| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is fucK [C]
Identifier: 87199073
GI number: 87199073
Start: 1090260
End: 1091687
Strand: Reverse
Name: fucK [C]
Synonym: Saro_1051
Alternate gene names: 87199073
Gene position: 1091687-1090260 (Counterclockwise)
Preceding gene: 87199074
Following gene: 87199072
Centisome position: 30.65
GC content: 67.72
Gene sequence:
>1428_bases TTGTCTACGGGCGCAACGATAGTCATCGACCTCGGCAAGACGCTGAGCAAGGTCAGCCTCTGGGATCTGGACGGGCGGAT GCTCGACCGCCAGGTGCGCCCCAGCATCCCGCTCGAAATCGATGGCATCCGCCGCCTCGATGCACCCGACACCGGCCGCT GGCTGCTCGATGTCCTGTCCCGCTACGCCGATCATCCAGTGACGACCATCGTCCCGGTGGGCCACGGTGCGGGCATCGCA GCGCTGACCGATGGCAGGCTCGCCTTTCCGCCGCTGGACTACGAGCAGTCGATACCCGAAGCCGTGATGGCCGACTACCG CTCGCAGCGCGATCCCTTCGCCCGGACCGGCTCCCCCGCATTGCCCGACGGCCTCAACATCGGCAGCCAGCTCTGGTGGC TGGACCAGCTCCACCCCGATGTCATGGCGAACGCGACCCTGCTGCCCTGGGCGCAGTACTGGGCGTGGTTCCTCACCGGC AGGGCCGTCAGCGAAGTCACCAGCCTCGGTTGCCATTCCGACTTGTGGGACCCGCAGGACGGCGATTTCTCGCCAATGGC AAAGCGACTGGGCTGGGCGGCGCGGTTCGCCCCGATCGTGCGGGCGGGCGATACGGTCGGCGCGCTCCTTCCCGCCATTG CCGAAAGGACGGGCCTGTCGCCGGATGTCCAGGTCCTCGCAGGTCTCCATGATTCCAACGCCGCGCTCCTCGCCGCGCGC GGCTTTGCCGAGATTGCGGACAACGAGGCGACCGTCCTGTCCACCGGCACGTGGTTCATCGCCATGCGCCTGCCCGCCAC TCCGGTCGATACCGCTACCCTGCCCGAGGCGCGCGACTGCCTCGTCAATGTCGACGTCCACGGCCGCCCGGTGCCTTCCG CGCGCTTCATGGGCGGGCGCGAGATCGAGACGCTGATCGAGATCGACACCCGCCGCGTCGACATCAAGCCCGACCAGCCC GCGCTTCTTGCCGCCGTTCCCGAGGTCCTGCGCCACGGACGGATGATCCTGCCGACGCTCATGCGCGGCTTCGGACCCTA TCCGCACGGGCGGTTCGCATGGATCAACCGGCCCGAAGACTGGTTCGAGCGCCGCGCCGCCGCCTGCCTCTATGCCGCGC TCGTCGCCGATACCGCGCTCGACCTCATCGGATCGACCGGCCGCATCCTCGTCGAAGGCCGCTTTGCCGAGGCAGACGTA TTCGTGCGGGCATTGGCCTCGCTGCGGCCGGATTGTGCGGTATACACGGCGAACGCCCATAACGACGTATCGTTCGGTGC GCTCCGCCTGATCGATCCCGGCCTGAGGCCACAGGGCGAACTCGTTCGGATCGAACCGCTCGACACCGGATCGTGGGCCG ATCTCGATACCTACCGCAACCGCTGGCAGGCCGAGGTCGAAGCTGCAAAAGTGGAGCCCATTACGTGA
Upstream 100 bases:
>100_bases TACAGCGCTTGCGCCGCGCGCTTCTCCGCGCGACTTTTATGCTGGAAACGATCAAGATTGATTGCTATTGATCGTTTTCA AGCATGGTGGGAGAGAGCGC
Downstream 100 bases:
>100_bases GCAACGCCGCATGATCGCCGCCTCGATCCCCGATTTCCGGGAGCTTGCCCGCCGCCGCCTGCCGCATTTTCTGTTCGAAT ACATCGACGGCGGCTCCTAC
Product: carbohydrate kinase
Products: ADP; L-Fuculose 1-phosphate; H+ [C]
Alternate protein names: Carbohydrate Kinase Protein; Carbohydrate Kinase Fggy; Carbohydrate Kinase; Sugar Kinase; L-Fuculokinase; Sugar Kinase-Like Protein; Carbohydrate Kinases; Sugar Kinase Protein; Carbohydrate Kinase Fggy-Like Protein; Carbohydrate Kinase Contains FGGY Family Domain; L-Xylulose Kinase Involved In Competition For Nodulation
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MSTGATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYADHPVTTIVPVGHGAGIA ALTDGRLAFPPLDYEQSIPEAVMADYRSQRDPFARTGSPALPDGLNIGSQLWWLDQLHPDVMANATLLPWAQYWAWFLTG RAVSEVTSLGCHSDLWDPQDGDFSPMAKRLGWAARFAPIVRAGDTVGALLPAIAERTGLSPDVQVLAGLHDSNAALLAAR GFAEIADNEATVLSTGTWFIAMRLPATPVDTATLPEARDCLVNVDVHGRPVPSARFMGGREIETLIEIDTRRVDIKPDQP ALLAAVPEVLRHGRMILPTLMRGFGPYPHGRFAWINRPEDWFERRAAACLYAALVADTALDLIGSTGRILVEGRFAEADV FVRALASLRPDCAVYTANAHNDVSFGALRLIDPGLRPQGELVRIEPLDTGSWADLDTYRNRWQAEVEAAKVEPIT
Sequences:
>Translated_475_residues MSTGATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYADHPVTTIVPVGHGAGIA ALTDGRLAFPPLDYEQSIPEAVMADYRSQRDPFARTGSPALPDGLNIGSQLWWLDQLHPDVMANATLLPWAQYWAWFLTG RAVSEVTSLGCHSDLWDPQDGDFSPMAKRLGWAARFAPIVRAGDTVGALLPAIAERTGLSPDVQVLAGLHDSNAALLAAR GFAEIADNEATVLSTGTWFIAMRLPATPVDTATLPEARDCLVNVDVHGRPVPSARFMGGREIETLIEIDTRRVDIKPDQP ALLAAVPEVLRHGRMILPTLMRGFGPYPHGRFAWINRPEDWFERRAAACLYAALVADTALDLIGSTGRILVEGRFAEADV FVRALASLRPDCAVYTANAHNDVSFGALRLIDPGLRPQGELVRIEPLDTGSWADLDTYRNRWQAEVEAAKVEPIT >Mature_474_residues STGATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYADHPVTTIVPVGHGAGIAA LTDGRLAFPPLDYEQSIPEAVMADYRSQRDPFARTGSPALPDGLNIGSQLWWLDQLHPDVMANATLLPWAQYWAWFLTGR AVSEVTSLGCHSDLWDPQDGDFSPMAKRLGWAARFAPIVRAGDTVGALLPAIAERTGLSPDVQVLAGLHDSNAALLAARG FAEIADNEATVLSTGTWFIAMRLPATPVDTATLPEARDCLVNVDVHGRPVPSARFMGGREIETLIEIDTRRVDIKPDQPA LLAAVPEVLRHGRMILPTLMRGFGPYPHGRFAWINRPEDWFERRAAACLYAALVADTALDLIGSTGRILVEGRFAEADVF VRALASLRPDCAVYTANAHNDVSFGALRLIDPGLRPQGELVRIEPLDTGSWADLDTYRNRWQAEVEAAKVEPIT
Specific function: Fucose metabolism; second step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789168, Length=313, Percent_Identity=27.1565495207668, Blast_Score=65, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.51 [C]
Molecular weight: Translated: 51934; Mature: 51802
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLS CCCCCEEEEECCCCHHHCEEEECCCHHHHHHCCCCCCEEECCCEECCCCCCCHHHHHHHH RYADHPVTTIVPVGHGAGIAALTDGRLAFPPLDYEQSIPEAVMADYRSQRDPFARTGSPA HHCCCCCEEEEECCCCCCEEEEECCEEECCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCC LPDGLNIGSQLWWLDQLHPDVMANATLLPWAQYWAWFLTGRAVSEVTSLGCHSDLWDPQD CCCCCCCCCCEEEHHHCCHHHHHCCEECHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCC GDFSPMAKRLGWAARFAPIVRAGDTVGALLPAIAERTGLSPDVQVLAGLHDSNAALLAAR CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHEECCCCCCCEEEEEC GFAEIADNEATVLSTGTWFIAMRLPATPVDTATLPEARDCLVNVDVHGRPVPSARFMGGR CHHHHCCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCC EIETLIEIDTRRVDIKPDQPALLAAVPEVLRHGRMILPTLMRGFGPYPHGRFAWINRPED HHHHHEEECCEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEECCCCHH WFERRAAACLYAALVADTALDLIGSTGRILVEGRFAEADVFVRALASLRPDCAVYTANAH HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEECCCC NDVSFGALRLIDPGLRPQGELVRIEPLDTGSWADLDTYRNRWQAEVEAAKVEPIT CCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure STGATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLS CCCCEEEEECCCCHHHCEEEECCCHHHHHHCCCCCCEEECCCEECCCCCCCHHHHHHHH RYADHPVTTIVPVGHGAGIAALTDGRLAFPPLDYEQSIPEAVMADYRSQRDPFARTGSPA HHCCCCCEEEEECCCCCCEEEEECCEEECCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCC LPDGLNIGSQLWWLDQLHPDVMANATLLPWAQYWAWFLTGRAVSEVTSLGCHSDLWDPQD CCCCCCCCCCEEEHHHCCHHHHHCCEECHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCC GDFSPMAKRLGWAARFAPIVRAGDTVGALLPAIAERTGLSPDVQVLAGLHDSNAALLAAR CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHEECCCCCCCEEEEEC GFAEIADNEATVLSTGTWFIAMRLPATPVDTATLPEARDCLVNVDVHGRPVPSARFMGGR CHHHHCCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCC EIETLIEIDTRRVDIKPDQPALLAAVPEVLRHGRMILPTLMRGFGPYPHGRFAWINRPED HHHHHEEECCEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEECCCCHH WFERRAAACLYAALVADTALDLIGSTGRILVEGRFAEADVFVRALASLRPDCAVYTANAH HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEECCCC NDVSFGALRLIDPGLRPQGELVRIEPLDTGSWADLDTYRNRWQAEVEAAKVEPIT CCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Ca2+; Co2+; Mg2+; Mn2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 1.4 {L-fuculose}} [C]
Substrates: ATP; L-fuculose [C]
Specific reaction: ATP + L-fuculose --> ADP + L-Fuculose 1-phosphate + H+ [C]
General reaction: Phospho group transfer [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA