Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is erpA [H]

Identifier: 87198181

GI number: 87198181

Start: 154071

End: 154466

Strand: Direct

Name: erpA [H]

Synonym: Saro_0155

Alternate gene names: 87198181

Gene position: 154071-154466 (Clockwise)

Preceding gene: 87198180

Following gene: 87198182

Centisome position: 4.33

GC content: 67.68

Gene sequence:

>396_bases
ATGACGAGCGGACCCGTTGAGGTTGGACGCCTGCGCGCCTATCTTGGCCCCATGAGCGAAACCGCAATCCAGACGCCCGT
CACTCTCGCCCCGAGCGCCGCCGCGCGCGTTGCCGCGATTGCCGCGAAGCAGGGCAAGCCTGCCATTCTTCGACTTTCGG
TCGAGGGCGGCGGCTGCTCCGGCTTCCAGTACCGGTTCGGGCTCGCGGATGCGCCGGAAGAAGGCGATACGATCGCCGAG
ACGGACGGCGTGCGGCTTGTGGTCGACGAGGTCAGCCTCGGCCTGCTCGAGGGCAGCATGGTGGAATATGTCGAGTCGCT
TGGCGGCGCGGCGTTCCGTGTGACCAACCCCCAGGCGGCATCGGGTTGCGGCTGCGGGGCTTCCTTCGCCATTTGA

Upstream 100 bases:

>100_bases
CTCGGCATCGGGTTTGCGATGCTGTTGATGGCCGCACTGATGGGGCTGGTTTTCCTTTCGAGCGGTACCGGACACGACGA
ATCCATCGAGGATCCGCTGG

Downstream 100 bases:

>100_bases
CGCCCGGTCGGGCGTCGTTTCGCAGCGCCCATCCGGCACCAGCAGGAATGCCGAAAAGATGACGCTCAAGGTCGCAAGTT
TCAACATCAACGGGATCAAG

Product: HesB/YadR/YfhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTSGPVEVGRLRAYLGPMSETAIQTPVTLAPSAAARVAAIAAKQGKPAILRLSVEGGGCSGFQYRFGLADAPEEGDTIAE
TDGVRLVVDEVSLGLLEGSMVEYVESLGGAAFRVTNPQAASGCGCGASFAI

Sequences:

>Translated_131_residues
MTSGPVEVGRLRAYLGPMSETAIQTPVTLAPSAAARVAAIAAKQGKPAILRLSVEGGGCSGFQYRFGLADAPEEGDTIAE
TDGVRLVVDEVSLGLLEGSMVEYVESLGGAAFRVTNPQAASGCGCGASFAI
>Mature_130_residues
TSGPVEVGRLRAYLGPMSETAIQTPVTLAPSAAARVAAIAAKQGKPAILRLSVEGGGCSGFQYRFGLADAPEEGDTIAET
DGVRLVVDEVSLGLLEGSMVEYVESLGGAAFRVTNPQAASGCGCGASFAI

Specific function: Required for insertion of 4Fe-4S clusters for at least ispG [H]

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI160420328, Length=137, Percent_Identity=40.1459854014599, Blast_Score=87, Evalue=5e-18,
Organism=Escherichia coli, GI1786351, Length=107, Percent_Identity=48.5981308411215, Blast_Score=101, Evalue=1e-23,
Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=41.9047619047619, Blast_Score=87, Evalue=5e-19,
Organism=Escherichia coli, GI1787974, Length=105, Percent_Identity=34.2857142857143, Blast_Score=74, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71998452, Length=110, Percent_Identity=40, Blast_Score=87, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI193209025, Length=116, Percent_Identity=30.1724137931034, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323001, Length=105, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24649697, Length=109, Percent_Identity=40.3669724770642, Blast_Score=76, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870
- InterPro:   IPR023063 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 13234; Mature: 13103

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSGPVEVGRLRAYLGPMSETAIQTPVTLAPSAAARVAAIAAKQGKPAILRLSVEGGGCS
CCCCCCHHHHHHHHHCCCCCCHHCCCCEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCC
GFQYRFGLADAPEEGDTIAETDGVRLVVDEVSLGLLEGSMVEYVESLGGAAFRVTNPQAA
CEEEEECCCCCCCCCCEEECCCCCEEEEECCCCCHHCCHHHHHHHHCCCCEEEECCCCCC
SGCGCGASFAI
CCCCCCCCCCC
>Mature Secondary Structure 
TSGPVEVGRLRAYLGPMSETAIQTPVTLAPSAAARVAAIAAKQGKPAILRLSVEGGGCS
CCCCCHHHHHHHHHCCCCCCHHCCCCEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCC
GFQYRFGLADAPEEGDTIAETDGVRLVVDEVSLGLLEGSMVEYVESLGGAAFRVTNPQAA
CEEEEECCCCCCCCCCEEECCCCCEEEEECCCCCHHCCHHHHHHHHCCCCEEEECCCCCC
SGCGCGASFAI
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA