Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198980

Identifier: 87198980

GI number: 87198980

Start: 1005560

End: 1006276

Strand: Reverse

Name: 87198980

Synonym: Saro_0958

Alternate gene names: NA

Gene position: 1006276-1005560 (Counterclockwise)

Preceding gene: 87198981

Following gene: 87198978

Centisome position: 28.25

GC content: 65.69

Gene sequence:

>717_bases
ATGATTGGCAAAAGCATAAGGGCAATCGCGGGCACCATGATCGCGGCGGGCGCAGCCGTGCTTCTCATGGGCGCCGGCAA
GCCCGCAAAGCCCGCCCCCCGCGCGAACTGGGTGGCCTCCTCTACCGTGACGGCCGATGGTCACCACCTGCTCGGCAATC
CCGCGGCAAAACTGCGCCTCGTCGAATTCGTCAGCTACACCTGCCCGCATTGCTCGCACTTCGAGATCGAATCCGAAGGG
CAGCTCAAGATCGGCATGGTCCAGCCGGGCAAGGGCGCGATCGAGGTGCGCAACTTCGTGCGCGATCCGATCGACATGAC
CGTGGCGCTCATCACCAACTGCGTGCCGCCCAGCCGCTTCTTCACCCTGCACACCGCCTTCATGCGCAGCCAGGCCCAGT
GGATCGGCCCGCTCGCCAACTCGACCGAGGCGCAACGCCAGCGCTGGTTCAACGGCACCTTCGCCACCCGCACCCGCGCC
ATCGCCAGCGATTTCAGGTTCTACGACTTCATGGCCGCGCGGGGCATGGACCGCTCGACGCTCGACCGCTGCCTTTCGAA
CGAAGCTCTCGCCAAGAAGCTCGCGGCCGAAACCGACGAGGCGATCAACCAGTACAACGTATCGGGCACGCCCAGCTTCA
TGATCGACGGCATCCTCCTCGCCGGCACCCACGACTGGGCCTCCCTCCGCCCCCAGATCCTCGCTCGCCTCAACTGA

Upstream 100 bases:

>100_bases
TCGGGGATTCGCTGCGCGATATCGGTGACCCGGAACTGCGCACGGTACTGGAATCGCTGGCGCGCAGCCTCGACATCGCA
GCCAAGGGGGACAAGGTCGG

Downstream 100 bases:

>100_bases
CCCCTGCGCCGGCGCCGGCCTGCTTCGACAAATTGAGCGTCAGCAGGGAATGCTGCCGCTCCGCGATGCGTGGACAGGCG
CCGTCGTGACCGACCGTCCG

Product: protein-disulfide isomerase

Products: NA

Alternate protein names: DSBA Oxidoreductase; Protein-Disulfide Isomerase-Like Protein; Dsba OxidoreductaseTat Pathway Signal; ThiolDisulfide Interchange Protein DsbA Family; DsbA Family ThiolDisulfide Interchange Protein; Periplasmic Thiol-Disulphide Interchange Protein; Twin-Arginine Translocation Pathway Signal Protein; DsbA Oxidoreductase; Thiol-Disulfide Oxidoreductase Protein; Thiol-Disulfide Oxidoreductase D

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MIGKSIRAIAGTMIAAGAAVLLMGAGKPAKPAPRANWVASSTVTADGHHLLGNPAAKLRLVEFVSYTCPHCSHFEIESEG
QLKIGMVQPGKGAIEVRNFVRDPIDMTVALITNCVPPSRFFTLHTAFMRSQAQWIGPLANSTEAQRQRWFNGTFATRTRA
IASDFRFYDFMAARGMDRSTLDRCLSNEALAKKLAAETDEAINQYNVSGTPSFMIDGILLAGTHDWASLRPQILARLN

Sequences:

>Translated_238_residues
MIGKSIRAIAGTMIAAGAAVLLMGAGKPAKPAPRANWVASSTVTADGHHLLGNPAAKLRLVEFVSYTCPHCSHFEIESEG
QLKIGMVQPGKGAIEVRNFVRDPIDMTVALITNCVPPSRFFTLHTAFMRSQAQWIGPLANSTEAQRQRWFNGTFATRTRA
IASDFRFYDFMAARGMDRSTLDRCLSNEALAKKLAAETDEAINQYNVSGTPSFMIDGILLAGTHDWASLRPQILARLN
>Mature_238_residues
MIGKSIRAIAGTMIAAGAAVLLMGAGKPAKPAPRANWVASSTVTADGHHLLGNPAAKLRLVEFVSYTCPHCSHFEIESEG
QLKIGMVQPGKGAIEVRNFVRDPIDMTVALITNCVPPSRFFTLHTAFMRSQAQWIGPLANSTEAQRQRWFNGTFATRTRA
IASDFRFYDFMAARGMDRSTLDRCLSNEALAKKLAAETDEAINQYNVSGTPSFMIDGILLAGTHDWASLRPQILARLN

Specific function: Unknown

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25937; Mature: 25937

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGKSIRAIAGTMIAAGAAVLLMGAGKPAKPAPRANWVASSTVTADGHHLLGNPAAKLRL
CCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEECCEEECCCCEECCCCHHHHHH
VEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNFVRDPIDMTVALITNCVPPSRF
HHHHHHCCCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHCCCCHHH
FTLHTAFMRSQAQWIGPLANSTEAQRQRWFNGTFATRTRAIASDFRFYDFMAARGMDRST
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
LDRCLSNEALAKKLAAETDEAINQYNVSGTPSFMIDGILLAGTHDWASLRPQILARLN
HHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCEEEECCCCHHHHCHHHHHCCC
>Mature Secondary Structure
MIGKSIRAIAGTMIAAGAAVLLMGAGKPAKPAPRANWVASSTVTADGHHLLGNPAAKLRL
CCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEECCEEECCCCEECCCCHHHHHH
VEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNFVRDPIDMTVALITNCVPPSRF
HHHHHHCCCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHCCCCHHH
FTLHTAFMRSQAQWIGPLANSTEAQRQRWFNGTFATRTRAIASDFRFYDFMAARGMDRST
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
LDRCLSNEALAKKLAAETDEAINQYNVSGTPSFMIDGILLAGTHDWASLRPQILARLN
HHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCEEEECCCCHHHHCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA