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The map label for this gene is aapJ [H]

Identifier: 86751771

GI number: 86751771

Start: 5286022

End: 5287047

Strand: Direct

Name: aapJ [H]

Synonym: RPB_4673

Alternate gene names: 86751771

Gene position: 5286022-5287047 (Clockwise)

Preceding gene: 86751770

Following gene: 86751774

Centisome position: 99.14

GC content: 64.33

Gene sequence:

>1026_bases
ATGTCATTCCGCAAGGGCCTGCTGATCGGCCTCGGCGTCGCCGCCGTGGTCGCCGCCGCCGCCGTCACCTACGAGCGCTA
CGACACCAAGACGCTGAAGCGCACGATCCGCCGCGACGCCGTGCTGTGCGGCGTCAACAAGGGCCTGCCGGGCTTCTCGA
CGCCGGACGAAAAAGGCAACTGGACCGGTTTCGACGTCGATTTCTGCCGCGCGGTGGCGGCGGCGATCTTCAACGATCCG
AACAAGGTGAAATTCGTGCCGCTCGACGCCAACGAGCGCTTCAAGGAATTGCAGAGCCGCAAGGTCGACATCCTGTCGCG
CAATTCGACCTGGAGCATGTCGCGCGAGGCCGGCTACGAATTGTACTTCCCGGCGGTCGCCTATTACGACGGCGAGGGCT
TCATGGTGCCGTCGTCGCGCAAGATCGAGACCGCGCTCGAACTCGACGGCAGCAAGGTCTGCGTCCAGGCCGGCACCACC
ACTTTGCTCAACCTTGCCGACTACTTCCGCGCCAACAACATGAAGTATCAGGAGGTCAAGTTCCCCAAGCTCGACGAGGT
GGTCGCCGCCTACAACAGCGGACAATGCGACACCTTCTCCGCCGACGCCTCGCAGCTCTATGCGCTGCGCCAGACGCTCG
CCAAACCGGGCGATCACGTCATCCTGCCGGACCTGATCTCCAAGGAGCCGCTGGCGCCGGTGGTCCGCCAGCGCGACGAC
GAATGGATGATGATCGTGAAATGGTCGCTCTACGCGATGATCAACGCCGAGGAACTCGGCGTCACCTCGGCGAATATCGA
CGAGGCGCTGAAGTCGAAGAAGCCGGACGTGATGCGGCTGGTCGGCACCGAGGGCGCCTATGGCGAGGAGCTCGGCCTCA
GCAAGGACTGGGCGGCGCGGATCATCCGCCACGTCGGCAATTACGGCGAGGTCTACGACCGTAATGTCGGCAAGCTCGGC
ATCCCGCGTGGCCTGAACCAGCTCTGGAGCGCCGGCGGCATCCAATACGCGCCGCCGATCAGGTAG

Upstream 100 bases:

>100_bases
TCCCGGTCGGCACCAAGGTCGTGGTGCGGCAGCGCCCCGAGCTGTGACGGCCCCGCCCGCTCCGTTTCTCATTGTCATCT
GAATCAGAAAGACGTTCTCG

Downstream 100 bases:

>100_bases
GCGATCGCATTTCGAAGCGCTGCCGCACATTCAGTCGTCATCGCCCGCGCAGGCGGGCGACCCAGTATTGCAGAGCTCCG
GCGATCAGCAACGAGCGCTC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MSFRKGLLIGLGVAAVVAAAAVTYERYDTKTLKRTIRRDAVLCGVNKGLPGFSTPDEKGNWTGFDVDFCRAVAAAIFNDP
NKVKFVPLDANERFKELQSRKVDILSRNSTWSMSREAGYELYFPAVAYYDGEGFMVPSSRKIETALELDGSKVCVQAGTT
TLLNLADYFRANNMKYQEVKFPKLDEVVAAYNSGQCDTFSADASQLYALRQTLAKPGDHVILPDLISKEPLAPVVRQRDD
EWMMIVKWSLYAMINAEELGVTSANIDEALKSKKPDVMRLVGTEGAYGEELGLSKDWAARIIRHVGNYGEVYDRNVGKLG
IPRGLNQLWSAGGIQYAPPIR

Sequences:

>Translated_341_residues
MSFRKGLLIGLGVAAVVAAAAVTYERYDTKTLKRTIRRDAVLCGVNKGLPGFSTPDEKGNWTGFDVDFCRAVAAAIFNDP
NKVKFVPLDANERFKELQSRKVDILSRNSTWSMSREAGYELYFPAVAYYDGEGFMVPSSRKIETALELDGSKVCVQAGTT
TLLNLADYFRANNMKYQEVKFPKLDEVVAAYNSGQCDTFSADASQLYALRQTLAKPGDHVILPDLISKEPLAPVVRQRDD
EWMMIVKWSLYAMINAEELGVTSANIDEALKSKKPDVMRLVGTEGAYGEELGLSKDWAARIIRHVGNYGEVYDRNVGKLG
IPRGLNQLWSAGGIQYAPPIR
>Mature_340_residues
SFRKGLLIGLGVAAVVAAAAVTYERYDTKTLKRTIRRDAVLCGVNKGLPGFSTPDEKGNWTGFDVDFCRAVAAAIFNDPN
KVKFVPLDANERFKELQSRKVDILSRNSTWSMSREAGYELYFPAVAYYDGEGFMVPSSRKIETALELDGSKVCVQAGTTT
LLNLADYFRANNMKYQEVKFPKLDEVVAAYNSGQCDTFSADASQLYALRQTLAKPGDHVILPDLISKEPLAPVVRQRDDE
WMMIVKWSLYAMINAEELGVTSANIDEALKSKKPDVMRLVGTEGAYGEELGLSKDWAARIIRHVGNYGEVYDRNVGKLGI
PRGLNQLWSAGGIQYAPPIR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 37802; Mature: 37670

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRKGLLIGLGVAAVVAAAAVTYERYDTKTLKRTIRRDAVLCGVNKGLPGFSTPDEKGN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCC
WTGFDVDFCRAVAAAIFNDPNKVKFVPLDANERFKELQSRKVDILSRNSTWSMSREAGYE
CCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCEEEEECCCCCCCHHHCCCE
LYFPAVAYYDGEGFMVPSSRKIETALELDGSKVCVQAGTTTLLNLADYFRANNMKYQEVK
EEEEEEEEECCCEEECCCCCCHHHHEECCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEC
FPKLDEVVAAYNSGQCDTFSADASQLYALRQTLAKPGDHVILPDLISKEPLAPVVRQRDD
CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECHHHCCCCCCHHHHCCCC
EWMMIVKWSLYAMINAEELGVTSANIDEALKSKKPDVMRLVGTEGAYGEELGLSKDWAAR
CEEEEEEEEEEEEECHHHHCCCCCCHHHHHHCCCCCEEEEECCCCCCCHHCCCCHHHHHH
IIRHVGNYGEVYDRNVGKLGIPRGLNQLWSAGGIQYAPPIR
HHHHHCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SFRKGLLIGLGVAAVVAAAAVTYERYDTKTLKRTIRRDAVLCGVNKGLPGFSTPDEKGN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCC
WTGFDVDFCRAVAAAIFNDPNKVKFVPLDANERFKELQSRKVDILSRNSTWSMSREAGYE
CCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCEEEEECCCCCCCHHHCCCE
LYFPAVAYYDGEGFMVPSSRKIETALELDGSKVCVQAGTTTLLNLADYFRANNMKYQEVK
EEEEEEEEECCCEEECCCCCCHHHHEECCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEC
FPKLDEVVAAYNSGQCDTFSADASQLYALRQTLAKPGDHVILPDLISKEPLAPVVRQRDD
CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECHHHCCCCCCHHHHCCCC
EWMMIVKWSLYAMINAEELGVTSANIDEALKSKKPDVMRLVGTEGAYGEELGLSKDWAAR
CEEEEEEEEEEEEECHHHHCCCCCCHHHHHHCCCCCEEEEECCCCCCCHHCCCCHHHHHH
IIRHVGNYGEVYDRNVGKLGIPRGLNQLWSAGGIQYAPPIR
HHHHHCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]