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The map label for this gene is 87198915

Identifier: 87198915

GI number: 87198915

Start: 949958

End: 950257

Strand: Reverse

Name: 87198915

Synonym: Saro_0893

Alternate gene names: NA

Gene position: 950257-949958 (Counterclockwise)

Preceding gene: 87198919

Following gene: 87198911

Centisome position: 26.68

GC content: 63.33

Gene sequence:

>300_bases
ATGGACAGGGAACAGCGCGGCGGCTGGGTCTACATCATGGCCGACCACTATCGCGGCTCGATGTACGTTGGCGTCACCTC
GCATCTGGCACGCCGGGTCTTCCAGCACCGCAATGGGACCGGCTCCGACTATTGCGCCCGCCACAGCCTCGTCCGGCTCG
TCTGGGCGGAGCGAGGTGAAAACATTGAGGCCTGCATCGTCCACGAAAAGCGGCTCAAGCGCTGGCGGCGGGAATGGAAG
TTCGACCTGATCGAAGGGGCCAACCCGGACTGGGCCGATCTTTACGACATGCTCGTCTGA

Upstream 100 bases:

>100_bases
ACTCCGGAGCCTTCCGGGCAGGCGACCGATGTTGCGGCATCGGATGCAACTCCATTGCTCCGGGCTTGCCCCGGGGTGAG
GCTTCGTTCTCCCTCAATCG

Downstream 100 bases:

>100_bases
GGTGATCTGCGGTGTTGAACAAGCTAGCCTCACCCCGGGTCAAGCCCGGGGTGACGTTGAGCGAGTGGTAGGCGTTTACG
CTGCTGGAAGGTATGCAACG

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: Excinuclease ABC C Subunit Domain Protein; Excinuclease ABC C Subunit; Excinuclease ABC C Subunit-Like Protein; Endonuclease; Excinuclease ABC; Excinuclease ABC C Subunit Domain-Containing Protein; Endonuclease Containing A URI Domain; Excinuclease ABC C Subunit N-Terminal

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MDREQRGGWVYIMADHYRGSMYVGVTSHLARRVFQHRNGTGSDYCARHSLVRLVWAERGENIEACIVHEKRLKRWRREWK
FDLIEGANPDWADLYDMLV

Sequences:

>Translated_99_residues
MDREQRGGWVYIMADHYRGSMYVGVTSHLARRVFQHRNGTGSDYCARHSLVRLVWAERGENIEACIVHEKRLKRWRREWK
FDLIEGANPDWADLYDMLV
>Mature_99_residues
MDREQRGGWVYIMADHYRGSMYVGVTSHLARRVFQHRNGTGSDYCARHSLVRLVWAERGENIEACIVHEKRLKRWRREWK
FDLIEGANPDWADLYDMLV

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11839; Mature: 11839

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDREQRGGWVYIMADHYRGSMYVGVTSHLARRVFQHRNGTGSDYCARHSLVRLVWAERGE
CCCCCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
NIEACIVHEKRLKRWRREWKFDLIEGANPDWADLYDMLV
CEEEEEECHHHHHHHHHHCCCCEECCCCCCHHHHHHHHC
>Mature Secondary Structure
MDREQRGGWVYIMADHYRGSMYVGVTSHLARRVFQHRNGTGSDYCARHSLVRLVWAERGE
CCCCCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
NIEACIVHEKRLKRWRREWKFDLIEGANPDWADLYDMLV
CEEEEEECHHHHHHHHHHCCCCEECCCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA