Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86751805

Identifier: 86751805

GI number: 86751805

Start: 5327726

End: 5328142

Strand: Direct

Name: 86751805

Synonym: RPB_4707

Alternate gene names: NA

Gene position: 5327726-5328142 (Clockwise)

Preceding gene: 86751803

Following gene: 86751810

Centisome position: 99.93

GC content: 70.74

Gene sequence:

>417_bases
ATGCCACAGCCCTCGCTGACCAAGATCAAGCGCAACGGCAGGCCGCAGGCGCCGTGCGGCTCCGGCACCGCGCGGCGCGC
GATGGCCGTGCTGGTCATGCTGATCGCGGCCTCGTCATTGGCGCGGCCGGCCTCGGCGCAGCAACCGGCGGCGGTCATCG
TCGCGCCGCCGTTCATCGCGACGCTGTCCAACACCACACCGCTGGCGTTCGGAATGGACGCGCTGCAAGCGGAACGCGCA
CTCGGCATGCCGCTGAACTACGTCAGCGGCCGGCCCGGCGACGAGATCTTCCTGGCGATCCGCACCCACGGCGGCAGCGG
ATTCTTCAACCGCCGCGACCGGCTGTATCTGCAATTCCGCCGCGGCCGGCTGACCGGCTGGAAGGGCGACTGGGGCCGCA
ACTGGATGTGGCCGTAG

Upstream 100 bases:

>100_bases
TTTTCCGCCTCGATTTGACTGATATTGTACAGAAGCGCGCGGCCGCGCGCCGGGCTCGGGACCACGCCGCGTCGATGAGC
CGAGGATCGAAAGGACGACG

Downstream 100 bases:

>100_bases
GCCGCACGATCACGGTCGAGGCCGGGGTGAGTTTCAGAACCAGCGTTCGCTGACCATCACGGTGTCGCCGGGGCTGAGCG
GCGTGCCGAGCGGGACGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MPQPSLTKIKRNGRPQAPCGSGTARRAMAVLVMLIAASSLARPASAQQPAAVIVAPPFIATLSNTTPLAFGMDALQAERA
LGMPLNYVSGRPGDEIFLAIRTHGGSGFFNRRDRLYLQFRRGRLTGWKGDWGRNWMWP

Sequences:

>Translated_138_residues
MPQPSLTKIKRNGRPQAPCGSGTARRAMAVLVMLIAASSLARPASAQQPAAVIVAPPFIATLSNTTPLAFGMDALQAERA
LGMPLNYVSGRPGDEIFLAIRTHGGSGFFNRRDRLYLQFRRGRLTGWKGDWGRNWMWP
>Mature_137_residues
PQPSLTKIKRNGRPQAPCGSGTARRAMAVLVMLIAASSLARPASAQQPAAVIVAPPFIATLSNTTPLAFGMDALQAERAL
GMPLNYVSGRPGDEIFLAIRTHGGSGFFNRRDRLYLQFRRGRLTGWKGDWGRNWMWP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15079; Mature: 14948

Theoretical pI: Translated: 12.22; Mature: 12.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQPSLTKIKRNGRPQAPCGSGTARRAMAVLVMLIAASSLARPASAQQPAAVIVAPPFIA
CCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEE
TLSNTTPLAFGMDALQAERALGMPLNYVSGRPGDEIFLAIRTHGGSGFFNRRDRLYLQFR
ECCCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEE
RGRLTGWKGDWGRNWMWP
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PQPSLTKIKRNGRPQAPCGSGTARRAMAVLVMLIAASSLARPASAQQPAAVIVAPPFIA
CCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEE
TLSNTTPLAFGMDALQAERALGMPLNYVSGRPGDEIFLAIRTHGGSGFFNRRDRLYLQFR
ECCCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEE
RGRLTGWKGDWGRNWMWP
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA