| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is argG [H]
Identifier: 87199217
GI number: 87199217
Start: 1242494
End: 1243708
Strand: Reverse
Name: argG [H]
Synonym: Saro_1195
Alternate gene names: 87199217
Gene position: 1243708-1242494 (Counterclockwise)
Preceding gene: 87199219
Following gene: 87199215
Centisome position: 34.92
GC content: 65.93
Gene sequence:
>1215_bases ATGTCCGATATCAAGAAGGTCGTCCTCGCCTACTCCGGCGGTCTCGACACCTCCGTCATCCTCAAGTGGCTGCAGGTCAC CTACAACTGCGAGGTGGTCACCTTCACCGCCGACCTCGGCCAGGGCGAGGAGCTCGAACCCGCGCGCGCCAAGGCAAAGC TGATGGGCGTGCCCGATCACCACATCTACATCGACGACCTGCGCGAGGAATTCGTGCGCGACTTCGTCTTCCCGATGATG CGCGCCAATGCCCGCTACGAGGGCGATTACCTGCTCGGCACCTCGATCGCCCGTCCGCTGATCTCCAAGCGCCTGATCGA AATCGCGCGCGAAACCGGAGCCGATGCCGTCGCCCACGGCGCGACCGGCAAGGGCAACGACCAGGTCCGCTTCGAACTGT CCGCCTACGCCCTCGAACCGGGCATCAAGGTTATCGCGCCCTGGCGCGAATGGGATCTCACCAGCCGCACCGCGCTGATC GCCTGGGCCGAAGCGCACCAGATTCCGGTCCCCAAGGACAAGCGCGGCGAAAGCCCGTTCTCGACCGACGCCAACCTCCT CCACACCTCGTCCGAAGGCAAGGTGCTGGAAGATCCGTGGCAGGAAACCCCGGACTACGTCTACTCGCGCACCGTCAATC CGGAAGACGCGCCCGACACCCCTGAGTACATCACCATCGACTTCGAGAAGGGCGATGGCGTCGCGCTCAACGGCGAGGCC ATGTCGCCCGCCACGCTGCTCGCCGCCCTCAACGACCTCGGCCGCAAGCACGGCATCGGCCGTCTCGATCTCGTCGAGAA CCGCTTCGTCGGCATGAAGAGCCGCGGCATGTACGAAACGCCCGGCGGCGAGATCTATGCCCGTGCCCATCGCGGCATCG AAAGCATCACCCTCGACCGGGGCGCGGCGCACCTCAAGGACGAGCTGATGCCCAAGTACGCGGAGCTGATCTACAACGGC TTCTGGTTCTCGCCCGAGCGCGAGATGCTGCAGGCCGCGATCGATCACTCGCAGGCCCGCGTGAACGGCACCGTCCGGCT CAAGCTCTACAAGGGCAGCGCCTCGGTCGTCGGCCGCAAGTCGCCCGACAGCCTCTACTCCGAACGCCACGTGACGTTCG AGGACGATGCCGGCGCCTACGACCAGAAGGACGCGGCGGGCTTCATCAAGCTCAACGCCCTGCGCCTTCGCCTGCTGGCG CAGCAGGGCCGCTGA
Upstream 100 bases:
>100_bases GCATTCTGCGAGGGATGGCCCAGCCTGCCCGGCAAAGGTTGCGATGTTGGACCTCGCCTGTTAGTCGCGCGGCGCGTAAT TCACGGGAGTCGTAGCGCCC
Downstream 100 bases:
>100_bases TCGCCGCGCTTCGGCGCTGCACAAGAGCTATCCACCGAAGAGTGCGGGGGTTGTGGATAACTCCCGCACTTTTCGCTTGC GCGACTCGGACGAGAGGCGC
Product: argininosuccinate synthase
Products: NA
Alternate protein names: Citrulline--aspartate ligase [H]
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MSDIKKVVLAYSGGLDTSVILKWLQVTYNCEVVTFTADLGQGEELEPARAKAKLMGVPDHHIYIDDLREEFVRDFVFPMM RANARYEGDYLLGTSIARPLISKRLIEIARETGADAVAHGATGKGNDQVRFELSAYALEPGIKVIAPWREWDLTSRTALI AWAEAHQIPVPKDKRGESPFSTDANLLHTSSEGKVLEDPWQETPDYVYSRTVNPEDAPDTPEYITIDFEKGDGVALNGEA MSPATLLAALNDLGRKHGIGRLDLVENRFVGMKSRGMYETPGGEIYARAHRGIESITLDRGAAHLKDELMPKYAELIYNG FWFSPEREMLQAAIDHSQARVNGTVRLKLYKGSASVVGRKSPDSLYSERHVTFEDDAGAYDQKDAAGFIKLNALRLRLLA QQGR
Sequences:
>Translated_404_residues MSDIKKVVLAYSGGLDTSVILKWLQVTYNCEVVTFTADLGQGEELEPARAKAKLMGVPDHHIYIDDLREEFVRDFVFPMM RANARYEGDYLLGTSIARPLISKRLIEIARETGADAVAHGATGKGNDQVRFELSAYALEPGIKVIAPWREWDLTSRTALI AWAEAHQIPVPKDKRGESPFSTDANLLHTSSEGKVLEDPWQETPDYVYSRTVNPEDAPDTPEYITIDFEKGDGVALNGEA MSPATLLAALNDLGRKHGIGRLDLVENRFVGMKSRGMYETPGGEIYARAHRGIESITLDRGAAHLKDELMPKYAELIYNG FWFSPEREMLQAAIDHSQARVNGTVRLKLYKGSASVVGRKSPDSLYSERHVTFEDDAGAYDQKDAAGFIKLNALRLRLLA QQGR >Mature_403_residues SDIKKVVLAYSGGLDTSVILKWLQVTYNCEVVTFTADLGQGEELEPARAKAKLMGVPDHHIYIDDLREEFVRDFVFPMMR ANARYEGDYLLGTSIARPLISKRLIEIARETGADAVAHGATGKGNDQVRFELSAYALEPGIKVIAPWREWDLTSRTALIA WAEAHQIPVPKDKRGESPFSTDANLLHTSSEGKVLEDPWQETPDYVYSRTVNPEDAPDTPEYITIDFEKGDGVALNGEAM SPATLLAALNDLGRKHGIGRLDLVENRFVGMKSRGMYETPGGEIYARAHRGIESITLDRGAAHLKDELMPKYAELIYNGF WFSPEREMLQAAIDHSQARVNGTVRLKLYKGSASVVGRKSPDSLYSERHVTFEDDAGAYDQKDAAGFIKLNALRLRLLAQ QGR
Specific function: Arginine biosynthesis; seventh step. [C]
COG id: COG0137
COG function: function code E; Argininosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the argininosuccinate synthase family. Type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI53759107, Length=406, Percent_Identity=46.551724137931, Blast_Score=359, Evalue=3e-99, Organism=Homo sapiens, GI16950633, Length=406, Percent_Identity=46.551724137931, Blast_Score=359, Evalue=3e-99, Organism=Escherichia coli, GI1789563, Length=423, Percent_Identity=27.1867612293144, Blast_Score=124, Evalue=9e-30, Organism=Saccharomyces cerevisiae, GI6324514, Length=407, Percent_Identity=43.2432432432432, Blast_Score=321, Evalue=2e-88, Organism=Drosophila melanogaster, GI21358151, Length=404, Percent_Identity=45.5445544554455, Blast_Score=332, Evalue=3e-91,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001518 - InterPro: IPR018223 - InterPro: IPR014729 [H]
Pfam domain/function: PF00764 Arginosuc_synth [H]
EC number: =6.3.4.5 [H]
Molecular weight: Translated: 44929; Mature: 44798
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00564 ARGININOSUCCIN_SYN_1 ; PS00565 ARGININOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIKKVVLAYSGGLDTSVILKWLQVTYNCEVVTFTADLGQGEELEPARAKAKLMGVPDH CCHHHEEHHHCCCCCCHHHHHHHHHHEECCEEEEEEECCCCCCCCCHHHHHHEEECCCCC HIYIDDLREEFVRDFVFPMMRANARYEGDYLLGTSIARPLISKRLIEIARETGADAVAHG EEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHCCC ATGKGNDQVRFELSAYALEPGIKVIAPWREWDLTSRTALIAWAEAHQIPVPKDKRGESPF CCCCCCCEEEEEEEEEEECCCCEEEECCHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCC STDANLLHTSSEGKVLEDPWQETPDYVYSRTVNPEDAPDTPEYITIDFEKGDGVALNGEA CCCCCEEEECCCCCEECCCHHCCCCHHEECCCCCCCCCCCCCEEEEEEECCCCEEECCCC MSPATLLAALNDLGRKHGIGRLDLVENRFVGMKSRGMYETPGGEIYARAHRGIESITLDR CCHHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCCCCCEECCCCCEEEHHHCCCCEEEECC GAAHLKDELMPKYAELIYNGFWFSPEREMLQAAIDHSQARVNGTVRLKLYKGSASVVGRK CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEECEEEEEEEEECCCCCCCCC SPDSLYSERHVTFEDDAGAYDQKDAAGFIKLNALRLRLLAQQGR CCHHHHHCCCCEECCCCCCCCCCCCCCEEEEHHHHHHHHHHCCC >Mature Secondary Structure SDIKKVVLAYSGGLDTSVILKWLQVTYNCEVVTFTADLGQGEELEPARAKAKLMGVPDH CHHHEEHHHCCCCCCHHHHHHHHHHEECCEEEEEEECCCCCCCCCHHHHHHEEECCCCC HIYIDDLREEFVRDFVFPMMRANARYEGDYLLGTSIARPLISKRLIEIARETGADAVAHG EEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHCCC ATGKGNDQVRFELSAYALEPGIKVIAPWREWDLTSRTALIAWAEAHQIPVPKDKRGESPF CCCCCCCEEEEEEEEEEECCCCEEEECCHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCC STDANLLHTSSEGKVLEDPWQETPDYVYSRTVNPEDAPDTPEYITIDFEKGDGVALNGEA CCCCCEEEECCCCCEECCCHHCCCCHHEECCCCCCCCCCCCCEEEEEEECCCCEEECCCC MSPATLLAALNDLGRKHGIGRLDLVENRFVGMKSRGMYETPGGEIYARAHRGIESITLDR CCHHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCCCCCEECCCCCEEEHHHCCCCEEEECC GAAHLKDELMPKYAELIYNGFWFSPEREMLQAAIDHSQARVNGTVRLKLYKGSASVVGRK CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEECEEEEEEEEECCCCCCCCC SPDSLYSERHVTFEDDAGAYDQKDAAGFIKLNALRLRLLAQQGR CCHHHHHCCCCEECCCCCCCCCCCCCCEEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA