| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198585
Identifier: 87198585
GI number: 87198585
Start: 610390
End: 611001
Strand: Reverse
Name: 87198585
Synonym: Saro_0561
Alternate gene names: NA
Gene position: 611001-610390 (Counterclockwise)
Preceding gene: 87198586
Following gene: 87198584
Centisome position: 17.16
GC content: 64.54
Gene sequence:
>612_bases ATGGCGGGGGCTATCGAGGATCGCAGGCCAAGCCTGCTTTCGCAGGCGGTACGCAAGGCGCTGGTCCTTTTCTACAGGAT GCGCGGCTGGAAGGCGGTGGGCACCCCTCCCGAAGATGGTCGTTGCATCATCATCGCCGCGCCCCACACCTCGAACTGGG ACTTTCTCTACTTCATCGGACTGACCGAAGACCTCGGCCTGCGCCCGCATTTCATGGCCAAGGACAGTCTGTTCCGCTGG CCGCTGGGCGGTTTCATGCGCGACATGGGCGGCGTTGCCATCGATCGTTCGGCCCGCCGCAACGTGGTCGACGCGATGGT GGCAGAATTCGCGCGCCGCGACCGCTTCATGTTGACCATCGCGCCCGAAGGCACGCGCGGCAAGGTGGGCGAATGGCGCA CCGGCTTCTACCAGATCGCGCTGCGGGCCAAGGTCCCGATGTACGTCGGGCTGATGGACTATGGCACCAAGACCGGGGGC CTTGGTCCGGCGATCTGGCCAACCGGAGATTACGATGCCGACATGGCGCGGATCTTCGAGGTCTATCGATCGGTCACGCC CAAGCACCCGGAACGCGGGCTGACGAAGCTGCCGGAGAAAGCTGATGGCTGA
Upstream 100 bases:
>100_bases GCATGGCCGCATGGCCCGACGCAGGCGAGGAGGCAGCCACCCCGATGGGCAGTTAGACAGCGCCCCGGTCCCGCGTTATC GTCGCTGCGGGGAGACGGAT
Downstream 100 bases:
>100_bases AGCGCTTCTGGTGAACCTGGTGGTTCTCGTGCTGGGCATGCTGGCGCTGTGGCGCGTGGCGGTGCGCATCGACGATGTCA GCTTCATCGACGCCGTCTGG
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: Acyltransferase; Acyltransferase Family Protein; 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferase; Acyltransferase Domain Protein; Pseudouridine Synthase RluD; Acyltransferase Protein; Acetyltransferase; 1-Acylglycerol-3-Phosphate O-Acyltransferase; PlsC Phosphate Acyltransferases
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MAGAIEDRRPSLLSQAVRKALVLFYRMRGWKAVGTPPEDGRCIIIAAPHTSNWDFLYFIGLTEDLGLRPHFMAKDSLFRW PLGGFMRDMGGVAIDRSARRNVVDAMVAEFARRDRFMLTIAPEGTRGKVGEWRTGFYQIALRAKVPMYVGLMDYGTKTGG LGPAIWPTGDYDADMARIFEVYRSVTPKHPERGLTKLPEKADG
Sequences:
>Translated_203_residues MAGAIEDRRPSLLSQAVRKALVLFYRMRGWKAVGTPPEDGRCIIIAAPHTSNWDFLYFIGLTEDLGLRPHFMAKDSLFRW PLGGFMRDMGGVAIDRSARRNVVDAMVAEFARRDRFMLTIAPEGTRGKVGEWRTGFYQIALRAKVPMYVGLMDYGTKTGG LGPAIWPTGDYDADMARIFEVYRSVTPKHPERGLTKLPEKADG >Mature_202_residues AGAIEDRRPSLLSQAVRKALVLFYRMRGWKAVGTPPEDGRCIIIAAPHTSNWDFLYFIGLTEDLGLRPHFMAKDSLFRWP LGGFMRDMGGVAIDRSARRNVVDAMVAEFARRDRFMLTIAPEGTRGKVGEWRTGFYQIALRAKVPMYVGLMDYGTKTGGL GPAIWPTGDYDADMARIFEVYRSVTPKHPERGLTKLPEKADG
Specific function: Unknown
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22787; Mature: 22656
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAIEDRRPSLLSQAVRKALVLFYRMRGWKAVGTPPEDGRCIIIAAPHTSNWDFLYFIG CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEECCCCCCCCEEEEEE LTEDLGLRPHFMAKDSLFRWPLGGFMRDMGGVAIDRSARRNVVDAMVAEFARRDRFMLTI CCCCCCCCCCEECCCCCHHCCHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHCCCEEEEE APEGTRGKVGEWRTGFYQIALRAKVPMYVGLMDYGTKTGGLGPAIWPTGDYDADMARIFE CCCCCCCCCCCCCCCEEEEEEEECCCEEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH VYRSVTPKHPERGLTKLPEKADG HHHHCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure AGAIEDRRPSLLSQAVRKALVLFYRMRGWKAVGTPPEDGRCIIIAAPHTSNWDFLYFIG CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEECCCCCCCCEEEEEE LTEDLGLRPHFMAKDSLFRWPLGGFMRDMGGVAIDRSARRNVVDAMVAEFARRDRFMLTI CCCCCCCCCCEECCCCCHHCCHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHCCCEEEEE APEGTRGKVGEWRTGFYQIALRAKVPMYVGLMDYGTKTGGLGPAIWPTGDYDADMARIFE CCCCCCCCCCCCCCCEEEEEEEECCCEEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH VYRSVTPKHPERGLTKLPEKADG HHHHCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA