| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198192
Identifier: 87198192
GI number: 87198192
Start: 164436
End: 165092
Strand: Direct
Name: 87198192
Synonym: Saro_0166
Alternate gene names: NA
Gene position: 164436-165092 (Clockwise)
Preceding gene: 87198191
Following gene: 87198198
Centisome position: 4.62
GC content: 63.62
Gene sequence:
>657_bases TTGGCCCACATCGACGACCAGTTGCCGCCCCAGGATGGGCCCGACAGCGCGGAACAGCGCACGGCACCGCGATTCACCTT GCTCATTCGCGCCGCCAAGCTGATCGTCGACGACGAGCGCGAGTTTCTCTGTGTCATCCGCGATGCTTCCATTTCGGGGC TGAAGATAAGGCTTTTCAATCCTTTGCCGGATCACAAGTCGTTGCGCATCGAGATGAGCAACGGCGACCGCTATGCCGTC GAGCAGGTCTGGGCCGATGGCGAGTATGCCGGCCTCCAGTTCCTCGATGAAGTCGGCATCGAACGATTGCTCGACGAAAG CCATGGCCCCTTTCCGAAGCGCCAGGTTCGCCTGCGTATCCGCCTCGACGCCGTCCTCCATTCCGGCGGCGAGGCGGTGC GCGTCGCGTTTCAGGACATTTCGCAGCAGGGCGCGGGCATCGAGTGCGACAAGTGGCTGCTGATGAACGAACTGGTGCGC GTGGAAACCGGGGTACTGCCGCCGATCTACGCGAAGGTGCGCTGGCGCAGCCACCCCCGTTACGGCCTGCTGTTCGAACA GACGTTCAAGCTGGACGAATTGGCACGCATTGCCGCGCCCTTGCAGACTGGCGACGCGCAGGTGGCAGGGCGGGCGGCAA ATTCGCGCACGGCCTGA
Upstream 100 bases:
>100_bases CTTCGTGGTAACCCGGTGGTAGGACTTCCGGCGTTATGGTCCAGCTTGACCGGATTGCTTTTCGTCCGGCGTCTTGGCTT GTTGCGAGGGGGACAGGGGC
Downstream 100 bases:
>100_bases ACGGCCGCTTTGCCGCCCGGACTGTCTCAGGTTGCGGCGGACAGTGCCTCGTAACGATCGACGAACGGGGCGAGATGCAG GCGGTAGGCACCTGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MAHIDDQLPPQDGPDSAEQRTAPRFTLLIRAAKLIVDDEREFLCVIRDASISGLKIRLFNPLPDHKSLRIEMSNGDRYAV EQVWADGEYAGLQFLDEVGIERLLDESHGPFPKRQVRLRIRLDAVLHSGGEAVRVAFQDISQQGAGIECDKWLLMNELVR VETGVLPPIYAKVRWRSHPRYGLLFEQTFKLDELARIAAPLQTGDAQVAGRAANSRTA
Sequences:
>Translated_218_residues MAHIDDQLPPQDGPDSAEQRTAPRFTLLIRAAKLIVDDEREFLCVIRDASISGLKIRLFNPLPDHKSLRIEMSNGDRYAV EQVWADGEYAGLQFLDEVGIERLLDESHGPFPKRQVRLRIRLDAVLHSGGEAVRVAFQDISQQGAGIECDKWLLMNELVR VETGVLPPIYAKVRWRSHPRYGLLFEQTFKLDELARIAAPLQTGDAQVAGRAANSRTA >Mature_217_residues AHIDDQLPPQDGPDSAEQRTAPRFTLLIRAAKLIVDDEREFLCVIRDASISGLKIRLFNPLPDHKSLRIEMSNGDRYAVE QVWADGEYAGLQFLDEVGIERLLDESHGPFPKRQVRLRIRLDAVLHSGGEAVRVAFQDISQQGAGIECDKWLLMNELVRV ETGVLPPIYAKVRWRSHPRYGLLFEQTFKLDELARIAAPLQTGDAQVAGRAANSRTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24507; Mature: 24376
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHIDDQLPPQDGPDSAEQRTAPRFTLLIRAAKLIVDDEREFLCVIRDASISGLKIRLFN CCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHEECCCEEEEEEECCCCCCEEEEEEC PLPDHKSLRIEMSNGDRYAVEQVWADGEYAGLQFLDEVGIERLLDESHGPFPKRQVRLRI CCCCCCEEEEEECCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEE RLDAVLHSGGEAVRVAFQDISQQGAGIECDKWLLMNELVRVETGVLPPIYAKVRWRSHPR EEEEHHHCCCHHEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEECCCCC YGLLFEQTFKLDELARIAAPLQTGDAQVAGRAANSRTA CCCHHHHHCCHHHHHHHHCCCCCCCCHHCCCCCCCCCC >Mature Secondary Structure AHIDDQLPPQDGPDSAEQRTAPRFTLLIRAAKLIVDDEREFLCVIRDASISGLKIRLFN CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHEECCCEEEEEEECCCCCCEEEEEEC PLPDHKSLRIEMSNGDRYAVEQVWADGEYAGLQFLDEVGIERLLDESHGPFPKRQVRLRI CCCCCCEEEEEECCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEE RLDAVLHSGGEAVRVAFQDISQQGAGIECDKWLLMNELVRVETGVLPPIYAKVRWRSHPR EEEEHHHCCCHHEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEECCCCC YGLLFEQTFKLDELARIAAPLQTGDAQVAGRAANSRTA CCCHHHHHCCHHHHHHHHCCCCCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA