Click here to switch to the map view.

The map label for this gene is 87198169

Identifier: 87198169

GI number: 87198169

Start: 145505

End: 145999

Strand: Direct

Name: 87198169

Synonym: Saro_0143

Alternate gene names: NA

Gene position: 145505-145999 (Clockwise)

Preceding gene: 87198166

Following gene: 87198170

Centisome position: 4.09

GC content: 60.61

Gene sequence:

>495_bases
ATGGGCGACCCGCGCATCTCGCATATCGAGCTGGACGAAGCGACGATCATCTGGCGCAATGCCGATATCGAGCAGGAGCG
CCGCATCGCGATCTTCGACCTGATCGAGGAAAACACCTTCAAGCCGCTGCGCGCGTTCGAGGCCGGGCACGAGGGGCCCT
ATAGGTTGAAGCTTTCGGTCGAGGACGGGCGTCTGGCGCTGACGGTTTCGGACGATGACGGCAATGGTGGCGGCCAGTTG
CTGGAGACAGTGATTCTGGGGCTGGGGCGTTTCCGCCGTCCGATCCGAGAGTATTTCGCGATCTGCGACAGCTACTACCA
GGCCATTCGCAAGGCGACTGCCACCGAAATCGAGACAATCGACATGGCGCGCCGCGGTGTTCACAACGAAGCGGCTGAAA
TGCTTCTGGAACGTCTGCAAGGCAAGATCGATACCGATTTCGCTACGGCCCGCCGCCTCTTTACCCTGATCTGCGTGCTG
CATATCAGGGGCTGA

Upstream 100 bases:

>100_bases
GTGTGGAAAGCGGGGATGGTTGTGTCCGCCTCGCGCTTGTCGCAGCACCTGGCGCTCCCCTCTTGCCTGCCCTGCGCGCG
TCTGCAACACAGGTTGCTCA

Downstream 100 bases:

>100_bases
CAACAGGCGGGACGCGACTCTCTCTATCATGGCGAAGAAACGGAACACGGTGCGTAGGCGCCTGCTCGCGGCGTTGCTGC
TGGTCGTGCTCGTGGGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MGDPRISHIELDEATIIWRNADIEQERRIAIFDLIEENTFKPLRAFEAGHEGPYRLKLSVEDGRLALTVSDDDGNGGGQL
LETVILGLGRFRRPIREYFAICDSYYQAIRKATATEIETIDMARRGVHNEAAEMLLERLQGKIDTDFATARRLFTLICVL
HIRG

Sequences:

>Translated_164_residues
MGDPRISHIELDEATIIWRNADIEQERRIAIFDLIEENTFKPLRAFEAGHEGPYRLKLSVEDGRLALTVSDDDGNGGGQL
LETVILGLGRFRRPIREYFAICDSYYQAIRKATATEIETIDMARRGVHNEAAEMLLERLQGKIDTDFATARRLFTLICVL
HIRG
>Mature_163_residues
GDPRISHIELDEATIIWRNADIEQERRIAIFDLIEENTFKPLRAFEAGHEGPYRLKLSVEDGRLALTVSDDDGNGGGQLL
ETVILGLGRFRRPIREYFAICDSYYQAIRKATATEIETIDMARRGVHNEAAEMLLERLQGKIDTDFATARRLFTLICVLH
IRG

Specific function: Unknown

COG id: COG5328

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0262 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y143_NOVAD (Q2GC31)

Other databases:

- EMBL:   CP000248
- RefSeq:   YP_495426.1
- STRING:   Q2GC31
- GeneID:   3918117
- GenomeReviews:   CP000248_GR
- KEGG:   nar:Saro_0143
- NMPDR:   fig|48935.1.peg.3617
- eggNOG:   COG5328
- HOGENOM:   HBG294171
- OMA:   IDMARRG
- ProtClustDB:   PRK02853
- BioCyc:   NARO279238:SARO_0143-MONOMER
- HAMAP:   MF_00678
- InterPro:   IPR008321
- PIRSF:   PIRSF032146

Pfam domain/function: PF06793 UPF0262

EC number: NA

Molecular weight: Translated: 18675; Mature: 18543

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDPRISHIELDEATIIWRNADIEQERRIAIFDLIEENTFKPLRAFEAGHEGPYRLKLSV
CCCCCCCEEEECCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEE
EDGRLALTVSDDDGNGGGQLLETVILGLGRFRRPIREYFAICDSYYQAIRKATATEIETI
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DMARRGVHNEAAEMLLERLQGKIDTDFATARRLFTLICVLHIRG
HHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GDPRISHIELDEATIIWRNADIEQERRIAIFDLIEENTFKPLRAFEAGHEGPYRLKLSV
CCCCCCEEEECCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEE
EDGRLALTVSDDDGNGGGQLLETVILGLGRFRRPIREYFAICDSYYQAIRKATATEIETI
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DMARRGVHNEAAEMLLERLQGKIDTDFATARRLFTLICVLHIRG
HHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA