Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87198048

Identifier: 87198048

GI number: 87198048

Start: 17734

End: 19323

Strand: Direct

Name: 87198048

Synonym: Saro_0022

Alternate gene names: NA

Gene position: 17734-19323 (Clockwise)

Preceding gene: 87198047

Following gene: 87198051

Centisome position: 0.5

GC content: 61.45

Gene sequence:

>1590_bases
GTGCGTCGAATTTTATTAAGAACAGCCAGCGCCTTGGCGGCGCTTTGCCTCGCCATGCCAGTTCAGGCAAAATGGTACGA
GGCATCAAGCAAGCACTTCGTGGTCTATTCCGACCGCGGGACTGAACAAGTCCGGATAATGGCCTCCAAGCTCGAGCGCT
TTGACGCAGCGCTGCGTCAGCTTACCGGTCGGACTGACGAACCTATCGCCCCGTCGAACCGGGTCACCATTTTCATGGTG
CAGTCGCCGATCGATGTCGCCCGCCTGTTCGGAAAGGGCGGAAACTACGTCGGTGGCTTTTACTCCTCGATCGCAGGCGC
GTCATACGCGATCGTCCCGCCATTCATTGTGCAGGAGACCGGTGAGAACGGTTTCGCCGAGGGCGTATTGTTGCACGAGT
ACGCGCACCATTTCGTTTCGGAAAACCAGTCGATCCTCTACCCGATATGGCTGAACGAGGGATTCGCCGAGTTCGTCTCA
ACCGCACGCTTCGAGAAGAACGGTTCGATCGGCCTCGGGCTGCCAGGGCAGTGGCGCGGCTGGCAATTGACGCACCAGGT
CTCCGTGCCCGCCGAAATGCTGGTCGACAGCCAGGCCTATTTCGCGCGGCGCGAGTTGGCGTTCGACCAGTTCTACCCCC
GCGCGTGGCTGCTTTATCACATGCTGACGTTCGAGGCCTCGCGGGAAGGGCAACTCGCCGCATATGCAGGTGCGCTCAGC
CGCGGGCTGAACGACCGGGATGCCGCCATCGCGGCATTCGGCGATTTGCGTCAGCTCGAACTAGATCTTCAATCGTACGG
CCGGAAGGTCACGATGCCCTACTACCTCATAAAGGGGGAAACCTTGCGCCCCGCTCAGGTGAACGTACGGGAGCTGAGCA
AGGAAGATGCCGAAGCGATGCCCTTCTGGATGCGCATTCGCCGAGGCTTGGAAGAAGGGAACGCCGAACCGCTGGCGGTT
GAAGTTCGGGCAATGGCCGCGCGCAACCCCACGAGTGCCTTCGTGCAGACCATCCTCGGGATGGCGGAGTTCGAAGCCGA
TCATGTCGATGCTGCACTGGCCGCTGCCGACACGGCAATCGCAATCGACCCGATGGCGATCGAGGCTCACGTCCTCAAAG
GGCGCGCGATGCTGGCCAAAGCGTCCCGGAACGGCGCGACGCCCGTCGAATGGAACGCTGTGCGCGCGGCATTTCTCAAG
GCGAACGCGATCGACCCTGATCACCCGCAACCTCTGTTCCTGTACTACGCATCGTTCTTGAGTCAGGGGTTCAAGCCCAC
CGGTAACGCCTTGCAGGCTCTCTCCCGCGCGCTGGAGCTCGCGCCATACGACCGTGTAATCCGCGCGGAACTGGCGGAGA
GTCAAGTTTCTCGCGCCCAATTCGAGGAGGCGAAGTCGACGATACGCATGCTCATGCGTGATCCGCATTCTCCACTGGGC
GGCGCCCGCATCCGCGCGGTCATGGAAAAGCTCGACGAGCGCAACGCCGAAGGTGCTCGCAAACTTCTCGAGATGAGCAA
CGAGGAGTTCAAGGCAAAGCAGGAGAAGGGTGACCCAGACAGTGGCGCCGGTCGCGAGGCGGCTGCCTGA

Upstream 100 bases:

>100_bases
CCGAGGGCGCACCCTCTCCTGCAGTAACGGCCGCGCGAGTGCGTTTGCCGTTTTGAAGCAAACGGTTATGTTGCGCATTT
GGGCAGTAACCGGGGGTCTC

Downstream 100 bases:

>100_bases
CGCCCACGGCGGCCACCGCACTACTTCTCCCTCGCAAAAGAAAAAGGCCCTGCAGGAGCGATCCTGCAGGGCCTTTTCGT
TTCAGCGTGCGAAGCGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MRRILLRTASALAALCLAMPVQAKWYEASSKHFVVYSDRGTEQVRIMASKLERFDAALRQLTGRTDEPIAPSNRVTIFMV
QSPIDVARLFGKGGNYVGGFYSSIAGASYAIVPPFIVQETGENGFAEGVLLHEYAHHFVSENQSILYPIWLNEGFAEFVS
TARFEKNGSIGLGLPGQWRGWQLTHQVSVPAEMLVDSQAYFARRELAFDQFYPRAWLLYHMLTFEASREGQLAAYAGALS
RGLNDRDAAIAAFGDLRQLELDLQSYGRKVTMPYYLIKGETLRPAQVNVRELSKEDAEAMPFWMRIRRGLEEGNAEPLAV
EVRAMAARNPTSAFVQTILGMAEFEADHVDAALAAADTAIAIDPMAIEAHVLKGRAMLAKASRNGATPVEWNAVRAAFLK
ANAIDPDHPQPLFLYYASFLSQGFKPTGNALQALSRALELAPYDRVIRAELAESQVSRAQFEEAKSTIRMLMRDPHSPLG
GARIRAVMEKLDERNAEGARKLLEMSNEEFKAKQEKGDPDSGAGREAAA

Sequences:

>Translated_529_residues
MRRILLRTASALAALCLAMPVQAKWYEASSKHFVVYSDRGTEQVRIMASKLERFDAALRQLTGRTDEPIAPSNRVTIFMV
QSPIDVARLFGKGGNYVGGFYSSIAGASYAIVPPFIVQETGENGFAEGVLLHEYAHHFVSENQSILYPIWLNEGFAEFVS
TARFEKNGSIGLGLPGQWRGWQLTHQVSVPAEMLVDSQAYFARRELAFDQFYPRAWLLYHMLTFEASREGQLAAYAGALS
RGLNDRDAAIAAFGDLRQLELDLQSYGRKVTMPYYLIKGETLRPAQVNVRELSKEDAEAMPFWMRIRRGLEEGNAEPLAV
EVRAMAARNPTSAFVQTILGMAEFEADHVDAALAAADTAIAIDPMAIEAHVLKGRAMLAKASRNGATPVEWNAVRAAFLK
ANAIDPDHPQPLFLYYASFLSQGFKPTGNALQALSRALELAPYDRVIRAELAESQVSRAQFEEAKSTIRMLMRDPHSPLG
GARIRAVMEKLDERNAEGARKLLEMSNEEFKAKQEKGDPDSGAGREAAA
>Mature_529_residues
MRRILLRTASALAALCLAMPVQAKWYEASSKHFVVYSDRGTEQVRIMASKLERFDAALRQLTGRTDEPIAPSNRVTIFMV
QSPIDVARLFGKGGNYVGGFYSSIAGASYAIVPPFIVQETGENGFAEGVLLHEYAHHFVSENQSILYPIWLNEGFAEFVS
TARFEKNGSIGLGLPGQWRGWQLTHQVSVPAEMLVDSQAYFARRELAFDQFYPRAWLLYHMLTFEASREGQLAAYAGALS
RGLNDRDAAIAAFGDLRQLELDLQSYGRKVTMPYYLIKGETLRPAQVNVRELSKEDAEAMPFWMRIRRGLEEGNAEPLAV
EVRAMAARNPTSAFVQTILGMAEFEADHVDAALAAADTAIAIDPMAIEAHVLKGRAMLAKASRNGATPVEWNAVRAAFLK
ANAIDPDHPQPLFLYYASFLSQGFKPTGNALQALSRALELAPYDRVIRAELAESQVSRAQFEEAKSTIRMLMRDPHSPLG
GARIRAVMEKLDERNAEGARKLLEMSNEEFKAKQEKGDPDSGAGREAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58512; Mature: 58512

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRILLRTASALAALCLAMPVQAKWYEASSKHFVVYSDRGTEQVRIMASKLERFDAALRQ
CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
LTGRTDEPIAPSNRVTIFMVQSPIDVARLFGKGGNYVGGFYSSIAGASYAIVPPFIVQET
HCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHHCCCCEEECCCHHEEEC
GENGFAEGVLLHEYAHHFVSENQSILYPIWLNEGFAEFVSTARFEKNGSIGLGLPGQWRG
CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEECCCCCCCCC
WQLTHQVSVPAEMLVDSQAYFARRELAFDQFYPRAWLLYHMLTFEASREGQLAAYAGALS
EEEEEEECCCHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
RGLNDRDAAIAAFGDLRQLELDLQSYGRKVTMPYYLIKGETLRPAQVNVRELSKEDAEAM
CCCCCCHHHHHHHHHHHHHEEEHHHCCCEEECCEEEEECCCCCCCCCCHHHHHHHHHHHH
PFWMRIRRGLEEGNAEPLAVEVRAMAARNPTSAFVQTILGMAEFEADHVDAALAAADTAI
HHHHHHHHHHHHCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCEE
AIDPMAIEAHVLKGRAMLAKASRNGATPVEWNAVRAAFLKANAIDPDHPQPLFLYYASFL
EECCHHHHHHHHHCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
SQGFKPTGNALQALSRALELAPYDRVIRAELAESQVSRAQFEEAKSTIRMLMRDPHSPLG
HCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GARIRAVMEKLDERNAEGARKLLEMSNEEFKAKQEKGDPDSGAGREAAA
HHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRILLRTASALAALCLAMPVQAKWYEASSKHFVVYSDRGTEQVRIMASKLERFDAALRQ
CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
LTGRTDEPIAPSNRVTIFMVQSPIDVARLFGKGGNYVGGFYSSIAGASYAIVPPFIVQET
HCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHHCCCCEEECCCHHEEEC
GENGFAEGVLLHEYAHHFVSENQSILYPIWLNEGFAEFVSTARFEKNGSIGLGLPGQWRG
CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEECCCCCCCCC
WQLTHQVSVPAEMLVDSQAYFARRELAFDQFYPRAWLLYHMLTFEASREGQLAAYAGALS
EEEEEEECCCHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
RGLNDRDAAIAAFGDLRQLELDLQSYGRKVTMPYYLIKGETLRPAQVNVRELSKEDAEAM
CCCCCCHHHHHHHHHHHHHEEEHHHCCCEEECCEEEEECCCCCCCCCCHHHHHHHHHHHH
PFWMRIRRGLEEGNAEPLAVEVRAMAARNPTSAFVQTILGMAEFEADHVDAALAAADTAI
HHHHHHHHHHHHCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCEE
AIDPMAIEAHVLKGRAMLAKASRNGATPVEWNAVRAAFLKANAIDPDHPQPLFLYYASFL
EECCHHHHHHHHHCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
SQGFKPTGNALQALSRALELAPYDRVIRAELAESQVSRAQFEEAKSTIRMLMRDPHSPLG
HCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GARIRAVMEKLDERNAEGARKLLEMSNEEFKAKQEKGDPDSGAGREAAA
HHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA