| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198747
Identifier: 87198747
GI number: 87198747
Start: 762499
End: 763257
Strand: Reverse
Name: 87198747
Synonym: Saro_0723
Alternate gene names: NA
Gene position: 763257-762499 (Counterclockwise)
Preceding gene: 87198748
Following gene: 87198746
Centisome position: 21.43
GC content: 59.55
Gene sequence:
>759_bases ATGAACGAATTCGCAGACCTGTTCCTGCCTGATGCCGAAGGCGCCACTTCGCCGGACTACTATGACTTCGGCTGCAGTTC AGGCGGGAACCTGGCGTTCATCGCCGGATTCCTGCCCGAACTGAAGGGTGTCGGCATAGATATAAACGAGGCCAAGGTCG CACTCGCCCAAAATCGCGGGCAAGAGGCGATCGTCCGCGACATCCTGAAGATGCCGGAAAGCAAGCAGGTGGATTTCGTC ACCATGGCGCATTTCCTTGAGCACCTGCTTTCCACGCAGGCCGCCGGCATGTTCCTTCGCAAGGCGGCTCGCATCGCGCG ATCCTTCGTCCACGTCCGCCAGCCCTGGTTCGATGCCGATGGCTATCTGCTGTCGAAGGGGTTGAAATTCTATTGGTCCG ACTGGCGAGGCCACCGCAATGCGATGACATCGCTCGACTTTCACAAGATTTGCCGTGACCTGCTGGCGAAAGGCGAAATC GCCTCGTTCGGCATCTACGGACGCGGTCCGATTGCGGATTCCGAAAGTGAGATGGTGATACCCGTCGATGCGCCATTCGA CAGCCAGAAATACGTTGAAACGCTGGGCCCCAAGCCGGCGGTCGGCTTCGAAATACCTGTTTTTGCAGAGATCCTCGTGG ATATCGCCGTCGTCCGGGGGGCCGAAAGCGACGCCAATCGGCGCGCGCTCCTGCGACGGCTCGACATGAAATTGCCGGTC GTGCCGATCATCGAAAGCGCCGGGCATTGCTGGCCGTGA
Upstream 100 bases:
>100_bases TCGCTCGCGCGGTTCGCTCCATGCAGCAGAACCCGCACCTGGGCCGCCTGCGCACTGCCGCGGCCCGCCTGTTCGCCGTC ACCACACCGGAGACACCTGC
Downstream 100 bases:
>100_bases CGGCTGCCCGGCAACCCGCAGGCCCTGGCCGCATCCGCGCTTGGCTCGCGGGCATCCCGCTCAGGCATCGATGGTTCGCT TTACTGGTCGCGGTGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MNEFADLFLPDAEGATSPDYYDFGCSSGGNLAFIAGFLPELKGVGIDINEAKVALAQNRGQEAIVRDILKMPESKQVDFV TMAHFLEHLLSTQAAGMFLRKAARIARSFVHVRQPWFDADGYLLSKGLKFYWSDWRGHRNAMTSLDFHKICRDLLAKGEI ASFGIYGRGPIADSESEMVIPVDAPFDSQKYVETLGPKPAVGFEIPVFAEILVDIAVVRGAESDANRRALLRRLDMKLPV VPIIESAGHCWP
Sequences:
>Translated_252_residues MNEFADLFLPDAEGATSPDYYDFGCSSGGNLAFIAGFLPELKGVGIDINEAKVALAQNRGQEAIVRDILKMPESKQVDFV TMAHFLEHLLSTQAAGMFLRKAARIARSFVHVRQPWFDADGYLLSKGLKFYWSDWRGHRNAMTSLDFHKICRDLLAKGEI ASFGIYGRGPIADSESEMVIPVDAPFDSQKYVETLGPKPAVGFEIPVFAEILVDIAVVRGAESDANRRALLRRLDMKLPV VPIIESAGHCWP >Mature_252_residues MNEFADLFLPDAEGATSPDYYDFGCSSGGNLAFIAGFLPELKGVGIDINEAKVALAQNRGQEAIVRDILKMPESKQVDFV TMAHFLEHLLSTQAAGMFLRKAARIARSFVHVRQPWFDADGYLLSKGLKFYWSDWRGHRNAMTSLDFHKICRDLLAKGEI ASFGIYGRGPIADSESEMVIPVDAPFDSQKYVETLGPKPAVGFEIPVFAEILVDIAVVRGAESDANRRALLRRLDMKLPV VPIIESAGHCWP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27891; Mature: 27891
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEFADLFLPDAEGATSPDYYDFGCSSGGNLAFIAGFLPELKGVGIDINEAKVALAQNRG CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHCCC QEAIVRDILKMPESKQVDFVTMAHFLEHLLSTQAAGMFLRKAARIARSFVHVRQPWFDAD HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GYLLSKGLKFYWSDWRGHRNAMTSLDFHKICRDLLAKGEIASFGIYGRGPIADSESEMVI CHHHHHCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCEEE PVDAPFDSQKYVETLGPKPAVGFEIPVFAEILVDIAVVRGAESDANRRALLRRLDMKLPV EECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC VPIIESAGHCWP HHHHHCCCCCCC >Mature Secondary Structure MNEFADLFLPDAEGATSPDYYDFGCSSGGNLAFIAGFLPELKGVGIDINEAKVALAQNRG CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHCCC QEAIVRDILKMPESKQVDFVTMAHFLEHLLSTQAAGMFLRKAARIARSFVHVRQPWFDAD HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GYLLSKGLKFYWSDWRGHRNAMTSLDFHKICRDLLAKGEIASFGIYGRGPIADSESEMVI CHHHHHCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCEEE PVDAPFDSQKYVETLGPKPAVGFEIPVFAEILVDIAVVRGAESDANRRALLRRLDMKLPV EECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC VPIIESAGHCWP HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA