| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198051
Identifier: 87198051
GI number: 87198051
Start: 28418
End: 29299
Strand: Direct
Name: 87198051
Synonym: Saro_0025
Alternate gene names: NA
Gene position: 28418-29299 (Clockwise)
Preceding gene: 87198048
Following gene: 87198052
Centisome position: 0.8
GC content: 70.63
Gene sequence:
>882_bases ATGACAAAGCTCAACGCCATATCGCCCCGCAACACCATGGCGATTTCAGCCATGCTGATGCTTTCTCCCGGTCTCGCCCA TGCACAGGACGCGACGGCGCCAATGACTGATGCCCCCGTGCTCTCGGCTCCGGCCACAACTACTACGGCACCAACTACCA CGGCACCGACGATCGTCATTCCCACGCCGGCCCAGGAACCAACCATCGCGCCGGAAGCCGGCACCACGGCTGCTACAACG CCCGCCACTGCCGAACCGCCAGTCCGTGCCGCCCCGCAGCCCCGGATTCGCGCGTCCACACGCCCGTCTCCATCGGCAAG CACCGCGACGACCGCTTCGGCGGTCCCACTTGTGGCACCGGTTGCGGCAGTCGCGCCGCCTGCCCCCGCGCCCGCAGCCG ACGCGCCTCCTGTGGCGACCGTGGACGATTTGGCGGTCGCGAATAGTGATGCAACGCCGGAATGGGCCCTTCCCGTAGGC GCTGCGGCAACGCTCCTTGTTCTGGGCGGCATCGGCCTGGCCATGACCCGCCGCCGCCGCGCCTACGAGGCGGACGTCGA TTTCGTCCCGCCCGCGACAAGCCGCCCGCCCGCCCGGCCGCTTGCCGAAACGCGCGCCGCCCTTCCGGCACCACGCATGG TGCCGACCGCGCCCGCCCATGCCATGACGCCCATCGCGCCGATGGCGAGCACGAGCGAGCGCGAGGCCCTTGTCGAGCGT ATCGTCGCTTCGCCGCCCGACGCCGCCAATCCCTTTACCTCGCGCAAGGCGCGGCGCCGCCGCGCGCGCATCATGGTCCA GTCCATGACCGTACGCAGCGACGCCCCGGCGCGGAGCGCAGAACGCCCGGTCATCCGGCAGCCGGAATACGCGCGGGTCT GA
Upstream 100 bases:
>100_bases ACGACCCGGGAAGTCACAGATCAAATCGCTTCACCGCCAATCCGCGTTCGGCTCATCGCCAACGGGGAACCTTGTCAGCG GTTCGTCGCGTTTTAGCTTC
Downstream 100 bases:
>100_bases AACGGCCGGCCGCGAAGTACCCCACCTTCACCCGTCGCCACGTCGTGGTGAGGGGGAGCGACCCCGTCCATCCCTCCCGG ACGGGGTCGCTCTTTTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTKLNAISPRNTMAISAMLMLSPGLAHAQDATAPMTDAPVLSAPATTTTAPTTTAPTIVIPTPAQEPTIAPEAGTTAATT PATAEPPVRAAPQPRIRASTRPSPSASTATTASAVPLVAPVAAVAPPAPAPAADAPPVATVDDLAVANSDATPEWALPVG AAATLLVLGGIGLAMTRRRRAYEADVDFVPPATSRPPARPLAETRAALPAPRMVPTAPAHAMTPIAPMASTSEREALVER IVASPPDAANPFTSRKARRRRARIMVQSMTVRSDAPARSAERPVIRQPEYARV
Sequences:
>Translated_293_residues MTKLNAISPRNTMAISAMLMLSPGLAHAQDATAPMTDAPVLSAPATTTTAPTTTAPTIVIPTPAQEPTIAPEAGTTAATT PATAEPPVRAAPQPRIRASTRPSPSASTATTASAVPLVAPVAAVAPPAPAPAADAPPVATVDDLAVANSDATPEWALPVG AAATLLVLGGIGLAMTRRRRAYEADVDFVPPATSRPPARPLAETRAALPAPRMVPTAPAHAMTPIAPMASTSEREALVER IVASPPDAANPFTSRKARRRRARIMVQSMTVRSDAPARSAERPVIRQPEYARV >Mature_292_residues TKLNAISPRNTMAISAMLMLSPGLAHAQDATAPMTDAPVLSAPATTTTAPTTTAPTIVIPTPAQEPTIAPEAGTTAATTP ATAEPPVRAAPQPRIRASTRPSPSASTATTASAVPLVAPVAAVAPPAPAPAADAPPVATVDDLAVANSDATPEWALPVGA AATLLVLGGIGLAMTRRRRAYEADVDFVPPATSRPPARPLAETRAALPAPRMVPTAPAHAMTPIAPMASTSEREALVERI VASPPDAANPFTSRKARRRRARIMVQSMTVRSDAPARSAERPVIRQPEYARV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30032; Mature: 29900
Theoretical pI: Translated: 11.51; Mature: 11.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLNAISPRNTMAISAMLMLSPGLAHAQDATAPMTDAPVLSAPATTTTAPTTTAPTIVI CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE PTPAQEPTIAPEAGTTAATTPATAEPPVRAAPQPRIRASTRPSPSASTATTASAVPLVAP ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH VAAVAPPAPAPAADAPPVATVDDLAVANSDATPEWALPVGAAATLLVLGGIGLAMTRRRR HHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AYEADVDFVPPATSRPPARPLAETRAALPAPRMVPTAPAHAMTPIAPMASTSEREALVER HHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHH IVASPPDAANPFTSRKARRRRARIMVQSMTVRSDAPARSAERPVIRQPEYARV HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TKLNAISPRNTMAISAMLMLSPGLAHAQDATAPMTDAPVLSAPATTTTAPTTTAPTIVI CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE PTPAQEPTIAPEAGTTAATTPATAEPPVRAAPQPRIRASTRPSPSASTATTASAVPLVAP ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH VAAVAPPAPAPAADAPPVATVDDLAVANSDATPEWALPVGAAATLLVLGGIGLAMTRRRR HHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AYEADVDFVPPATSRPPARPLAETRAALPAPRMVPTAPAHAMTPIAPMASTSEREALVER HHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHH IVASPPDAANPFTSRKARRRRARIMVQSMTVRSDAPARSAERPVIRQPEYARV HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA