHHHHCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCC
GQPEQRDDAMRVATPYRWLGEPAFDFTAELGQADEGSDGGRRTMTRFEGRVAGDLLQAGF
CCCCCCCCCEEEECCHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHCH
SAWLATDDNASPAAARVAFTRRSEDGRLLGSLGGTMAAVGDVFTPAMTMGARSLNGAGLV
HEEEECCCCCCCCCEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEE
FSSTRVDEASVFQRINLRGELPVGYDAELYVNDILRSGQRGATAQGRYEFNDIPLVRGRN
EECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCCCEEECCC
AIRIVLYGPRGERVERTRVINVGGGQLAAGRTTVDLGVVAQDKPLIDLSESSIAGFSAGR
EEEEEEECCCCCCEEEEEEEECCCCEEECCCEEEEEEEEECCCCCEEECCCCCCCCCCCC
GSLRAVLNVAHGLTEAATLTGGISRFSDSLGKAHTIASAGLRSSVLGMALQGDFASDFRG
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEECCCCHHHCCC
GRAASLGIAGRVGGVSFLGRHVEYGGRLADEANTSFDASRPMRRFSELVFDLAVPLPGSL
CCEEEEECCCCCCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
GLPVSGRMERAEFADGGRSLTARARTTASLGGTIVALGADYSHRSQPGASETRMSGNVSA
CCCCCCCCCHHHHCCCCCEEEEHHHHHHCCCCEEEEEECCCCCCCCCCCCHHCCCCCCCH
SRLINYSWQLRGTADFRLKPGFSLETLGFSADHAIGDRYSVRFGATRTFSSRDVALQAGV
HHEEEEEEEEECCCCEEECCCCCEEECCCCCCCCCCCCEEEEECCEEECCCCCEEEECCC
TARLPFGTATLGGDWSAGQNRWRVGLQLNFGLARDPLKGRYRITPPGPANGASAALLAFI
EEECCCCCEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCEEEEEEE
DANANGQRDRGEEAVPGVVVEGGGLKTVTDADGRAFVTGLGDGSMTTLRTDATGADTVFV
ECCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCEEEEECCCCCEEEEEECCCCCCEEEE
AAPPQNIVFAARSGGMTTIPYPLVPTSELVARIGFRRKDGEVGGLSAVKLRLVSAKGEVI
ECCCCCEEEEECCCCCEECCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHH
QGMTEFDGTAVFDQVRPGKYAIEIDPEQGARLGMRLKSPIFVTVGADGRTIDALGEVAFD
HCHHHCCCEEEECCCCCCCEEEEECCCCCCEECEEECCCEEEEECCCCCCHHHHHHHHHC
EPVRMVER
CHHHHHCC
>Mature Secondary Structure
MISATAIVALAATLPGSSPAGPVASLQPAFGGQTADAQAPDLLLLSVQLDGATISEALTA
CCCHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHH
YGDPADPLVPLGELARLLELPLDIDVRNGVASGRIGESQRPITVDLKSGQALIGGKVVAL
CCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEECCCCEEECCEEEEE
VPPDSLVTETDIYLRASLVAKLLPLRITATPEDMLLTLEATEKLPVQAQRERLAHLAGLS
ECCCCCEECCHHHHHHHHHHHHHCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCC
GQPEQRDDAMRVATPYRWLGEPAFDFTAELGQADEGSDGGRRTMTRFEGRVAGDLLQAGF
CCCCCCCCCEEEECCHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHCH
SAWLATDDNASPAAARVAFTRRSEDGRLLGSLGGTMAAVGDVFTPAMTMGARSLNGAGLV
HEEEECCCCCCCCCEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEE
FSSTRVDEASVFQRINLRGELPVGYDAELYVNDILRSGQRGATAQGRYEFNDIPLVRGRN
EECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCCCEEECCC
AIRIVLYGPRGERVERTRVINVGGGQLAAGRTTVDLGVVAQDKPLIDLSESSIAGFSAGR
EEEEEEECCCCCCEEEEEEEECCCCEEECCCEEEEEEEEECCCCCEEECCCCCCCCCCCC
GSLRAVLNVAHGLTEAATLTGGISRFSDSLGKAHTIASAGLRSSVLGMALQGDFASDFRG
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEECCCCHHHCCC
GRAASLGIAGRVGGVSFLGRHVEYGGRLADEANTSFDASRPMRRFSELVFDLAVPLPGSL
CCEEEEECCCCCCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
GLPVSGRMERAEFADGGRSLTARARTTASLGGTIVALGADYSHRSQPGASETRMSGNVSA
CCCCCCCCCHHHHCCCCCEEEEHHHHHHCCCCEEEEEECCCCCCCCCCCCHHCCCCCCCH
SRLINYSWQLRGTADFRLKPGFSLETLGFSADHAIGDRYSVRFGATRTFSSRDVALQAGV
HHEEEEEEEEECCCCEEECCCCCEEECCCCCCCCCCCCEEEEECCEEECCCCCEEEECCC
TARLPFGTATLGGDWSAGQNRWRVGLQLNFGLARDPLKGRYRITPPGPANGASAALLAFI
EEECCCCCEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCEEEEEEE
DANANGQRDRGEEAVPGVVVEGGGLKTVTDADGRAFVTGLGDGSMTTLRTDATGADTVFV
ECCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCEEEEECCCCCEEEEEECCCCCCEEEE
AAPPQNIVFAARSGGMTTIPYPLVPTSELVARIGFRRKDGEVGGLSAVKLRLVSAKGEVI
ECCCCCEEEEECCCCCEECCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHH
QGMTEFDGTAVFDQVRPGKYAIEIDPEQGARLGMRLKSPIFVTVGADGRTIDALGEVAFD
HCHHHCCCEEEECCCCCCCEEEEECCCCCCEECEEECCCEEEEECCCCCCHHHHHHHHHC
EPVRMVER
CHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA