Click here to switch to the map view.

The map label for this gene is 87198730

Identifier: 87198730

GI number: 87198730

Start: 747278

End: 747925

Strand: Reverse

Name: 87198730

Synonym: Saro_0706

Alternate gene names: NA

Gene position: 747925-747278 (Counterclockwise)

Preceding gene: 87198732

Following gene: 87198728

Centisome position: 21.0

GC content: 64.35

Gene sequence:

>648_bases
ATGGCCACGAAGTTGAAAAGCCCTGTGAGCCGAAATCCGGAAGTCGTGCGCGCGCGTATCCTCGATGCAGCGCAGGCCGA
GTTCATGGCCGAAGGCTTTGCCGCCGCGAGCACGAACCGCATTCTCGAACGCTTCGGCGGTTCGAAACCGACCATGTTCC
GCCATTTCCCCACCAAACGCGCCCTGTTCGAGGCTGTCGTCGGTCGCATCGCCGAACGCTGGCGCGATGCGGTAGTCATG
GACGATGCACATGCCGACGACCCGCAAGGCTGGCTCGAACGCTTCGCCCAGCGTGCACTGTCCTGGATACTGACCGACGA
GAGTATCTTCGTGGGGCGCATGGCGATTGCCGAAGGGCACCTGTTTCCAGAAGTGGGCGACACCTACCGCAGGCTCGCCG
TCGATCCCCTGAACGCGCTGGTGGCCGCGCGGCTCGATGCATGGACTCAGGCAGGCATTCTGTCCTGCATGGAACCGGAC
CGCGATGCGCTGTCGTTCTTCGACCTGACGCTGGCCGGAATGGTCAGTCGGCGGCTCTACCGAGTCGAGGCTGGATTCGA
CGAAGCGGCCATCGCCGAACACGCGCGCCGCTGCGCCCGCCTGTTCCTCGACGGATGCCGGCTCAGGCCTTTGCCGACTG
CTCCTTGA

Upstream 100 bases:

>100_bases
TGCGACCAGCACGCCATGTACCAGGCATTGCGAAGGAACACGCTCATCGCCATTCTCCCCGTATGTCGAATCAAACAAAC
CAGTTGGTTTCTTTATAGCG

Downstream 100 bases:

>100_bases
TGGGCTCCATCACCACGAAGGTCGATGTGTTCGCGACATTGGGCAGGGTCGATATCTTTTCGCCGAGGACCGTGCGGAAC
CGCCGGATGTCCGCAGTGCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; Transcription Regulator Protein

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MATKLKSPVSRNPEVVRARILDAAQAEFMAEGFAAASTNRILERFGGSKPTMFRHFPTKRALFEAVVGRIAERWRDAVVM
DDAHADDPQGWLERFAQRALSWILTDESIFVGRMAIAEGHLFPEVGDTYRRLAVDPLNALVAARLDAWTQAGILSCMEPD
RDALSFFDLTLAGMVSRRLYRVEAGFDEAAIAEHARRCARLFLDGCRLRPLPTAP

Sequences:

>Translated_215_residues
MATKLKSPVSRNPEVVRARILDAAQAEFMAEGFAAASTNRILERFGGSKPTMFRHFPTKRALFEAVVGRIAERWRDAVVM
DDAHADDPQGWLERFAQRALSWILTDESIFVGRMAIAEGHLFPEVGDTYRRLAVDPLNALVAARLDAWTQAGILSCMEPD
RDALSFFDLTLAGMVSRRLYRVEAGFDEAAIAEHARRCARLFLDGCRLRPLPTAP
>Mature_214_residues
ATKLKSPVSRNPEVVRARILDAAQAEFMAEGFAAASTNRILERFGGSKPTMFRHFPTKRALFEAVVGRIAERWRDAVVMD
DAHADDPQGWLERFAQRALSWILTDESIFVGRMAIAEGHLFPEVGDTYRRLAVDPLNALVAARLDAWTQAGILSCMEPDR
DALSFFDLTLAGMVSRRLYRVEAGFDEAAIAEHARRCARLFLDGCRLRPLPTAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24019; Mature: 23888

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKLKSPVSRNPEVVRARILDAAQAEFMAEGFAAASTNRILERFGGSKPTMFRHFPTKR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHH
ALFEAVVGRIAERWRDAVVMDDAHADDPQGWLERFAQRALSWILTDESIFVGRMAIAEGH
HHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
LFPEVGDTYRRLAVDPLNALVAARLDAWTQAGILSCMEPDRDALSFFDLTLAGMVSRRLY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RVEAGFDEAAIAEHARRCARLFLDGCRLRPLPTAP
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ATKLKSPVSRNPEVVRARILDAAQAEFMAEGFAAASTNRILERFGGSKPTMFRHFPTKR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHH
ALFEAVVGRIAERWRDAVVMDDAHADDPQGWLERFAQRALSWILTDESIFVGRMAIAEGH
HHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
LFPEVGDTYRRLAVDPLNALVAARLDAWTQAGILSCMEPDRDALSFFDLTLAGMVSRRLY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RVEAGFDEAAIAEHARRCARLFLDGCRLRPLPTAP
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA