| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199140
Identifier: 87199140
GI number: 87199140
Start: 1164233
End: 1164523
Strand: Reverse
Name: 87199140
Synonym: Saro_1118
Alternate gene names: NA
Gene position: 1164523-1164233 (Counterclockwise)
Preceding gene: 87199172
Following gene: 87199137
Centisome position: 32.7
GC content: 63.92
Gene sequence:
>291_bases ATGACCGTAGCCCGCCTGACCGACGCAGAGCGCGACGCGCTTCTGGCCGAATTGCCCGAGTGGGCCCTGCGGGAAGACGG CCTGGCCATCGTCCGCACGTTCCGCTTCGCGGACTTCTCCCAAGCATGGGGCTTCATGAACCGCGTCGCGCTTCATGCGG AAAAGACCGATCACCATCCCGAATGGTTCAACGTCTACAACCGCGTCGAAGTTACGCTGACCACCCACGACGCGGACGGT CTTTCCGCGCGCGACGCCGACATGGCGCGCGCGATGGAAAGCTTTCTCTAG
Upstream 100 bases:
>100_bases GCAGGCAATATCCGTGGCGACGAGACCGCACTCTTGCATGGCGCGACGCGATAGGGGAAAGCGCAGGCCCTGCCAAGGAC GCCGACGAAAAGGACATGCA
Downstream 100 bases:
>100_bases GGCTATTTGCCCAAGGGACGCTCGGCCGAACGCATCTGTTTGCGGAGCGCGCCGGGCATCCACCGGGAGGCGAATGCAAG CCGCCGCGCAGTCTTGCCGA
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MTVARLTDAERDALLAELPEWALREDGLAIVRTFRFADFSQAWGFMNRVALHAEKTDHHPEWFNVYNRVEVTLTTHDADG LSARDADMARAMESFL
Sequences:
>Translated_96_residues MTVARLTDAERDALLAELPEWALREDGLAIVRTFRFADFSQAWGFMNRVALHAEKTDHHPEWFNVYNRVEVTLTTHDADG LSARDADMARAMESFL >Mature_95_residues TVARLTDAERDALLAELPEWALREDGLAIVRTFRFADFSQAWGFMNRVALHAEKTDHHPEWFNVYNRVEVTLTTHDADGL SARDADMARAMESFL
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family
Homologues:
Organism=Homo sapiens, GI4557831, Length=92, Percent_Identity=54.3478260869565, Blast_Score=100, Evalue=4e-22, Organism=Homo sapiens, GI134133240, Length=91, Percent_Identity=48.3516483516484, Blast_Score=95, Evalue=1e-20, Organism=Caenorhabditis elegans, GI115533705, Length=93, Percent_Identity=52.6881720430108, Blast_Score=102, Evalue=4e-23, Organism=Drosophila melanogaster, GI45549100, Length=94, Percent_Identity=51.063829787234, Blast_Score=95, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHS_NOVAD (Q2G9B0)
Other databases:
- EMBL: CP000248 - RefSeq: YP_496397.1 - ProteinModelPortal: Q2G9B0 - SMR: Q2G9B0 - STRING: Q2G9B0 - GeneID: 3916414 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_1118 - eggNOG: COG2154 - HOGENOM: HBG705804 - OMA: IALICEK - PhylomeDB: Q2G9B0 - BioCyc: NARO279238:SARO_1118-MONOMER - HAMAP: MF_00434 - InterPro: IPR001533 - Gene3D: G3DSA:3.30.1360.20 - PANTHER: PTHR12599
Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh
EC number: =4.2.1.96
Molecular weight: Translated: 11009; Mature: 10878
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVARLTDAERDALLAELPEWALREDGLAIVRTFRFADFSQAWGFMNRVALHAEKTDHHP CCCCCCCCCHHHHHHHHCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC EWFNVYNRVEVTLTTHDADGLSARDADMARAMESFL HHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TVARLTDAERDALLAELPEWALREDGLAIVRTFRFADFSQAWGFMNRVALHAEKTDHHP CCCCCCCCHHHHHHHHCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC EWFNVYNRVEVTLTTHDADGLSARDADMARAMESFL HHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA