| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198789
Identifier: 87198789
GI number: 87198789
Start: 816842
End: 817414
Strand: Reverse
Name: 87198789
Synonym: Saro_0766
Alternate gene names: NA
Gene position: 817414-816842 (Counterclockwise)
Preceding gene: 87198790
Following gene: 87198788
Centisome position: 22.95
GC content: 59.86
Gene sequence:
>573_bases ATGCGTGCTTCGCTCATCCTTGTCTTGCCAGCAGCATTTGCCTGCTCTGCCGCTTTTGCGCAGGAGATCGACACCGACAG TCAGCGGCTGGAGATGATCGGCACGGCGCCTTCGGCATGTGTTCTCGATGCTCCGACCGCTGCCAACGCCATCAATGCCA GCTTTACGAGCACGGGCACATCCAGCGGGCAGGTTCTTATCTCCCAGTTCGTCGATCCGCAGAACGCCAATCCCGTCGCG AGCTCGATAGAACTGGCGCTGCCAGTCATCTGCAATTCTTCCCATCAGTTCACGGTCCGCAGCGGCAATGGCGGCCTGCT GCGGAACGGCGGGAGCATCGCCAACCGCCAAAGCTCGACGTCCTTCGCGGATTTTGTCACATACAGGCTGGGCGTTGATT GGGCAGGAAAATCGGTCGATCAGTCAACCGATGAGGGGACCATTCTGCTCGATGCCTTGAACGCCCGTGCGGGCGAAATC GCCTTGAGGATCGCAACGCCATCAGGCGGCGGACCGCTTACGGCGGGACGGTTCGACGATACCATAATTGTCGAGTTTCG CGCGGCGAATTGA
Upstream 100 bases:
>100_bases GCATAGAAATCGACGCCGGTGCCTCCAATGTGCAGACCAACGCCCCGGTGCTTGCCGGCGTTTACGGAGACACACTGCGC ATTTTCATGGAGCCCCGCTG
Downstream 100 bases:
>100_bases AATGACCAAGAGCCCGCGGGCCTTGACAGGAGGATGACTTGAGGATCGGATTCAAGAGAGTTCTGGCGATGCTCGCCGCA GCGCTTGTTCAAACAGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MRASLILVLPAAFACSAAFAQEIDTDSQRLEMIGTAPSACVLDAPTAANAINASFTSTGTSSGQVLISQFVDPQNANPVA SSIELALPVICNSSHQFTVRSGNGGLLRNGGSIANRQSSTSFADFVTYRLGVDWAGKSVDQSTDEGTILLDALNARAGEI ALRIATPSGGGPLTAGRFDDTIIVEFRAAN
Sequences:
>Translated_190_residues MRASLILVLPAAFACSAAFAQEIDTDSQRLEMIGTAPSACVLDAPTAANAINASFTSTGTSSGQVLISQFVDPQNANPVA SSIELALPVICNSSHQFTVRSGNGGLLRNGGSIANRQSSTSFADFVTYRLGVDWAGKSVDQSTDEGTILLDALNARAGEI ALRIATPSGGGPLTAGRFDDTIIVEFRAAN >Mature_190_residues MRASLILVLPAAFACSAAFAQEIDTDSQRLEMIGTAPSACVLDAPTAANAINASFTSTGTSSGQVLISQFVDPQNANPVA SSIELALPVICNSSHQFTVRSGNGGLLRNGGSIANRQSSTSFADFVTYRLGVDWAGKSVDQSTDEGTILLDALNARAGEI ALRIATPSGGGPLTAGRFDDTIIVEFRAAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19594; Mature: 19594
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRASLILVLPAAFACSAAFAQEIDTDSQRLEMIGTAPSACVLDAPTAANAINASFTSTGT CCCEEEEEECHHHHHHHHHHHHCCCCCHHEEEECCCCCCEEEECCCCCCEECCCCCCCCC SSGQVLISQFVDPQNANPVASSIELALPVICNSSHQFTVRSGNGGLLRNGGSIANRQSST CCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCEEECCCCCCCCCCCC SFADFVTYRLGVDWAGKSVDQSTDEGTILLDALNARAGEIALRIATPSGGGPLTAGRFDD CHHHHEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCC TIIVEFRAAN EEEEEEEECC >Mature Secondary Structure MRASLILVLPAAFACSAAFAQEIDTDSQRLEMIGTAPSACVLDAPTAANAINASFTSTGT CCCEEEEEECHHHHHHHHHHHHCCCCCHHEEEECCCCCCEEEECCCCCCEECCCCCCCCC SSGQVLISQFVDPQNANPVASSIELALPVICNSSHQFTVRSGNGGLLRNGGSIANRQSST CCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCEEECCCCCCCCCCCC SFADFVTYRLGVDWAGKSVDQSTDEGTILLDALNARAGEIALRIATPSGGGPLTAGRFDD CHHHHEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCC TIIVEFRAAN EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA