| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is cpg2 [H]
Identifier: 87198263
GI number: 87198263
Start: 246695
End: 248005
Strand: Direct
Name: cpg2 [H]
Synonym: Saro_0238
Alternate gene names: 87198263
Gene position: 246695-248005 (Clockwise)
Preceding gene: 87198248
Following gene: 87198264
Centisome position: 6.93
GC content: 66.9
Gene sequence:
>1311_bases ATGCGTTTGCCGATGGGTCTGGTTGCCGTTCTCGCGCTCGTCGGAACCGCCGCACATGCAGCGCCCAAGGGTGCCGAGGC ACGCATGATTGCCACCGTCGATGCCGAGCAGGCGCGCACGTTGAGGTTCCTCGAAGTGATGGTCAACCAGAACTCGGGCA GCCGCAACCTCGAAGGCGTGCGAAGGTTGCGCGACATTGTCGTGCCCGAATTCACCGCGCTGGGCTTCACGTCCCGCTGG ATCCCGATGGAACGGACCGGCCGGGCCGGGCACCTCGTCCTCACCCACAAGGGCCGCCAAGGCGCGAAGAAGCTTCTGCT GATCGGCCACCTCGATACCGTGTTCGAACCTGACTCCCCCTTCCAGACCTATGTCCTGAACGGCGAAAAGGCGACCGGCC CTGGCGTCGGCGATGACAAGGGTGGCATCGCCGTGATCCTCGCTGCGGTCCGCGCCATGAACGCTGCAGGAACGCTGAAG GGCGCCAGCATCGAAGTCTTCCTTACCGGCGACGAAGAGGAGGCAGGCTCTCCCACCGAAGTCGCCCGCGCCGATCTCGT TGCCGCCGCCAGGGCCGCCGACGTCGCGCTGGATTTCGAAGGCCTCTCCAGAGAGAACGGCCGCGACATGGGCTCGATCG CCCGCCGATCCTCGCAAAGCTGGTCTTTGACGGTCGAGGCGAAGTCCGGCCACTCCAGCGGCGTCTGGGGCGCAAACGCG GGCGATGGCGCGATCTATGCCGCCGCGAAGATCGTGAATGCCTTCCGCACCGAACTGCCCGAACCCTGGCTTACCCTCAA CGTCGGCCTGATCGCGGGCGGGGCGGAGGCAGAGGTCGCCGAGGACAACGCCCACGTCTCGGCACAGGGCAAGACCAATA TCATACCGGGCGAGGTCATCGCCCGCGGAGACCTGCGCACCCTCAGTCCCGAACAGAACCGCGCCGCCATGCGCAAGATG GAGGAGATCGTCGGCAGGCCCTACCCCGGCGTCACCTCAGCCCGCATCGCATTTAGCGAAGGCTACCCGCCCATGGCCCC GACCGAAGGCAACAAGGCGTTGCTGGCCCGCCTGAATCAGGTCAACGCCACGCTTGGCTTGCCCGAAATGCAGCCGCTCG ATCCGATGAAGCGCGGGGCCGGGGACATCAGCTTCGTCGCGGAATACATCGACGGCCTCGTCGGCCTCGGCCCGCACTCC ACCGGCGATCACGCGCCGGGCGAAACGGTCGACGTCCCCAGCATCTGGACCCAGGCCAAGCGCGCCGCCCTGCTGATGAC CCGGCTCTCGGCGGAGAAGTCCGCGCGGTGA
Upstream 100 bases:
>100_bases CACATAGGAGCGCCTCCGCAACAAGGCAAGGAAATTCGGGCAAAAGGCGGTTGCATCACCGCATGCGCGCCGCCAACGTG CCCGCAAAAGGAGTGGGTCG
Downstream 100 bases:
>100_bases GCGAAACGCACCCGCCCAGTCCCTGCACCGGCGTCTGCGAGATCGACCGGGTCACCGCCACCTGTCGCGGCTGTCACCGC ACGCTCGACGAAATCACCGC
Product: peptidase M20
Products: NA
Alternate protein names: CPDG2; Folate hydrolase G2; Glutamate carboxypeptidase; Pteroylmonoglutamic acid hydrolase G2; Glucarpidase [H]
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MRLPMGLVAVLALVGTAAHAAPKGAEARMIATVDAEQARTLRFLEVMVNQNSGSRNLEGVRRLRDIVVPEFTALGFTSRW IPMERTGRAGHLVLTHKGRQGAKKLLLIGHLDTVFEPDSPFQTYVLNGEKATGPGVGDDKGGIAVILAAVRAMNAAGTLK GASIEVFLTGDEEEAGSPTEVARADLVAAARAADVALDFEGLSRENGRDMGSIARRSSQSWSLTVEAKSGHSSGVWGANA GDGAIYAAAKIVNAFRTELPEPWLTLNVGLIAGGAEAEVAEDNAHVSAQGKTNIIPGEVIARGDLRTLSPEQNRAAMRKM EEIVGRPYPGVTSARIAFSEGYPPMAPTEGNKALLARLNQVNATLGLPEMQPLDPMKRGAGDISFVAEYIDGLVGLGPHS TGDHAPGETVDVPSIWTQAKRAALLMTRLSAEKSAR
Sequences:
>Translated_436_residues MRLPMGLVAVLALVGTAAHAAPKGAEARMIATVDAEQARTLRFLEVMVNQNSGSRNLEGVRRLRDIVVPEFTALGFTSRW IPMERTGRAGHLVLTHKGRQGAKKLLLIGHLDTVFEPDSPFQTYVLNGEKATGPGVGDDKGGIAVILAAVRAMNAAGTLK GASIEVFLTGDEEEAGSPTEVARADLVAAARAADVALDFEGLSRENGRDMGSIARRSSQSWSLTVEAKSGHSSGVWGANA GDGAIYAAAKIVNAFRTELPEPWLTLNVGLIAGGAEAEVAEDNAHVSAQGKTNIIPGEVIARGDLRTLSPEQNRAAMRKM EEIVGRPYPGVTSARIAFSEGYPPMAPTEGNKALLARLNQVNATLGLPEMQPLDPMKRGAGDISFVAEYIDGLVGLGPHS TGDHAPGETVDVPSIWTQAKRAALLMTRLSAEKSAR >Mature_436_residues MRLPMGLVAVLALVGTAAHAAPKGAEARMIATVDAEQARTLRFLEVMVNQNSGSRNLEGVRRLRDIVVPEFTALGFTSRW IPMERTGRAGHLVLTHKGRQGAKKLLLIGHLDTVFEPDSPFQTYVLNGEKATGPGVGDDKGGIAVILAAVRAMNAAGTLK GASIEVFLTGDEEEAGSPTEVARADLVAAARAADVALDFEGLSRENGRDMGSIARRSSQSWSLTVEAKSGHSSGVWGANA GDGAIYAAAKIVNAFRTELPEPWLTLNVGLIAGGAEAEVAEDNAHVSAQGKTNIIPGEVIARGDLRTLSPEQNRAAMRKM EEIVGRPYPGVTSARIAFSEGYPPMAPTEGNKALLARLNQVNATLGLPEMQPLDPMKRGAGDISFVAEYIDGLVGLGPHS TGDHAPGETVDVPSIWTQAKRAALLMTRLSAEKSAR
Specific function: Catalyzes the hydrolysis of reduced and non-reduced folates to pteroates and L-glutamate. This enzyme has a broad specificity [H]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001261 - InterPro: IPR017150 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.4.17.11 [H]
Molecular weight: Translated: 45945; Mature: 45945
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00758 ARGE_DAPE_CPG2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPMGLVAVLALVGTAAHAAPKGAEARMIATVDAEQARTLRFLEVMVNQNSGSRNLEGV CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHH RRLRDIVVPEFTALGFTSRWIPMERTGRAGHLVLTHKGRQGAKKLLLIGHLDTVFEPDSP HHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCHHHCCCCCC FQTYVLNGEKATGPGVGDDKGGIAVILAAVRAMNAAGTLKGASIEVFLTGDEEEAGSPTE CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHH VARADLVAAARAADVALDFEGLSRENGRDMGSIARRSSQSWSLTVEAKSGHSSGVWGANA HHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCC GDGAIYAAAKIVNAFRTELPEPWLTLNVGLIAGGAEAEVAEDNAHVSAQGKTNIIPGEVI CCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEECCCCCEEEECCCCCCCCCCEE ARGDLRTLSPEQNRAAMRKMEEIVGRPYPGVTSARIAFSEGYPPMAPTEGNKALLARLNQ ECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH VNATLGLPEMQPLDPMKRGAGDISFVAEYIDGLVGLGPHSTGDHAPGETVDVPSIWTQAK HHHEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH RAALLMTRLSAEKSAR HHHHHHHHHHHHHCCC >Mature Secondary Structure MRLPMGLVAVLALVGTAAHAAPKGAEARMIATVDAEQARTLRFLEVMVNQNSGSRNLEGV CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHH RRLRDIVVPEFTALGFTSRWIPMERTGRAGHLVLTHKGRQGAKKLLLIGHLDTVFEPDSP HHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCHHHCCCCCC FQTYVLNGEKATGPGVGDDKGGIAVILAAVRAMNAAGTLKGASIEVFLTGDEEEAGSPTE CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHH VARADLVAAARAADVALDFEGLSRENGRDMGSIARRSSQSWSLTVEAKSGHSSGVWGANA HHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCC GDGAIYAAAKIVNAFRTELPEPWLTLNVGLIAGGAEAEVAEDNAHVSAQGKTNIIPGEVI CCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEECCCCCEEEECCCCCCCCCCEE ARGDLRTLSPEQNRAAMRKMEEIVGRPYPGVTSARIAFSEGYPPMAPTEGNKALLARLNQ ECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH VNATLGLPEMQPLDPMKRGAGDISFVAEYIDGLVGLGPHSTGDHAPGETVDVPSIWTQAK HHHEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH RAALLMTRLSAEKSAR HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6396165; 3838935; 9083113 [H]