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The map label for this gene is ynfJ [C]

Identifier: 87198133

GI number: 87198133

Start: 111131

End: 112870

Strand: Direct

Name: ynfJ [C]

Synonym: Saro_0107

Alternate gene names: 87198133

Gene position: 111131-112870 (Clockwise)

Preceding gene: 87198132

Following gene: 87198144

Centisome position: 3.12

GC content: 67.01

Gene sequence:

>1740_bases
GTGCTGAAGCGACTCCCCGCCCTGTTGCGCTGGCTGCGCAAGCAAGTCCGTGCAAGCGAACTGGTGTTCCTCGCGCTCGC
CATCGGAGTGGGCATGGCGGGTGGCCTGTTCACGGTAATCCTGGGCGCCGCCGCGCGCACCGTGCAACACGTCCTATACG
ACCTGCCTCCGGACCTCCGCCTTAGCGCAGCTCCTTCGCTGCCACTATCCGTTCTCATCGTCCTGCCGCTTGGCGGCCTC
GTGCTCGCCGCGTTCAACTGGGCTGCGGGCGTCCGCCGGCGCGCGCTGGTCGACGCGGTCGAGGCCAACGCTCTGCACGG
GGGCCGCATGTCGGCCATGGACAGCGCCGTGGTGGCTGGCCAGACCGTCATTTCCAACGGGTTCGGCGCGTCGGTCGGGC
TTGAGGCGGCGTACGCACAAGTCGGCGGTCTCTTCGGCTCGCTCGGTGCGCGCCTCCTCAGCCTGCGCCGACCAGACGCG
CGAATCCTGGTGGGGGCGGGCGCCGGAAGCGCGATTGCAGCCGCATTCGGTGCGCCGCTTGCCGGGGCATTCTACGCCTT
CGAGATCGTGATCGGGGCCTACACGCCGTCCGCCATCGCACCTGTAGTCGCCGCAGCGCTTGCCGGGGCTCAGGTCGCGC
GTCGGCTTGGCGTCGTACCCTATGTGGTCAGTGCCGAGCCAGGGCCGGCCATCCACACGGCAGGCTACATTGCCTACGGC
GGGCTGGGGGCAGTGTGTGCGCTGCTTGGCATCGTGCTGATGCGGGCGGTGGCGCTAGTGGAAACAGGGTCGCGCAAGGC
GATACCGGGGCCCTGGCGGCCTGCAATCGGCGGCCTGCTGCTGATCCCACTGGCCATGCTGACACCGCAGGCACTCTCGG
CCGGACACAGCGCCCTCCATCTCGACATGACCGAGACGCTATCACTCGCCTTCGTGGCCATGATCCTCCTGGTGAAGAGC
GCAAGTTCGATCGTTTCGCTCGGCTTCGGTTTTCGCGGCGGCCTGTTCTTCGCCTCGCTGTTTCTCGGCACGCTGGTTGG
ACACCTTTACGCCGGTTTGCTGGCCCTGGGGCTGGGCCACCCGGTGCTCAACATCGGCAACGCATCACTGGTGGGAATGG
CAGCCCTTGCAGTGGCGGTCGTCGGCGCGCCCTTCACGATGGCCATGCTCGTGCTCGAGGCGACGGGCAACTTCAGCCTG
ACCGGAGCCGTACTTGCGGCATCGCTCGTGTCCTCCACGCTGGTGCGCGAGCTGTTCGGCTATTCCTTCTCCACATGGCG
CCTGCACCTGCGCGGTGAAACGATCACCAGCGCGCGCGACGTGGGCTGGGTAAGGACGCTAACCGCAGGACGGATGATGC
GGCGGGGGATGGCGACGATAGACGGCAGCGCGACCATCGCGGAACTGCGCCGCCGCTTTCCGCTTGGCTCCACAAGCCGC
GTAGTGGTGACCGACACGTCCGGGAAATACGCGGGGATCGTGACTATCGCCGCTGCCTTTGCGGACGGCGTCAATTCCGA
AGCGGCGGTCACTTCGGTGTGCCACAGCGCGCAGGCCACGCTTTCCCCGGAGCAAGACATCGTCCAGATCATGGGGCGCT
TCGACGATCTGGCGACGGACGAACTGGCCGTGGTCGACATGCAGGGCAACGTCCTTGGCCTGGTCACCGAAGCCCACGTG
CGCAGGCGCTATGCCGAAGAACTGGACAAGGCGCAGCGAGATCTGTTCGGAGAACGTTGA

Upstream 100 bases:

>100_bases
ACTGACCTGAATCCCGCCCGGGCGCGCATCAGCGAGGCCCGGGCGGAAGCGGCCCAATATCGTCCTTCGTGCAAATGCCT
GATTGCGCTAGGCAACAGGC

Downstream 100 bases:

>100_bases
GGCTACAGAGCTACGCGAAAGGGCCGGCGCAACCTGTCGGTCGCGCCAGCCCTGCATTTCCCGTCCAACGGAAATCAGCG
ATAGAAGATGTGGCTATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MLKRLPALLRWLRKQVRASELVFLALAIGVGMAGGLFTVILGAAARTVQHVLYDLPPDLRLSAAPSLPLSVLIVLPLGGL
VLAAFNWAAGVRRRALVDAVEANALHGGRMSAMDSAVVAGQTVISNGFGASVGLEAAYAQVGGLFGSLGARLLSLRRPDA
RILVGAGAGSAIAAAFGAPLAGAFYAFEIVIGAYTPSAIAPVVAAALAGAQVARRLGVVPYVVSAEPGPAIHTAGYIAYG
GLGAVCALLGIVLMRAVALVETGSRKAIPGPWRPAIGGLLLIPLAMLTPQALSAGHSALHLDMTETLSLAFVAMILLVKS
ASSIVSLGFGFRGGLFFASLFLGTLVGHLYAGLLALGLGHPVLNIGNASLVGMAALAVAVVGAPFTMAMLVLEATGNFSL
TGAVLAASLVSSTLVRELFGYSFSTWRLHLRGETITSARDVGWVRTLTAGRMMRRGMATIDGSATIAELRRRFPLGSTSR
VVVTDTSGKYAGIVTIAAAFADGVNSEAAVTSVCHSAQATLSPEQDIVQIMGRFDDLATDELAVVDMQGNVLGLVTEAHV
RRRYAEELDKAQRDLFGER

Sequences:

>Translated_579_residues
MLKRLPALLRWLRKQVRASELVFLALAIGVGMAGGLFTVILGAAARTVQHVLYDLPPDLRLSAAPSLPLSVLIVLPLGGL
VLAAFNWAAGVRRRALVDAVEANALHGGRMSAMDSAVVAGQTVISNGFGASVGLEAAYAQVGGLFGSLGARLLSLRRPDA
RILVGAGAGSAIAAAFGAPLAGAFYAFEIVIGAYTPSAIAPVVAAALAGAQVARRLGVVPYVVSAEPGPAIHTAGYIAYG
GLGAVCALLGIVLMRAVALVETGSRKAIPGPWRPAIGGLLLIPLAMLTPQALSAGHSALHLDMTETLSLAFVAMILLVKS
ASSIVSLGFGFRGGLFFASLFLGTLVGHLYAGLLALGLGHPVLNIGNASLVGMAALAVAVVGAPFTMAMLVLEATGNFSL
TGAVLAASLVSSTLVRELFGYSFSTWRLHLRGETITSARDVGWVRTLTAGRMMRRGMATIDGSATIAELRRRFPLGSTSR
VVVTDTSGKYAGIVTIAAAFADGVNSEAAVTSVCHSAQATLSPEQDIVQIMGRFDDLATDELAVVDMQGNVLGLVTEAHV
RRRYAEELDKAQRDLFGER
>Mature_579_residues
MLKRLPALLRWLRKQVRASELVFLALAIGVGMAGGLFTVILGAAARTVQHVLYDLPPDLRLSAAPSLPLSVLIVLPLGGL
VLAAFNWAAGVRRRALVDAVEANALHGGRMSAMDSAVVAGQTVISNGFGASVGLEAAYAQVGGLFGSLGARLLSLRRPDA
RILVGAGAGSAIAAAFGAPLAGAFYAFEIVIGAYTPSAIAPVVAAALAGAQVARRLGVVPYVVSAEPGPAIHTAGYIAYG
GLGAVCALLGIVLMRAVALVETGSRKAIPGPWRPAIGGLLLIPLAMLTPQALSAGHSALHLDMTETLSLAFVAMILLVKS
ASSIVSLGFGFRGGLFFASLFLGTLVGHLYAGLLALGLGHPVLNIGNASLVGMAALAVAVVGAPFTMAMLVLEATGNFSL
TGAVLAASLVSSTLVRELFGYSFSTWRLHLRGETITSARDVGWVRTLTAGRMMRRGMATIDGSATIAELRRRFPLGSTSR
VVVTDTSGKYAGIVTIAAAFADGVNSEAAVTSVCHSAQATLSPEQDIVQIMGRFDDLATDELAVVDMQGNVLGLVTEAHV
RRRYAEELDKAQRDLFGER

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081943, Length=312, Percent_Identity=29.4871794871795, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 59734; Mature: 59734

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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CEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]