| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is gutA [H]
Identifier: 87199019
GI number: 87199019
Start: 1040458
End: 1041885
Strand: Reverse
Name: gutA [H]
Synonym: Saro_0997
Alternate gene names: 87199019
Gene position: 1041885-1040458 (Counterclockwise)
Preceding gene: 87199020
Following gene: 87199018
Centisome position: 29.25
GC content: 67.44
Gene sequence:
>1428_bases ATGATCCCGATACAGGGCAAGGTTCCCACCCGCCTCGCCCTGTTCAACGGGCTTGGCAGCGTGGCCTACGGCATCAAGGA CAATGGCTTCGCCACGTTCCTGCTGCTGTTCTACAATCAGGTCCTGGGCATGGATGCGCGGCTGGTGAGCCTCGCGCTGC TGATCGCACTGGTGTTCGACGGGCTGATCGATCCGGTCGTCGGTCATATCAGCGATCGCACGCGCACGCATTGGGGCCGG CGACTGCCGTTCCTCTACCTCGCCCCGATCCCGCTGGGCCTGGCCTGGATATTCCTGTGGTCGCCCATCGGCGAGCCAAG CTTCGCGATGCTGCTGATGTCGGCGATCATGGTGCGCGCGCTGGTGGCCATGTGCGAGGTCCCCTCGGCAGCGCTGGTCG CCGAAATCAGTCGCGACTACGATGAGCGGACCCGCCTTACCCGGTTCCGCTTCCTGTTCTCGTGGGGCGGCGGACTGCTG ATGCTGCTGCTCGCCTATGGGGTGTTCCTGCCCAACGCCATGCTGGCGCGCGAGGGATACCGCAACTTCGGCCTGTTCGG CGCCGGGCTGATGGTGGCCTGCGTCCTGCTTTCCGCCATCGGGCAGCACCGGGCCGTGGCAGGCATGCCTCCCGAGCGCG CGACGGCGGACAAGGGCGCCCTCGCCTCGCTGGGCGAGATCCGCGAAAGCTTCTCGCACCCTGCGTGCCTCGTCGTCATG GCGGGAATCGCGGCGGCCCTGACCGCGCAGGGGATTACATTCGCGCTTTCGAATTACCTCTATCTCTACGTGTGGAAGTT CACGCCGACCGCGCTCAAGGCCTTCCCCTTCCTGCTTTTCGCCAGCGTCGTGGGCGCGTCGCTGCTGGTGGGCAAGGCGC AGGCGCGTTGGGGAAAGGCGGGGACCGTGATCCGCATGGCACCGCTCGGCATGGTCTTCTGGGCGGGACCCCTGATCCTG CGCTGGCTGGGGCTGTGGGCTCCGGACGGATCGACCGCGTCGATCGCGGGCATGTTCGCCTGCACGCTCCTGTCGAACAC GTTTACCGTCACGGGCACGATGACCCTGTGGTCGATGGTCGCGGACGTCGTCGAGGCTTCGGAGGAGCAGACGGGACGCC GCTCCGAAGGAACGCTTTCGGCCGGCGCATTCCTCGCCTCGAAGTGCGCCGGGGGACTGGGCGTATTCCTGACCGGGCTC CTGCTGAGCTTCGCGGGGCTCGAGGCGAACACGGCGCCTGCCGACGTGCTGCCCGAAGTCACCTATCGCCTGAGCCTTGC CTATGCGGCGAGCATCGCGCTCCTGGCCGTGCTGACGGCGCTGGTCGTGCAACGCTTCCCGATCGACCGGGCCGCACACG AGGCGCGGCTGGCGAGGCTCGACCAGGTGGCGAGGGTCGATCCGGACGCCGCGGGCCTTCATCCTTGA
Upstream 100 bases:
>100_bases TCGATGGCGGCATCACCGTGGGCCCGCGCCATAGCTGGGACCCGAACATGCCCGGCCTGTTCGATGCGCTGCAGCAGATG AAGGAAAGCGGCAAGGTTTC
Downstream 100 bases:
>100_bases CATGGATCGGGCGCGCCCATTAACCGAACGCTTAATTTTGACTTGAAAACACCACAGGCCCGATGGACAGTGCCGGGCGA GAAGGAGACGATCATGGATT
Product: Na+/melibiose symporter and related transporters-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MIPIQGKVPTRLALFNGLGSVAYGIKDNGFATFLLLFYNQVLGMDARLVSLALLIALVFDGLIDPVVGHISDRTRTHWGR RLPFLYLAPIPLGLAWIFLWSPIGEPSFAMLLMSAIMVRALVAMCEVPSAALVAEISRDYDERTRLTRFRFLFSWGGGLL MLLLAYGVFLPNAMLAREGYRNFGLFGAGLMVACVLLSAIGQHRAVAGMPPERATADKGALASLGEIRESFSHPACLVVM AGIAAALTAQGITFALSNYLYLYVWKFTPTALKAFPFLLFASVVGASLLVGKAQARWGKAGTVIRMAPLGMVFWAGPLIL RWLGLWAPDGSTASIAGMFACTLLSNTFTVTGTMTLWSMVADVVEASEEQTGRRSEGTLSAGAFLASKCAGGLGVFLTGL LLSFAGLEANTAPADVLPEVTYRLSLAYAASIALLAVLTALVVQRFPIDRAAHEARLARLDQVARVDPDAAGLHP
Sequences:
>Translated_475_residues MIPIQGKVPTRLALFNGLGSVAYGIKDNGFATFLLLFYNQVLGMDARLVSLALLIALVFDGLIDPVVGHISDRTRTHWGR RLPFLYLAPIPLGLAWIFLWSPIGEPSFAMLLMSAIMVRALVAMCEVPSAALVAEISRDYDERTRLTRFRFLFSWGGGLL MLLLAYGVFLPNAMLAREGYRNFGLFGAGLMVACVLLSAIGQHRAVAGMPPERATADKGALASLGEIRESFSHPACLVVM AGIAAALTAQGITFALSNYLYLYVWKFTPTALKAFPFLLFASVVGASLLVGKAQARWGKAGTVIRMAPLGMVFWAGPLIL RWLGLWAPDGSTASIAGMFACTLLSNTFTVTGTMTLWSMVADVVEASEEQTGRRSEGTLSAGAFLASKCAGGLGVFLTGL LLSFAGLEANTAPADVLPEVTYRLSLAYAASIALLAVLTALVVQRFPIDRAAHEARLARLDQVARVDPDAAGLHP >Mature_475_residues MIPIQGKVPTRLALFNGLGSVAYGIKDNGFATFLLLFYNQVLGMDARLVSLALLIALVFDGLIDPVVGHISDRTRTHWGR RLPFLYLAPIPLGLAWIFLWSPIGEPSFAMLLMSAIMVRALVAMCEVPSAALVAEISRDYDERTRLTRFRFLFSWGGGLL MLLLAYGVFLPNAMLAREGYRNFGLFGAGLMVACVLLSAIGQHRAVAGMPPERATADKGALASLGEIRESFSHPACLVVM AGIAAALTAQGITFALSNYLYLYVWKFTPTALKAFPFLLFASVVGASLLVGKAQARWGKAGTVIRMAPLGMVFWAGPLIL RWLGLWAPDGSTASIAGMFACTLLSNTFTVTGTMTLWSMVADVVEASEEQTGRRSEGTLSAGAFLASKCAGGLGVFLTGL LLSFAGLEANTAPADVLPEVTYRLSLAYAASIALLAVLTALVVQRFPIDRAAHEARLARLDQVARVDPDAAGLHP
Specific function: Probably involved in glucitol uptake [H]
COG id: COG2211
COG function: function code G; Na+/melibiose symporter and related transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]
Homologues:
Organism=Escherichia coli, GI1786466, Length=492, Percent_Identity=24.7967479674797, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI145693206, Length=449, Percent_Identity=26.7260579064588, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI48994989, Length=449, Percent_Identity=24.9443207126949, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI87082306, Length=435, Percent_Identity=23.9080459770115, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1787902, Length=470, Percent_Identity=22.3404255319149, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001927 - InterPro: IPR018043 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 50792; Mature: 50792
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPIQGKVPTRLALFNGLGSVAYGIKDNGFATFLLLFYNQVLGMDARLVSLALLIALVFD CCCCCCCCCHHHHHHHCHHHHEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GLIDPVVGHISDRTRTHWGRRLPFLYLAPIPLGLAWIFLWSPIGEPSFAMLLMSAIMVRA HHHHHHHHHHCHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LVAMCEVPSAALVAEISRDYDERTRLTRFRFLFSWGGGLLMLLLAYGVFLPNAMLAREGY HHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCC RNFGLFGAGLMVACVLLSAIGQHRAVAGMPPERATADKGALASLGEIRESFSHPACLVVM CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH AGIAAALTAQGITFALSNYLYLYVWKFTPTALKAFPFLLFASVVGASLLVGKAQARWGKA HHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GTVIRMAPLGMVFWAGPLILRWLGLWAPDGSTASIAGMFACTLLSNTFTVTGTMTLWSMV CCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHH ADVVEASEEQTGRRSEGTLSAGAFLASKCAGGLGVFLTGLLLSFAGLEANTAPADVLPEV HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH TYRLSLAYAASIALLAVLTALVVQRFPIDRAAHEARLARLDQVARVDPDAAGLHP HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MIPIQGKVPTRLALFNGLGSVAYGIKDNGFATFLLLFYNQVLGMDARLVSLALLIALVFD CCCCCCCCCHHHHHHHCHHHHEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GLIDPVVGHISDRTRTHWGRRLPFLYLAPIPLGLAWIFLWSPIGEPSFAMLLMSAIMVRA HHHHHHHHHHCHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LVAMCEVPSAALVAEISRDYDERTRLTRFRFLFSWGGGLLMLLLAYGVFLPNAMLAREGY HHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCC RNFGLFGAGLMVACVLLSAIGQHRAVAGMPPERATADKGALASLGEIRESFSHPACLVVM CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH AGIAAALTAQGITFALSNYLYLYVWKFTPTALKAFPFLLFASVVGASLLVGKAQARWGKA HHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GTVIRMAPLGMVFWAGPLILRWLGLWAPDGSTASIAGMFACTLLSNTFTVTGTMTLWSMV CCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHH ADVVEASEEQTGRRSEGTLSAGAFLASKCAGGLGVFLTGLLLSFAGLEANTAPADVLPEV HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH TYRLSLAYAASIALLAVLTALVVQRFPIDRAAHEARLARLDQVARVDPDAAGLHP HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9455482; 9384377 [H]