| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198048
Identifier: 87198048
GI number: 87198048
Start: 17734
End: 19323
Strand: Direct
Name: 87198048
Synonym: Saro_0022
Alternate gene names: NA
Gene position: 17734-19323 (Clockwise)
Preceding gene: 87198047
Following gene: 87198051
Centisome position: 0.5
GC content: 61.45
Gene sequence:
>1590_bases GTGCGTCGAATTTTATTAAGAACAGCCAGCGCCTTGGCGGCGCTTTGCCTCGCCATGCCAGTTCAGGCAAAATGGTACGA GGCATCAAGCAAGCACTTCGTGGTCTATTCCGACCGCGGGACTGAACAAGTCCGGATAATGGCCTCCAAGCTCGAGCGCT TTGACGCAGCGCTGCGTCAGCTTACCGGTCGGACTGACGAACCTATCGCCCCGTCGAACCGGGTCACCATTTTCATGGTG CAGTCGCCGATCGATGTCGCCCGCCTGTTCGGAAAGGGCGGAAACTACGTCGGTGGCTTTTACTCCTCGATCGCAGGCGC GTCATACGCGATCGTCCCGCCATTCATTGTGCAGGAGACCGGTGAGAACGGTTTCGCCGAGGGCGTATTGTTGCACGAGT ACGCGCACCATTTCGTTTCGGAAAACCAGTCGATCCTCTACCCGATATGGCTGAACGAGGGATTCGCCGAGTTCGTCTCA ACCGCACGCTTCGAGAAGAACGGTTCGATCGGCCTCGGGCTGCCAGGGCAGTGGCGCGGCTGGCAATTGACGCACCAGGT CTCCGTGCCCGCCGAAATGCTGGTCGACAGCCAGGCCTATTTCGCGCGGCGCGAGTTGGCGTTCGACCAGTTCTACCCCC GCGCGTGGCTGCTTTATCACATGCTGACGTTCGAGGCCTCGCGGGAAGGGCAACTCGCCGCATATGCAGGTGCGCTCAGC CGCGGGCTGAACGACCGGGATGCCGCCATCGCGGCATTCGGCGATTTGCGTCAGCTCGAACTAGATCTTCAATCGTACGG CCGGAAGGTCACGATGCCCTACTACCTCATAAAGGGGGAAACCTTGCGCCCCGCTCAGGTGAACGTACGGGAGCTGAGCA AGGAAGATGCCGAAGCGATGCCCTTCTGGATGCGCATTCGCCGAGGCTTGGAAGAAGGGAACGCCGAACCGCTGGCGGTT GAAGTTCGGGCAATGGCCGCGCGCAACCCCACGAGTGCCTTCGTGCAGACCATCCTCGGGATGGCGGAGTTCGAAGCCGA TCATGTCGATGCTGCACTGGCCGCTGCCGACACGGCAATCGCAATCGACCCGATGGCGATCGAGGCTCACGTCCTCAAAG GGCGCGCGATGCTGGCCAAAGCGTCCCGGAACGGCGCGACGCCCGTCGAATGGAACGCTGTGCGCGCGGCATTTCTCAAG GCGAACGCGATCGACCCTGATCACCCGCAACCTCTGTTCCTGTACTACGCATCGTTCTTGAGTCAGGGGTTCAAGCCCAC CGGTAACGCCTTGCAGGCTCTCTCCCGCGCGCTGGAGCTCGCGCCATACGACCGTGTAATCCGCGCGGAACTGGCGGAGA GTCAAGTTTCTCGCGCCCAATTCGAGGAGGCGAAGTCGACGATACGCATGCTCATGCGTGATCCGCATTCTCCACTGGGC GGCGCCCGCATCCGCGCGGTCATGGAAAAGCTCGACGAGCGCAACGCCGAAGGTGCTCGCAAACTTCTCGAGATGAGCAA CGAGGAGTTCAAGGCAAAGCAGGAGAAGGGTGACCCAGACAGTGGCGCCGGTCGCGAGGCGGCTGCCTGA
Upstream 100 bases:
>100_bases CCGAGGGCGCACCCTCTCCTGCAGTAACGGCCGCGCGAGTGCGTTTGCCGTTTTGAAGCAAACGGTTATGTTGCGCATTT GGGCAGTAACCGGGGGTCTC
Downstream 100 bases:
>100_bases CGCCCACGGCGGCCACCGCACTACTTCTCCCTCGCAAAAGAAAAAGGCCCTGCAGGAGCGATCCTGCAGGGCCTTTTCGT TTCAGCGTGCGAAGCGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MRRILLRTASALAALCLAMPVQAKWYEASSKHFVVYSDRGTEQVRIMASKLERFDAALRQLTGRTDEPIAPSNRVTIFMV QSPIDVARLFGKGGNYVGGFYSSIAGASYAIVPPFIVQETGENGFAEGVLLHEYAHHFVSENQSILYPIWLNEGFAEFVS TARFEKNGSIGLGLPGQWRGWQLTHQVSVPAEMLVDSQAYFARRELAFDQFYPRAWLLYHMLTFEASREGQLAAYAGALS RGLNDRDAAIAAFGDLRQLELDLQSYGRKVTMPYYLIKGETLRPAQVNVRELSKEDAEAMPFWMRIRRGLEEGNAEPLAV EVRAMAARNPTSAFVQTILGMAEFEADHVDAALAAADTAIAIDPMAIEAHVLKGRAMLAKASRNGATPVEWNAVRAAFLK ANAIDPDHPQPLFLYYASFLSQGFKPTGNALQALSRALELAPYDRVIRAELAESQVSRAQFEEAKSTIRMLMRDPHSPLG GARIRAVMEKLDERNAEGARKLLEMSNEEFKAKQEKGDPDSGAGREAAA
Sequences:
>Translated_529_residues MRRILLRTASALAALCLAMPVQAKWYEASSKHFVVYSDRGTEQVRIMASKLERFDAALRQLTGRTDEPIAPSNRVTIFMV QSPIDVARLFGKGGNYVGGFYSSIAGASYAIVPPFIVQETGENGFAEGVLLHEYAHHFVSENQSILYPIWLNEGFAEFVS TARFEKNGSIGLGLPGQWRGWQLTHQVSVPAEMLVDSQAYFARRELAFDQFYPRAWLLYHMLTFEASREGQLAAYAGALS RGLNDRDAAIAAFGDLRQLELDLQSYGRKVTMPYYLIKGETLRPAQVNVRELSKEDAEAMPFWMRIRRGLEEGNAEPLAV EVRAMAARNPTSAFVQTILGMAEFEADHVDAALAAADTAIAIDPMAIEAHVLKGRAMLAKASRNGATPVEWNAVRAAFLK ANAIDPDHPQPLFLYYASFLSQGFKPTGNALQALSRALELAPYDRVIRAELAESQVSRAQFEEAKSTIRMLMRDPHSPLG GARIRAVMEKLDERNAEGARKLLEMSNEEFKAKQEKGDPDSGAGREAAA >Mature_529_residues MRRILLRTASALAALCLAMPVQAKWYEASSKHFVVYSDRGTEQVRIMASKLERFDAALRQLTGRTDEPIAPSNRVTIFMV QSPIDVARLFGKGGNYVGGFYSSIAGASYAIVPPFIVQETGENGFAEGVLLHEYAHHFVSENQSILYPIWLNEGFAEFVS TARFEKNGSIGLGLPGQWRGWQLTHQVSVPAEMLVDSQAYFARRELAFDQFYPRAWLLYHMLTFEASREGQLAAYAGALS RGLNDRDAAIAAFGDLRQLELDLQSYGRKVTMPYYLIKGETLRPAQVNVRELSKEDAEAMPFWMRIRRGLEEGNAEPLAV EVRAMAARNPTSAFVQTILGMAEFEADHVDAALAAADTAIAIDPMAIEAHVLKGRAMLAKASRNGATPVEWNAVRAAFLK ANAIDPDHPQPLFLYYASFLSQGFKPTGNALQALSRALELAPYDRVIRAELAESQVSRAQFEEAKSTIRMLMRDPHSPLG GARIRAVMEKLDERNAEGARKLLEMSNEEFKAKQEKGDPDSGAGREAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58512; Mature: 58512
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRILLRTASALAALCLAMPVQAKWYEASSKHFVVYSDRGTEQVRIMASKLERFDAALRQ CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH LTGRTDEPIAPSNRVTIFMVQSPIDVARLFGKGGNYVGGFYSSIAGASYAIVPPFIVQET HCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHHCCCCEEECCCHHEEEC GENGFAEGVLLHEYAHHFVSENQSILYPIWLNEGFAEFVSTARFEKNGSIGLGLPGQWRG CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEECCCCCCCCC WQLTHQVSVPAEMLVDSQAYFARRELAFDQFYPRAWLLYHMLTFEASREGQLAAYAGALS EEEEEEECCCHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHH RGLNDRDAAIAAFGDLRQLELDLQSYGRKVTMPYYLIKGETLRPAQVNVRELSKEDAEAM CCCCCCHHHHHHHHHHHHHEEEHHHCCCEEECCEEEEECCCCCCCCCCHHHHHHHHHHHH PFWMRIRRGLEEGNAEPLAVEVRAMAARNPTSAFVQTILGMAEFEADHVDAALAAADTAI HHHHHHHHHHHHCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCEE AIDPMAIEAHVLKGRAMLAKASRNGATPVEWNAVRAAFLKANAIDPDHPQPLFLYYASFL EECCHHHHHHHHHCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH SQGFKPTGNALQALSRALELAPYDRVIRAELAESQVSRAQFEEAKSTIRMLMRDPHSPLG HCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GARIRAVMEKLDERNAEGARKLLEMSNEEFKAKQEKGDPDSGAGREAAA HHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MRRILLRTASALAALCLAMPVQAKWYEASSKHFVVYSDRGTEQVRIMASKLERFDAALRQ CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH LTGRTDEPIAPSNRVTIFMVQSPIDVARLFGKGGNYVGGFYSSIAGASYAIVPPFIVQET HCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHHCCCCEEECCCHHEEEC GENGFAEGVLLHEYAHHFVSENQSILYPIWLNEGFAEFVSTARFEKNGSIGLGLPGQWRG CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEECCCCCCCCC WQLTHQVSVPAEMLVDSQAYFARRELAFDQFYPRAWLLYHMLTFEASREGQLAAYAGALS EEEEEEECCCHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHH RGLNDRDAAIAAFGDLRQLELDLQSYGRKVTMPYYLIKGETLRPAQVNVRELSKEDAEAM CCCCCCHHHHHHHHHHHHHEEEHHHCCCEEECCEEEEECCCCCCCCCCHHHHHHHHHHHH PFWMRIRRGLEEGNAEPLAVEVRAMAARNPTSAFVQTILGMAEFEADHVDAALAAADTAI HHHHHHHHHHHHCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCEE AIDPMAIEAHVLKGRAMLAKASRNGATPVEWNAVRAAFLKANAIDPDHPQPLFLYYASFL EECCHHHHHHHHHCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH SQGFKPTGNALQALSRALELAPYDRVIRAELAESQVSRAQFEEAKSTIRMLMRDPHSPLG HCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GARIRAVMEKLDERNAEGARKLLEMSNEEFKAKQEKGDPDSGAGREAAA HHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA