| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199215
Identifier: 87199215
GI number: 87199215
Start: 1238854
End: 1239360
Strand: Reverse
Name: 87199215
Synonym: Saro_1193
Alternate gene names: NA
Gene position: 1239360-1238854 (Counterclockwise)
Preceding gene: 87199217
Following gene: 87199207
Centisome position: 34.8
GC content: 69.82
Gene sequence:
>507_bases ATGGCGACTTTCGCGGATGGCGACGCACAGGCTCCGGCGCAGGGGTTGACTCCGGGCAAGGGGCTGGTGGTGCTGGTCGT GGTGATCCTGGGCGTGGCGGCGTTCATCGCGATCAGCGGAGTGCTGGGGCTGCCGTCAGTCTATGGGGGGTTCCTGTTCG TGTTCACCTTCACCGGGCTGTTCCATGCCGCGCCGGACAAGCTCCTGCCCGCGAGCCTCGGAGCCTTTGTCGGGATCGGT CTCGCTTTCGCCCTCGCCGCCCTGCCCCCGGCCTTCGGCACCGGCGGGATCATTGCGGCGCTGTTGCTGGTGGTGGGCGC GGTCTATGCGCTGATCATGGGGTGGGCGCCGGTGGCGATCAACAATGCCGCGATGCTGTTCCTGACCGTGGGGGCGATCC CCGCGCTGCACCAGCGCGAGACGCTGATGGAGATGGCGCTTTCGACCGGGCTGGCGGCGGTGCTGGCGGGCGCGGTGCTG GCGCTGGCGCAGTTGCGGCGGGCGTAG
Upstream 100 bases:
>100_bases TCCTCGTGACGAGGAGAAACGGGTTGCCGGTGGTGCGTAATTGGGGTTCAAGGGACTTTCGCAAAGTGGTGATGAAATCC ACTCGAAAGAGGATTAACTG
Downstream 100 bases:
>100_bases CAGTTTCAGAACTGCCAGGCTTCCCCTCTCCCGCCCCTCTCCCCTGAGCCGAAGGCCACCGAAGGTACCGGGAGAGGGCT ATTTGTCAGCGTTTCAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MATFADGDAQAPAQGLTPGKGLVVLVVVILGVAAFIAISGVLGLPSVYGGFLFVFTFTGLFHAAPDKLLPASLGAFVGIG LAFALAALPPAFGTGGIIAALLLVVGAVYALIMGWAPVAINNAAMLFLTVGAIPALHQRETLMEMALSTGLAAVLAGAVL ALAQLRRA
Sequences:
>Translated_168_residues MATFADGDAQAPAQGLTPGKGLVVLVVVILGVAAFIAISGVLGLPSVYGGFLFVFTFTGLFHAAPDKLLPASLGAFVGIG LAFALAALPPAFGTGGIIAALLLVVGAVYALIMGWAPVAINNAAMLFLTVGAIPALHQRETLMEMALSTGLAAVLAGAVL ALAQLRRA >Mature_167_residues ATFADGDAQAPAQGLTPGKGLVVLVVVILGVAAFIAISGVLGLPSVYGGFLFVFTFTGLFHAAPDKLLPASLGAFVGIGL AFALAALPPAFGTGGIIAALLLVVGAVYALIMGWAPVAINNAAMLFLTVGAIPALHQRETLMEMALSTGLAAVLAGAVLA LAQLRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16738; Mature: 16607
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFADGDAQAPAQGLTPGKGLVVLVVVILGVAAFIAISGVLGLPSVYGGFLFVFTFTGL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FHAAPDKLLPASLGAFVGIGLAFALAALPPAFGTGGIIAALLLVVGAVYALIMGWAPVAI HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH NNAAMLFLTVGAIPALHQRETLMEMALSTGLAAVLAGAVLALAQLRRA CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATFADGDAQAPAQGLTPGKGLVVLVVVILGVAAFIAISGVLGLPSVYGGFLFVFTFTGL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FHAAPDKLLPASLGAFVGIGLAFALAALPPAFGTGGIIAALLLVVGAVYALIMGWAPVAI HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH NNAAMLFLTVGAIPALHQRETLMEMALSTGLAAVLAGAVLALAQLRRA CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA