| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is linC [H]
Identifier: 87198245
GI number: 87198245
Start: 229503
End: 230840
Strand: Direct
Name: linC [H]
Synonym: Saro_0220
Alternate gene names: 87198245
Gene position: 229503-230840 (Clockwise)
Preceding gene: 87198244
Following gene: 87198246
Centisome position: 6.44
GC content: 64.8
Gene sequence:
>1338_bases ATGGCAACCCAGCTTGCGCCCGAAGTGCCGCAATTCACCTACCATTCCTCGCCCACCGCGACCGAAGCGTTCGCGGCCTG GCTGAAGGACAATCCGCAGGCCATTCCGGCGCATTCCCATCCCTGGGACGTCAGCCGCTCGGACATCTATGTCGAGGATC GCTGGCAACCGATCTTTGCCGAGATGCGGGCGAAGGCGCCGGTCAATCGCGTGCCGGATTCGCCTTACGGGGCCTATTGG AACGTCGCCAGCCACAAGGCGATCATGCACGTCGAATCGCTGCCCGAACTGTTCTCGTCTTCCTGGCAGTACGGCGGCAT CACCATCGGCGACCCGCCGGAAGATGTCGATCCGCAGAAGCTGGCCGAACGGCAGCTTCCCATGTTCATCGCGATGGACC GGCCCGATCACACCGGCCAGCGCCGCACCGTGGCCCCGGCCTTCACCCCGGCCAAGATGGTCGAGATGGAAGCCGAGATC CGCCGTCGCACCGCAAGCGTGCTCGATTCGCTGCCGTGGGGCGAACGATTCGACTGGGTCGACAAGGTCTCGATCGAACT GACCACGGGCATGCTCGCGATCCTGTTCGGCTTCCCCTGGGCCGACCGCCGTCTCCTGACCTTCTGGTCGGACTGGGCCG GCGACGTCGAGCTGACCCTCGCGCGCGAACTTGCCGACACGCGCTTTGGCTTCCTCGGAGAGATGGCGCACTATTTCCAG CGCCTGTGGGGAGCGCGGATGCAGGCGCCTCCTTCGGGCGATCTCATCTCGATGATGATCCACTCCGAGGCGATGAACCA CATGAGCCCGCAGGAGTTCATGGGCAATCTCGTGCTGCTGATCGTCGGTGGCAACGACACCACCCGCAATACCATGTCGG GCATCGTCCACGCGCTCGACAAGTTCCCCGACCAGCGCGAACTGCTGGAGCGCGATGCCTCGCTCATCCCCAACGCCGTG CAGGAATGCATCCGCTACGTCACCCCGCTCGCGCACATGCGCCGCACGGCGACTGCCGATACCGAGCTTTTCGGCAACCA GATCAAGGCGGGCGAGAAGGTCATCCTGTGGTACATCTCGGCCAACCGCGACGAGACCGTGTTCGAGAATCCGGACAAGC TGATGGTCGACCGGCCCAATGCGCGACGTCACCTGTCGTTCGGCCACGGCATCCATCGCTGCGTCGGCGCGCGCCTTGCC GAACTGCAACTGCGCATCCTGCTCGAGGAAATGCACGAGCGGCGCATGCGCGTGCGCGTGGCGGGCGAGGTGGAGCGCGT GCGCGCCAACTTCGTCCACGGCTTCCGCAAGCTGGAAGTGGAACTGGAGAAGCGCTAG
Upstream 100 bases:
>100_bases GAGGCGAGCGCAAGCCTTATTGACATCCTTGTAGGTTGTGGCAGGCTGCCAGAGTGACGCGGACCGCGCATCAAGCGCGG CTGTGCCCGGAGGATAGCCC
Downstream 100 bases:
>100_bases ATCGCAGGCTATGATCTGCGTCACGATCGGGCCGGGCAGGTTGGTCTAGGCAGGGACAAGTCCTGCCGGTTGGCCAGCCG CCGCTCTAGGTACTCGCCCT
Product: cytochrome P450
Products: NA
Alternate protein names: Cytochrome P450 111; Cytochrome P450lin [H]
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MATQLAPEVPQFTYHSSPTATEAFAAWLKDNPQAIPAHSHPWDVSRSDIYVEDRWQPIFAEMRAKAPVNRVPDSPYGAYW NVASHKAIMHVESLPELFSSSWQYGGITIGDPPEDVDPQKLAERQLPMFIAMDRPDHTGQRRTVAPAFTPAKMVEMEAEI RRRTASVLDSLPWGERFDWVDKVSIELTTGMLAILFGFPWADRRLLTFWSDWAGDVELTLARELADTRFGFLGEMAHYFQ RLWGARMQAPPSGDLISMMIHSEAMNHMSPQEFMGNLVLLIVGGNDTTRNTMSGIVHALDKFPDQRELLERDASLIPNAV QECIRYVTPLAHMRRTATADTELFGNQIKAGEKVILWYISANRDETVFENPDKLMVDRPNARRHLSFGHGIHRCVGARLA ELQLRILLEEMHERRMRVRVAGEVERVRANFVHGFRKLEVELEKR
Sequences:
>Translated_445_residues MATQLAPEVPQFTYHSSPTATEAFAAWLKDNPQAIPAHSHPWDVSRSDIYVEDRWQPIFAEMRAKAPVNRVPDSPYGAYW NVASHKAIMHVESLPELFSSSWQYGGITIGDPPEDVDPQKLAERQLPMFIAMDRPDHTGQRRTVAPAFTPAKMVEMEAEI RRRTASVLDSLPWGERFDWVDKVSIELTTGMLAILFGFPWADRRLLTFWSDWAGDVELTLARELADTRFGFLGEMAHYFQ RLWGARMQAPPSGDLISMMIHSEAMNHMSPQEFMGNLVLLIVGGNDTTRNTMSGIVHALDKFPDQRELLERDASLIPNAV QECIRYVTPLAHMRRTATADTELFGNQIKAGEKVILWYISANRDETVFENPDKLMVDRPNARRHLSFGHGIHRCVGARLA ELQLRILLEEMHERRMRVRVAGEVERVRANFVHGFRKLEVELEKR >Mature_444_residues ATQLAPEVPQFTYHSSPTATEAFAAWLKDNPQAIPAHSHPWDVSRSDIYVEDRWQPIFAEMRAKAPVNRVPDSPYGAYWN VASHKAIMHVESLPELFSSSWQYGGITIGDPPEDVDPQKLAERQLPMFIAMDRPDHTGQRRTVAPAFTPAKMVEMEAEIR RRTASVLDSLPWGERFDWVDKVSIELTTGMLAILFGFPWADRRLLTFWSDWAGDVELTLARELADTRFGFLGEMAHYFQR LWGARMQAPPSGDLISMMIHSEAMNHMSPQEFMGNLVLLIVGGNDTTRNTMSGIVHALDKFPDQRELLERDASLIPNAVQ ECIRYVTPLAHMRRTATADTELFGNQIKAGEKVILWYISANRDETVFENPDKLMVDRPNARRHLSFGHGIHRCVGARLAE LQLRILLEEMHERRMRVRVAGEVERVRANFVHGFRKLEVELEKR
Specific function: Catalyzes the 8-methyl hydroxylation of linalool [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: =1.14.99.28 [H]
Molecular weight: Translated: 50867; Mature: 50736
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATQLAPEVPQFTYHSSPTATEAFAAWLKDNPQAIPAHSHPWDVSRSDIYVEDRWQPIFA CCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHH EMRAKAPVNRVPDSPYGAYWNVASHKAIMHVESLPELFSSSWQYGGITIGDPPEDVDPQK HHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHH LAERQLPMFIAMDRPDHTGQRRTVAPAFTPAKMVEMEAEIRRRTASVLDSLPWGERFDWV HHHHCCCEEEEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH DKVSIELTTGMLAILFGFPWADRRLLTFWSDWAGDVELTLARELADTRFGFLGEMAHYFQ HHEEEEHHHHHHHHHHCCCCCCCHHHEEHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH RLWGARMQAPPSGDLISMMIHSEAMNHMSPQEFMGNLVLLIVGGNDTTRNTMSGIVHALD HHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHH KFPDQRELLERDASLIPNAVQECIRYVTPLAHMRRTATADTELFGNQIKAGEKVILWYIS HCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHCCCCEEEEEEEE ANRDETVFENPDKLMVDRPNARRHLSFGHGIHRCVGARLAELQLRILLEEMHERRMRVRV CCCCCCCCCCCCEEEEECCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGEVERVRANFVHGFRKLEVELEKR HHHHHHHHHHHHHHHHHEEEEECCC >Mature Secondary Structure ATQLAPEVPQFTYHSSPTATEAFAAWLKDNPQAIPAHSHPWDVSRSDIYVEDRWQPIFA CCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHH EMRAKAPVNRVPDSPYGAYWNVASHKAIMHVESLPELFSSSWQYGGITIGDPPEDVDPQK HHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHH LAERQLPMFIAMDRPDHTGQRRTVAPAFTPAKMVEMEAEIRRRTASVLDSLPWGERFDWV HHHHCCCEEEEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH DKVSIELTTGMLAILFGFPWADRRLLTFWSDWAGDVELTLARELADTRFGFLGEMAHYFQ HHEEEEHHHHHHHHHHCCCCCCCHHHEEHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH RLWGARMQAPPSGDLISMMIHSEAMNHMSPQEFMGNLVLLIVGGNDTTRNTMSGIVHALD HHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHH KFPDQRELLERDASLIPNAVQECIRYVTPLAHMRRTATADTELFGNQIKAGEKVILWYIS HCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHCCCCEEEEEEEE ANRDETVFENPDKLMVDRPNARRHLSFGHGIHRCVGARLAELQLRILLEEMHERRMRVRV CCCCCCCCCCCCEEEEECCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGEVERVRANFVHGFRKLEVELEKR HHHHHHHHHHHHHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8376348; 2295633; 3813557; 2578028; 1610873; 12237225 [H]