| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198732
Identifier: 87198732
GI number: 87198732
Start: 749075
End: 749500
Strand: Reverse
Name: 87198732
Synonym: Saro_0708
Alternate gene names: NA
Gene position: 749500-749075 (Counterclockwise)
Preceding gene: 87198733
Following gene: 87198730
Centisome position: 21.04
GC content: 64.55
Gene sequence:
>426_bases ATGCGCCGCGCCGTTGCCCTCGCCCTTCTGGCGCTTCTGGGCAACGGCCCCGCTGCTCCGGACAACCGCCGCATCGTCGA GGATTTCGCTCGACTGTTCTACGTCGAACGCGATGTAAAGAAGGCGTTCGAGGCCTACGTCGCGCCGGACTACATCCAGC ACAACCCGGGCGTTCCCGACGGGCGCGACGCCGCGATTGCGCTGCTTCAGCCGATGTTCTCCGACCACACCCGAAGCTTC GAGGTTCGCAAGATCCTGGTCGACGGCGATCTCGCCGCGATCCACATCTTCGCCCGGCCAAACCCCGAGGCGCGTGGCGC TGCGGTCGCGGACTTCTACCGTCTCAAGGACGGCAAGATCGTCGAGCACTGGGACGTGATCCAGCCAATCCCGGAAAAGT CGGCCAATCCACACCCGATGTTCTAG
Upstream 100 bases:
>100_bases CGGCGGGCGAGCACACGCTCACGCTCCAGCAGAAGCTGCGCGTTTCCTATCTGCCCTTCCCGTCGTTCAACAACGACGAG AAGACGGTGAAGGTCGCCTG
Downstream 100 bases:
>100_bases GCAGTCGGCCTGACTGGGTCGATTGCCTAGAACCGTTTGCATCGAGCGAGGCCGAGATGCTGCCTGCCAATCAGGCGGCA GCCTCCTCCTCCAGACCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MRRAVALALLALLGNGPAAPDNRRIVEDFARLFYVERDVKKAFEAYVAPDYIQHNPGVPDGRDAAIALLQPMFSDHTRSF EVRKILVDGDLAAIHIFARPNPEARGAAVADFYRLKDGKIVEHWDVIQPIPEKSANPHPMF
Sequences:
>Translated_141_residues MRRAVALALLALLGNGPAAPDNRRIVEDFARLFYVERDVKKAFEAYVAPDYIQHNPGVPDGRDAAIALLQPMFSDHTRSF EVRKILVDGDLAAIHIFARPNPEARGAAVADFYRLKDGKIVEHWDVIQPIPEKSANPHPMF >Mature_141_residues MRRAVALALLALLGNGPAAPDNRRIVEDFARLFYVERDVKKAFEAYVAPDYIQHNPGVPDGRDAAIALLQPMFSDHTRSF EVRKILVDGDLAAIHIFARPNPEARGAAVADFYRLKDGKIVEHWDVIQPIPEKSANPHPMF
Specific function: Unknown
COG id: COG4922
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15770; Mature: 15770
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAVALALLALLGNGPAAPDNRRIVEDFARLFYVERDVKKAFEAYVAPDYIQHNPGVPD CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC GRDAAIALLQPMFSDHTRSFEVRKILVDGDLAAIHIFARPNPEARGAAVADFYRLKDGKI CCHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCE VEHWDVIQPIPEKSANPHPMF ECCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure MRRAVALALLALLGNGPAAPDNRRIVEDFARLFYVERDVKKAFEAYVAPDYIQHNPGVPD CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC GRDAAIALLQPMFSDHTRSFEVRKILVDGDLAAIHIFARPNPEARGAAVADFYRLKDGKI CCHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCE VEHWDVIQPIPEKSANPHPMF ECCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA