| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198580
Identifier: 87198580
GI number: 87198580
Start: 605947
End: 606336
Strand: Reverse
Name: 87198580
Synonym: Saro_0556
Alternate gene names: NA
Gene position: 606336-605947 (Counterclockwise)
Preceding gene: 87198582
Following gene: 87198574
Centisome position: 17.02
GC content: 68.97
Gene sequence:
>390_bases ATGTCGATCCATGGGCGGTCAAGAAGGCAACGCAGCCATGACGCGAAGGAAACGCCCATGACATCGCCATCCTCGCGCAA CCGCATAGCGGCGTGGGTCTTCGGCGCCAGCGTTCTGCTGACTGCGGCGCTCATCGCCAGCCAGGTCGCCAGCGAAGACA AGGTCGCCCCCGAGCCGAGCGCGACCGCCGAAGCCGCCGCCGGGCCTGTGTTCGACGAATGGGCGAAGGACGCGCCCGAT CCCGACGAGGGCAAGGGCAAGCTGATCGGCCATGTCGAGCGCGACGGGCAGATGATCGAGGTCCGGCAGTTGCCACCGGA CCAGGACCCCGACGCCGCGGACGATCCGGCGCTGGTCGAACCGGGCTCTGCGGACCAGCCCTCGCCCTAG
Upstream 100 bases:
>100_bases TGGCGCGCGCTCTGGTGGGGCGCGTCCATCCTGATCTTCGCGTGGTCGGTGGTGCCGAACCCGGACGAACAACCGGTCGA CCAGAAACCGAAGCCCGCAC
Downstream 100 bases:
>100_bases GCCGTAAACTCATAAAGGGCGCCATCGAGGTTTGAGGCAAAACGGCCAGGTGCAAGGAAGGAGGGCGCAGGAATATGTCG ATATTTCAAGCCCGACTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSIHGRSRRQRSHDAKETPMTSPSSRNRIAAWVFGASVLLTAALIASQVASEDKVAPEPSATAEAAAGPVFDEWAKDAPD PDEGKGKLIGHVERDGQMIEVRQLPPDQDPDAADDPALVEPGSADQPSP
Sequences:
>Translated_129_residues MSIHGRSRRQRSHDAKETPMTSPSSRNRIAAWVFGASVLLTAALIASQVASEDKVAPEPSATAEAAAGPVFDEWAKDAPD PDEGKGKLIGHVERDGQMIEVRQLPPDQDPDAADDPALVEPGSADQPSP >Mature_128_residues SIHGRSRRQRSHDAKETPMTSPSSRNRIAAWVFGASVLLTAALIASQVASEDKVAPEPSATAEAAAGPVFDEWAKDAPDP DEGKGKLIGHVERDGQMIEVRQLPPDQDPDAADDPALVEPGSADQPSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13646; Mature: 13515
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIHGRSRRQRSHDAKETPMTSPSSRNRIAAWVFGASVLLTAALIASQVASEDKVAPEPS CCCCCCCHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ATAEAAAGPVFDEWAKDAPDPDEGKGKLIGHVERDGQMIEVRQLPPDQDPDAADDPALVE CCCHHHCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEC PGSADQPSP CCCCCCCCC >Mature Secondary Structure SIHGRSRRQRSHDAKETPMTSPSSRNRIAAWVFGASVLLTAALIASQVASEDKVAPEPS CCCCCCHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ATAEAAAGPVFDEWAKDAPDPDEGKGKLIGHVERDGQMIEVRQLPPDQDPDAADDPALVE CCCHHHCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEC PGSADQPSP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA