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The map label for this gene is 87198633

Identifier: 87198633

GI number: 87198633

Start: 656203

End: 656679

Strand: Reverse

Name: 87198633

Synonym: Saro_0609

Alternate gene names: NA

Gene position: 656679-656203 (Counterclockwise)

Preceding gene: 87198634

Following gene: 87198632

Centisome position: 18.44

GC content: 67.3

Gene sequence:

>477_bases
GTGACCACCGAACCTTCAAGCCTTGCCCGGCTCTCGATGAGCCTGCCCGGCGAACTCTTCCGCCAGCTCGACATGATGGT
CGAGGAACGCGGCCTGCCTTCCCGCTCGCAGCTTATTGCGGAACTGATCCGCCATGCCCTGGCCGAGCACGAGGCCTACA
CCCGGCCCGACGAGATGCTCGCCGGTACGATCACCATCGTCTACCGCGGCGACCGGGGCCGCGTGCGTCACCAGCTCGCA
CAGACCCAGGCCGACTACCTCAAGGAGGTCATCTCCTCCCAGCATGTCTTCCTCGAGGATGACCAGTCGCTCGAGGTCCT
GCTCGTGCAGGGGCCGGCGGTACGCCTCAAGGAACTGTGCGATGCCCTGCGCCGGGTGCGCGGGGTGCACCAGCTCAAGC
TCGTCACCACGACCGCCCTCCTGCCGCCGCTCTACGAGCCGGATGCGGGCGAAAGCAGCAACGGAGCCGCCGCATGA

Upstream 100 bases:

>100_bases
GTCTACGACCTGGCCCTGCGCAAGGACACGGACGCCGCACCCGGCGCAGCCGCACCCGCAATCCCCGCCCAAGACGTTCA
CATCCACGAGGGGGCCTGAC

Downstream 100 bases:

>100_bases
GCGCGACACTCGCCAATCCACTCGCAGCCCGCGATCACGCCCGCGCCATGGCCGGCACCGTGGTCGAGGCCATGCCGGTC
CTGCCGCCCGTCGCCAAAGA

Product: CopG family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTTEPSSLARLSMSLPGELFRQLDMMVEERGLPSRSQLIAELIRHALAEHEAYTRPDEMLAGTITIVYRGDRGRVRHQLA
QTQADYLKEVISSQHVFLEDDQSLEVLLVQGPAVRLKELCDALRRVRGVHQLKLVTTTALLPPLYEPDAGESSNGAAA

Sequences:

>Translated_158_residues
MTTEPSSLARLSMSLPGELFRQLDMMVEERGLPSRSQLIAELIRHALAEHEAYTRPDEMLAGTITIVYRGDRGRVRHQLA
QTQADYLKEVISSQHVFLEDDQSLEVLLVQGPAVRLKELCDALRRVRGVHQLKLVTTTALLPPLYEPDAGESSNGAAA
>Mature_157_residues
TTEPSSLARLSMSLPGELFRQLDMMVEERGLPSRSQLIAELIRHALAEHEAYTRPDEMLAGTITIVYRGDRGRVRHQLAQ
TQADYLKEVISSQHVFLEDDQSLEVLLVQGPAVRLKELCDALRRVRGVHQLKLVTTTALLPPLYEPDAGESSNGAAA

Specific function: Transcriptional regulator (Potential) [H]

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory CopG/NikR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013321
- InterPro:   IPR002145
- InterPro:   IPR022988
- InterPro:   IPR010985
- InterPro:   IPR014864 [H]

Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1 [H]

EC number: NA

Molecular weight: Translated: 17573; Mature: 17442

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEPSSLARLSMSLPGELFRQLDMMVEERGLPSRSQLIAELIRHALAEHEAYTRPDEML
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
AGTITIVYRGDRGRVRHQLAQTQADYLKEVISSQHVFLEDDQSLEVLLVQGPAVRLKELC
HEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHHHHHH
DALRRVRGVHQLKLVTTTALLPPLYEPDAGESSNGAAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTEPSSLARLSMSLPGELFRQLDMMVEERGLPSRSQLIAELIRHALAEHEAYTRPDEML
CCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
AGTITIVYRGDRGRVRHQLAQTQADYLKEVISSQHVFLEDDQSLEVLLVQGPAVRLKELC
HEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHHHHHH
DALRRVRGVHQLKLVTTTALLPPLYEPDAGESSNGAAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA