Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198157

Identifier: 87198157

GI number: 87198157

Start: 133981

End: 134679

Strand: Direct

Name: 87198157

Synonym: Saro_0131

Alternate gene names: NA

Gene position: 133981-134679 (Clockwise)

Preceding gene: 87198156

Following gene: 87198165

Centisome position: 3.76

GC content: 65.52

Gene sequence:

>699_bases
ATGCTTCGCCACCTATCGCTCGCAGCTCTCGTGTTCTGCGCCATGACCGCGCCCGCTGTGGCGAGGGATGATGACCGTTC
GTCCGCTGGAGGACACGGTGGCTGGAGTGGCGGTTGGCAGGGCGGCTATGTGCCAGGCCCGGTCTATTACCCGCCGATGT
TTGGCCCGCCCTATCCCACAGTCGTGATGGCGCATCCGGTTGATGGACCGCCGCCGCCGGTTGCCTATCCGCAAGGTTAC
GCCTCGCCTGATCCCCGTTGGGGGGAGATGATCGAGCGCTGCCGAAAGGTCCAGGGTGACAGCGGCGTGGGCGGAGCCCT
GCTTGGCGGTGTCGCTGGCGGGGTGGTCGGTAACCGTGTCGTGGACGGTAACCGTACGCTCGGGACTGTGGCAGGCGCGG
CGGTAGGTGCGATTGCCGGCGCTGCCATCGACAAGGCCGAGGACAGCGATCTGCGGCGCGAGTGCGACGACTATTTCAGG
TCGATGCCCCGACAGGCCTATGGCTATCCAGGTGGCGGCTATGCGCCGTATGGCTACATGATGGTGCCGGTCATGCTGCC
GCCGCAGAAGCCCTGTGTGGAGACCACGGTGGTGACCGAGAAGTGGGTCGATGAACCCGTCCGCAGTCGCTACATCCCTC
GCCGTGCCCCGGCGGTGAAGGAAAAGCGGGTAAAGGAAAAGCGCGTCTATACCGGCTGA

Upstream 100 bases:

>100_bases
GACGACACCGCCTTACGAACCTTGGTTTCCTGCGGCCCTTGATGGTAAGTTCGTGGTTAACGACCGGTTACGTACCTGTG
CCGGACCGGGGGACCAAACG

Downstream 100 bases:

>100_bases
GACAGCACTGTTCCACGTGGAACGGCAGGTCGTAGCGAAGACAGTCCTGGAATTGAAAAGGGGCAGCCCGTGCGAGCTGC
CCCTTCCCTTTTCAGCCAGG

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MLRHLSLAALVFCAMTAPAVARDDDRSSAGGHGGWSGGWQGGYVPGPVYYPPMFGPPYPTVVMAHPVDGPPPPVAYPQGY
ASPDPRWGEMIERCRKVQGDSGVGGALLGGVAGGVVGNRVVDGNRTLGTVAGAAVGAIAGAAIDKAEDSDLRRECDDYFR
SMPRQAYGYPGGGYAPYGYMMVPVMLPPQKPCVETTVVTEKWVDEPVRSRYIPRRAPAVKEKRVKEKRVYTG

Sequences:

>Translated_232_residues
MLRHLSLAALVFCAMTAPAVARDDDRSSAGGHGGWSGGWQGGYVPGPVYYPPMFGPPYPTVVMAHPVDGPPPPVAYPQGY
ASPDPRWGEMIERCRKVQGDSGVGGALLGGVAGGVVGNRVVDGNRTLGTVAGAAVGAIAGAAIDKAEDSDLRRECDDYFR
SMPRQAYGYPGGGYAPYGYMMVPVMLPPQKPCVETTVVTEKWVDEPVRSRYIPRRAPAVKEKRVKEKRVYTG
>Mature_232_residues
MLRHLSLAALVFCAMTAPAVARDDDRSSAGGHGGWSGGWQGGYVPGPVYYPPMFGPPYPTVVMAHPVDGPPPPVAYPQGY
ASPDPRWGEMIERCRKVQGDSGVGGALLGGVAGGVVGNRVVDGNRTLGTVAGAAVGAIAGAAIDKAEDSDLRRECDDYFR
SMPRQAYGYPGGGYAPYGYMMVPVMLPPQKPCVETTVVTEKWVDEPVRSRYIPRRAPAVKEKRVKEKRVYTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24711; Mature: 24711

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRHLSLAALVFCAMTAPAVARDDDRSSAGGHGGWSGGWQGGYVPGPVYYPPMFGPPYPT
CCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VVMAHPVDGPPPPVAYPQGYASPDPRWGEMIERCRKVQGDSGVGGALLGGVAGGVVGNRV
EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEE
VDGNRTLGTVAGAAVGAIAGAAIDKAEDSDLRRECDDYFRSMPRQAYGYPGGGYAPYGYM
ECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEE
MVPVMLPPQKPCVETTVVTEKWVDEPVRSRYIPRRAPAVKEKRVKEKRVYTG
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRHLSLAALVFCAMTAPAVARDDDRSSAGGHGGWSGGWQGGYVPGPVYYPPMFGPPYPT
CCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VVMAHPVDGPPPPVAYPQGYASPDPRWGEMIERCRKVQGDSGVGGALLGGVAGGVVGNRV
EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEE
VDGNRTLGTVAGAAVGAIAGAAIDKAEDSDLRRECDDYFRSMPRQAYGYPGGGYAPYGYM
ECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEE
MVPVMLPPQKPCVETTVVTEKWVDEPVRSRYIPRRAPAVKEKRVKEKRVYTG
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA