| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198180
Identifier: 87198180
GI number: 87198180
Start: 153797
End: 154090
Strand: Direct
Name: 87198180
Synonym: Saro_0154
Alternate gene names: NA
Gene position: 153797-154090 (Clockwise)
Preceding gene: 87198177
Following gene: 87198181
Centisome position: 4.32
GC content: 61.22
Gene sequence:
>294_bases ATGGCACCCCGATCCCCGCTAGACGATCCGCACAACGCCAGCTTTGCCTGGGCGCGATACCGCATGCTGATGAAGTGGAT GGCGGGCTTTACCGGGGCGGTCGTCGTGCTTGTCTCGGTGCTGCTCTATCACTGGGTGGGTTTCGTCTCGATCCACTTCT ACATCGCCACCGCGCTCGGCATCGGGTTTGCGATGCTGTTGATGGCCGCACTGATGGGGCTGGTTTTCCTTTCGAGCGGT ACCGGACACGACGAATCCATCGAGGATCCGCTGGATGACGAGCGGACCCGTTGA
Upstream 100 bases:
>100_bases TCTTGCGCGCCGCTTGTCTCCCGGAAGGATCATGCCACCTTGCCGGCCATTGTCAAAGCTGTTGCCAGCACCATCTGGGT TGTCCAAAGGACCTTTCGCC
Downstream 100 bases:
>100_bases GGTTGGACGCCTGCGCGCCTATCTTGGCCCCATGAGCGAAACCGCAATCCAGACGCCCGTCACTCTCGCCCCGAGCGCCG CCGCGCGCGTTGCCGCGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MAPRSPLDDPHNASFAWARYRMLMKWMAGFTGAVVVLVSVLLYHWVGFVSIHFYIATALGIGFAMLLMAALMGLVFLSSG TGHDESIEDPLDDERTR
Sequences:
>Translated_97_residues MAPRSPLDDPHNASFAWARYRMLMKWMAGFTGAVVVLVSVLLYHWVGFVSIHFYIATALGIGFAMLLMAALMGLVFLSSG TGHDESIEDPLDDERTR >Mature_96_residues APRSPLDDPHNASFAWARYRMLMKWMAGFTGAVVVLVSVLLYHWVGFVSIHFYIATALGIGFAMLLMAALMGLVFLSSGT GHDESIEDPLDDERTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10762; Mature: 10631
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPRSPLDDPHNASFAWARYRMLMKWMAGFTGAVVVLVSVLLYHWVGFVSIHFYIATALG CCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGFAMLLMAALMGLVFLSSGTGHDESIEDPLDDERTR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure APRSPLDDPHNASFAWARYRMLMKWMAGFTGAVVVLVSVLLYHWVGFVSIHFYIATALG CCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGFAMLLMAALMGLVFLSSGTGHDESIEDPLDDERTR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA