Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is yegX [C]

Identifier: 87198170

GI number: 87198170

Start: 146028

End: 146723

Strand: Direct

Name: yegX [C]

Synonym: Saro_0144

Alternate gene names: 87198170

Gene position: 146028-146723 (Clockwise)

Preceding gene: 87198169

Following gene: 87198171

Centisome position: 4.1

GC content: 66.81

Gene sequence:

>696_bases
ATGGCGAAGAAACGGAACACGGTGCGTAGGCGCCTGCTCGCGGCGTTGCTGCTGGTCGTGCTCGTGGGCGCGGGCGCCGG
CTGGTGGACGTCGCGCACCTGGATGCCGGACCGGACGCGCTATCCGGTCCAGGGCGTCTGGCTGAGCGACGATGATGGTA
GCGTCGACTGGCGGTTTCTGCGCGCCGCAGGCGCGGATTTCGCCTACCTGACCGCCAGCGAAGGTGCCGGGACGCGGGAC
AGTGTCTATGCCGCAGGCGTCGAAGCAGCCCGGTTGCGCGGACTGCAGGTAGGGCCGGTCCATGTCTACGACCTGTGTGC
CCCGGCCGACGCGCAGGCCGCGAACTTCGTGACCGTGGTGCCACGCGATCCGGAGTTGCTCCCACCGGCGATTGCGCTCG
ACATCGATTCGCGCACCTGCCCTGAACCTCCCGGCGAGGCGCAGATGCAGAGCGAGTTGACCACGTTCCTCAACCAGGTG
GAGAAGCATGCAGAGAAGCCAGCGATCCTGATGGTGTCGCGCGGTCTGGAAAAGCAGTATCATCTTGCCGCCATGATCGA
CCGCAATCTCTGGGTTTCGCAGGACTTCATCGAGCCCGGCTACGCCGGCAGGCCGTGGGTCATGTGGACAGCGACCAAGC
GCCTGCGTCTGCATGGCGCAAGCGGCCCCCTGCGCTGGGTCGTCGTGCAGCCATGA

Upstream 100 bases:

>100_bases
AAGATCGATACCGATTTCGCTACGGCCCGCCGCCTCTTTACCCTGATCTGCGTGCTGCATATCAGGGGCTGACAACAGGC
GGGACGCGACTCTCTCTATC

Downstream 100 bases:

>100_bases
GTATCGATCTTGTCGCGGAACGCCGGGAAGCGCTGGTCGCCGCTGCACGCACGGCGATGGGCACTGCCTATGCGCCCTAT
TCCGGTTTCCATGTGGGCGC

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Lysozyme; Glycosyl Hydrolase Family; Glycosyl Hydrolase/Lysozyme; Glycosyl Transferase; Glycosy Hydrolase Family Protein; Cell-Wall Lytic; Glycosyl Hydrolases Family; Glycosyl Hydrolase Lysozyme Protein; Glycoside Hydrolase Protein; Family; Glycosyl Hydrolase; Cell-Wall Lytic Muramidase Protein; Extracellular Glycosyl Hydrolase

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MAKKRNTVRRRLLAALLLVVLVGAGAGWWTSRTWMPDRTRYPVQGVWLSDDDGSVDWRFLRAAGADFAYLTASEGAGTRD
SVYAAGVEAARLRGLQVGPVHVYDLCAPADAQAANFVTVVPRDPELLPPAIALDIDSRTCPEPPGEAQMQSELTTFLNQV
EKHAEKPAILMVSRGLEKQYHLAAMIDRNLWVSQDFIEPGYAGRPWVMWTATKRLRLHGASGPLRWVVVQP

Sequences:

>Translated_231_residues
MAKKRNTVRRRLLAALLLVVLVGAGAGWWTSRTWMPDRTRYPVQGVWLSDDDGSVDWRFLRAAGADFAYLTASEGAGTRD
SVYAAGVEAARLRGLQVGPVHVYDLCAPADAQAANFVTVVPRDPELLPPAIALDIDSRTCPEPPGEAQMQSELTTFLNQV
EKHAEKPAILMVSRGLEKQYHLAAMIDRNLWVSQDFIEPGYAGRPWVMWTATKRLRLHGASGPLRWVVVQP
>Mature_230_residues
AKKRNTVRRRLLAALLLVVLVGAGAGWWTSRTWMPDRTRYPVQGVWLSDDDGSVDWRFLRAAGADFAYLTASEGAGTRDS
VYAAGVEAARLRGLQVGPVHVYDLCAPADAQAANFVTVVPRDPELLPPAIALDIDSRTCPEPPGEAQMQSELTTFLNQVE
KHAEKPAILMVSRGLEKQYHLAAMIDRNLWVSQDFIEPGYAGRPWVMWTATKRLRLHGASGPLRWVVVQP

Specific function: Unknown

COG id: COG3757

COG function: function code M; Lyzozyme M1 (1,4-beta-N-acetylmuramidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25559; Mature: 25427

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKRNTVRRRLLAALLLVVLVGAGAGWWTSRTWMPDRTRYPVQGVWLSDDDGSVDWRFL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE
RAAGADFAYLTASEGAGTRDSVYAAGVEAARLRGLQVGPVHVYDLCAPADAQAANFVTVV
ECCCCCEEEEEECCCCCCCCCEECCCCHHHHHCCCEECCEEEEEECCCCCCCCCCEEEEE
PRDPELLPPAIALDIDSRTCPEPPGEAQMQSELTTFLNQVEKHAEKPAILMVSRGLEKQY
CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHH
HLAAMIDRNLWVSQDFIEPGYAGRPWVMWTATKRLRLHGASGPLRWVVVQP
HEEEEECCCCEEEHHCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEECC
>Mature Secondary Structure 
AKKRNTVRRRLLAALLLVVLVGAGAGWWTSRTWMPDRTRYPVQGVWLSDDDGSVDWRFL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE
RAAGADFAYLTASEGAGTRDSVYAAGVEAARLRGLQVGPVHVYDLCAPADAQAANFVTVV
ECCCCCEEEEEECCCCCCCCCEECCCCHHHHHCCCEECCEEEEEECCCCCCCCCCEEEEE
PRDPELLPPAIALDIDSRTCPEPPGEAQMQSELTTFLNQVEKHAEKPAILMVSRGLEKQY
CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHH
HLAAMIDRNLWVSQDFIEPGYAGRPWVMWTATKRLRLHGASGPLRWVVVQP
HEEEEECCCCEEEHHCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA