| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is nadA [H]
Identifier: 87198115
GI number: 87198115
Start: 92038
End: 93036
Strand: Direct
Name: nadA [H]
Synonym: Saro_0089
Alternate gene names: 87198115
Gene position: 92038-93036 (Clockwise)
Preceding gene: 87198114
Following gene: 87198117
Centisome position: 2.58
GC content: 64.06
Gene sequence:
>999_bases ATGACCGTCCAGCCTGCGAACCTTTCCGGACTCGACCTGCGCGCCGAGATCGACCGCCTGCGCAAGGAGCGCAAGGCCGT TATCCTGGCCCACTACTACCAGCGGCCGGAGATCCAGGATCTTGCCGATTTCGTCGGCGACAGCCTCGAACTGTCGCGCA AGGCGGCAGCAACCGACGCGGAAGTCATCGCCTTCTGCGGCGTGAAGTTCATGGCCGATACGGCCAAGATCCTCAGCCCA GAGAAGATCGTCGTCCTGCCTGATCTCGACGCCGGATGCAGCCTCGAGGACTCCTGCCCGCCGGACAAGTTCAAGGCCTT CCGCGAGGCGCATCCCGATCACATCGCGCTGACCTACATCAACTGCTCGACCGAGGTTAAGGCGCTCTCGGACGTCATCG TCACCTCATCCAGCGCGGAAACGATCCTGTCGCAGATCCCGCCGGAGCAGAAGATCATCTTCGGCCCGGACCGGCACCTC GGCGGCTACCTCAACCGCAAGTTCGGGCGCGACATGCTGCTCTGGCCGGGCGTGTGCATCGTGCACGAGGCTTTCTCGGA GACCGAGCTGCTGAAGCTCAAGGCGCAGCACCCTGACGCGCCCGTCGCCGCGCATCCCGAATGCCCGCCCCACATCGTCG ACCACGCGGACTACGTCGGGTCGACCAGCGGCATCCTGCAATATGCCAAGACGATGACCGGCGACACGCTGATCGTTGCA ACCGAGCCGCACATCATCCACCAGATGGAGCTGGCGATGCCCGACAAGACCTTCATCGGCGCGCCGGGGGCGGACGGCAA CTGCAACTGCAACATCTGCCCGTACATGGCGCTCAACACGATGGAAAAGCTCTACCTCGCGCTGCGCGACCTGAGCCCGC GCATTGAAATCGAGGAAGACATGCGCCTCGCCGCCAAAAAGAGCCTCGATCGCATGCTCGATATGGCGAGCGGCACGGTC GGCCTGGGCGACCTGGGAGCACGTCCCTTCGGTAGCTGA
Upstream 100 bases:
>100_bases CCGTTCGTTTCGCTGGCGGAAGGTATTGCGGCGGGCTGATCCGGTCCCTAAGTCCCCTCTCGCCCCGGCACGGTCGCCGG GCGAGAGGAACTGCCCAGCG
Downstream 100 bases:
>100_bases TCATCAGCCGGCAACCATACCCCGCCCCGCCATCGCCGGTGCCGCGTCGATCACCTCGAGACAGGCGCGAACGGCGGGGT CGGGCATGGGATTCGCACAT
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTVQPANLSGLDLRAEIDRLRKERKAVILAHYYQRPEIQDLADFVGDSLELSRKAAATDAEVIAFCGVKFMADTAKILSP EKIVVLPDLDAGCSLEDSCPPDKFKAFREAHPDHIALTYINCSTEVKALSDVIVTSSSAETILSQIPPEQKIIFGPDRHL GGYLNRKFGRDMLLWPGVCIVHEAFSETELLKLKAQHPDAPVAAHPECPPHIVDHADYVGSTSGILQYAKTMTGDTLIVA TEPHIIHQMELAMPDKTFIGAPGADGNCNCNICPYMALNTMEKLYLALRDLSPRIEIEEDMRLAAKKSLDRMLDMASGTV GLGDLGARPFGS
Sequences:
>Translated_332_residues MTVQPANLSGLDLRAEIDRLRKERKAVILAHYYQRPEIQDLADFVGDSLELSRKAAATDAEVIAFCGVKFMADTAKILSP EKIVVLPDLDAGCSLEDSCPPDKFKAFREAHPDHIALTYINCSTEVKALSDVIVTSSSAETILSQIPPEQKIIFGPDRHL GGYLNRKFGRDMLLWPGVCIVHEAFSETELLKLKAQHPDAPVAAHPECPPHIVDHADYVGSTSGILQYAKTMTGDTLIVA TEPHIIHQMELAMPDKTFIGAPGADGNCNCNICPYMALNTMEKLYLALRDLSPRIEIEEDMRLAAKKSLDRMLDMASGTV GLGDLGARPFGS >Mature_331_residues TVQPANLSGLDLRAEIDRLRKERKAVILAHYYQRPEIQDLADFVGDSLELSRKAAATDAEVIAFCGVKFMADTAKILSPE KIVVLPDLDAGCSLEDSCPPDKFKAFREAHPDHIALTYINCSTEVKALSDVIVTSSSAETILSQIPPEQKIIFGPDRHLG GYLNRKFGRDMLLWPGVCIVHEAFSETELLKLKAQHPDAPVAAHPECPPHIVDHADYVGSTSGILQYAKTMTGDTLIVAT EPHIIHQMELAMPDKTFIGAPGADGNCNCNICPYMALNTMEKLYLALRDLSPRIEIEEDMRLAAKKSLDRMLDMASGTVG LGDLGARPFGS
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=318, Percent_Identity=44.6540880503145, Blast_Score=259, Evalue=2e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 - InterPro: IPR023066 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 36325; Mature: 36194
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQPANLSGLDLRAEIDRLRKERKAVILAHYYQRPEIQDLADFVGDSLELSRKAAATDA CCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEHHCCCCHHHHHHHCCCHHHHHHHHHCCCH EVIAFCGVKFMADTAKILSPEKIVVLPDLDAGCSLEDSCPPDKFKAFREAHPDHIALTYI HHHHHHCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEE NCSTEVKALSDVIVTSSSAETILSQIPPEQKIIFGPDRHLGGYLNRKFGRDMLLWPGVCI ECCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCHHHCHHHHHHHCCCEEECCCHHH VHEAFSETELLKLKAQHPDAPVAAHPECPPHIVDHADYVGSTSGILQYAKTMTGDTLIVA HHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHCCHHHCCCHHHHHHHHHHCCCCEEEEE TEPHIIHQMELAMPDKTFIGAPGADGNCNCNICPYMALNTMEKLYLALRDLSPRIEIEED ECCHHEEHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHH MRLAAKKSLDRMLDMASGTVGLGDLGARPFGS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TVQPANLSGLDLRAEIDRLRKERKAVILAHYYQRPEIQDLADFVGDSLELSRKAAATDA CCCCCCCCCCCHHHHHHHHHHHHHEEEEEEHHCCCCHHHHHHHCCCHHHHHHHHHCCCH EVIAFCGVKFMADTAKILSPEKIVVLPDLDAGCSLEDSCPPDKFKAFREAHPDHIALTYI HHHHHHCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEE NCSTEVKALSDVIVTSSSAETILSQIPPEQKIIFGPDRHLGGYLNRKFGRDMLLWPGVCI ECCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCHHHCHHHHHHHCCCEEECCCHHH VHEAFSETELLKLKAQHPDAPVAAHPECPPHIVDHADYVGSTSGILQYAKTMTGDTLIVA HHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHCCHHHCCCHHHHHHHHHHCCCCEEEEE TEPHIIHQMELAMPDKTFIGAPGADGNCNCNICPYMALNTMEKLYLALRDLSPRIEIEED ECCHHEEHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHH MRLAAKKSLDRMLDMASGTVGLGDLGARPFGS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA