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The map label for this gene is nudL [H]

Identifier: 87199044

GI number: 87199044

Start: 1061135

End: 1061749

Strand: Reverse

Name: nudL [H]

Synonym: Saro_1022

Alternate gene names: 87199044

Gene position: 1061749-1061135 (Counterclockwise)

Preceding gene: 87199045

Following gene: 87199043

Centisome position: 29.81

GC content: 66.67

Gene sequence:

>615_bases
GTGAGCCTGCACGATCGCCTGACCAGGCTCTATGTCGAGGGGCACCGCACCCCGGCGCAGGACCTTTACGAAGACTGGCG
CCCCTTGCCCGAACACGGCCTGCGTCCCGCTGCCGTGCTGATCGCGGTGACCGACCGTGCCGGTCATGCCGATGGACCCG
GCGTGCTGCTGATCCATCGCCCGTCGCACATGCGTGCCCATCCCGGACAGGCTGCCTTTCCGGGCGGAAAGCTCGATCCT
GGCGAGACCCCGGTCGAGGCGGCCCTTCGCGAGGCATACGAGGAACTTGGCATCCGCCCCGAGGACGTGAAGGTGATCGG
CGAGACCGACCGCTTCCGCACCGGCACCGGCTATGACATCACGCCGGTGCTCGCCATGGTCCCGCCCGACCTTTCGCTGT
CGCCCAATCCCGCGGAAGTGGCGGACTGGTTCGAGCCGCCGCTCGGCTTTGTGCTGGACCCCGCACGGCACGCGCGAAAA
CCCGCCGAATACAATGGCCGAAAAGGCCACTACATCGAGATCATGTGGAACGAGCATCGCATCTGGGGCGTCACCGCCGC
GATCATCTCCAACCTTTCGAAGCGCATGGCCTGGAAGGACGCGGCCGATGACTGA

Upstream 100 bases:

>100_bases
GCAGTACATATGTGCAACTGATCGAACATGCACTGGCCGGGCATGGCGACGAACTGGTCGTCGAAAGTCTCGGGCAGCGC
TTCGGGCTGGTACCGCAGCC

Downstream 100 bases:

>100_bases
CCGGTTGCCCAAGGCCGACTGGACCGCCCGGGACGACCTCGCGGCCCTCGTAGCTGCGCTCGATCCAGACTCGCAGGGCA
ACTGCCGCTGGGTGGGCGGC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MSLHDRLTRLYVEGHRTPAQDLYEDWRPLPEHGLRPAAVLIAVTDRAGHADGPGVLLIHRPSHMRAHPGQAAFPGGKLDP
GETPVEAALREAYEELGIRPEDVKVIGETDRFRTGTGYDITPVLAMVPPDLSLSPNPAEVADWFEPPLGFVLDPARHARK
PAEYNGRKGHYIEIMWNEHRIWGVTAAIISNLSKRMAWKDAADD

Sequences:

>Translated_204_residues
MSLHDRLTRLYVEGHRTPAQDLYEDWRPLPEHGLRPAAVLIAVTDRAGHADGPGVLLIHRPSHMRAHPGQAAFPGGKLDP
GETPVEAALREAYEELGIRPEDVKVIGETDRFRTGTGYDITPVLAMVPPDLSLSPNPAEVADWFEPPLGFVLDPARHARK
PAEYNGRKGHYIEIMWNEHRIWGVTAAIISNLSKRMAWKDAADD
>Mature_203_residues
SLHDRLTRLYVEGHRTPAQDLYEDWRPLPEHGLRPAAVLIAVTDRAGHADGPGVLLIHRPSHMRAHPGQAAFPGGKLDPG
ETPVEAALREAYEELGIRPEDVKVIGETDRFRTGTGYDITPVLAMVPPDLSLSPNPAEVADWFEPPLGFVLDPARHARKP
AEYNGRKGHYIEIMWNEHRIWGVTAAIISNLSKRMAWKDAADD

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=154, Percent_Identity=35.0649350649351, Blast_Score=77, Evalue=1e-14,
Organism=Escherichia coli, GI1788115, Length=168, Percent_Identity=40.4761904761905, Blast_Score=84, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17536993, Length=153, Percent_Identity=30.0653594771242, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17510677, Length=136, Percent_Identity=35.2941176470588, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI18859683, Length=158, Percent_Identity=33.5443037974684, Blast_Score=74, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22682; Mature: 22551

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLHDRLTRLYVEGHRTPAQDLYEDWRPLPEHGLRPAAVLIAVTDRAGHADGPGVLLIHR
CCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEC
PSHMRAHPGQAAFPGGKLDPGETPVEAALREAYEELGIRPEDVKVIGETDRFRTGTGYDI
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEECCCCCCC
TPVLAMVPPDLSLSPNPAEVADWFEPPLGFVLDPARHARKPAEYNGRKGHYIEIMWNEHR
CCEEEECCCCCCCCCCHHHHHHHHCCCCCEEECCHHHHCCCCCCCCCCCCEEEEEECCCE
IWGVTAAIISNLSKRMAWKDAADD
EEHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SLHDRLTRLYVEGHRTPAQDLYEDWRPLPEHGLRPAAVLIAVTDRAGHADGPGVLLIHR
CHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEC
PSHMRAHPGQAAFPGGKLDPGETPVEAALREAYEELGIRPEDVKVIGETDRFRTGTGYDI
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEECCCCCCC
TPVLAMVPPDLSLSPNPAEVADWFEPPLGFVLDPARHARKPAEYNGRKGHYIEIMWNEHR
CCEEEECCCCCCCCCCHHHHHHHHCCCCCEEECCHHHHCCCCCCCCCCCCEEEEEECCCE
IWGVTAAIISNLSKRMAWKDAADD
EEHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA