Click here to switch to the map view.

The map label for this gene is cynT [C]

Identifier: 86751718

GI number: 86751718

Start: 5221591

End: 5222295

Strand: Direct

Name: cynT [C]

Synonym: RPB_4620

Alternate gene names: 86751718

Gene position: 5221591-5222295 (Clockwise)

Preceding gene: 86751717

Following gene: 86751719

Centisome position: 97.94

GC content: 65.96

Gene sequence:

>705_bases
ATGTGCGGCGCTTGCCCCAACAATGCCCTGTCTCGTCGGAAACTGTTTCAAGGCGGGCTCGGACTACTCGCCGCGGCATC
GCTGCCGCTGGCAGCCCATGCGCAGGCGAAAGAGCCGAGCGATACGCCCGAGGCGGCGCTCGACAAGCTGATGCAGGGCA
ATGCGCGCTATGTCGGCAACGAACTACGCGAGCGTGATTTCTCGTCCGGCCGGGTTGCCCGGACGCAAAGCCAATCGCCC
TTCGCCGCGATCCTGGGCTGCGCCGATTCCCGGATCGCGCCGGAACTGGCGTTCGACCAGGGGCCGGGCAGTCTGTTCGT
CGTTCGCGTCGCGGGCAATTTCGTCACGCAGGACGGGCTCGCCAGTCTCGAATACGGCGCCGCGGTGCTCGGCACCAAGG
TGATCATGGTGCTCGGCCACAGCAATTGCGGCGCGGTCAACGCCACGATCGGCGCGCTGCAGAAGGGCAATGACCTGCCC
GGTCACATCGGCGATCTGGTGCGCGCGATGAAGCCCGGGATCGAGCCCGCCCTCAAGCAGGCCGGCGACGACCTGCCGCA
GCGAGCGGTAATCGCGAACGTCCGCAGCAATGTGCAGCAGTTGCAGCAATCGAAGCCGATCCTGGCGGACATGGTCTCGG
CCGGCAAACTGAAAGTCGTCGGCGGCGTCTATGATCTGGCCAGCGGCAAGGTCACGCTGGTGTAA

Upstream 100 bases:

>100_bases
CGGATTTCACGACAGAATGAGTTGCGGTCAAAACAGCTCTTCGCGAAATCCATGTCACCGAAATACCATCTCTCCGAGGA
TCGCAAAAAGGAGAGCTGAA

Downstream 100 bases:

>100_bases
CTTCGGCGACAAGCCCCTCGCCTCTCCGGCGCGATCCGGCGCGCGTCGGATGGCGGCGCTATCGTGCGTCCATCCGCCAC
GTGTCGATCGACGCGACATC

Product: carbonic anhydrase

Products: NA

Alternate protein names: Carbonate dehydratase [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MCGACPNNALSRRKLFQGGLGLLAAASLPLAAHAQAKEPSDTPEAALDKLMQGNARYVGNELRERDFSSGRVARTQSQSP
FAAILGCADSRIAPELAFDQGPGSLFVVRVAGNFVTQDGLASLEYGAAVLGTKVIMVLGHSNCGAVNATIGALQKGNDLP
GHIGDLVRAMKPGIEPALKQAGDDLPQRAVIANVRSNVQQLQQSKPILADMVSAGKLKVVGGVYDLASGKVTLV

Sequences:

>Translated_234_residues
MCGACPNNALSRRKLFQGGLGLLAAASLPLAAHAQAKEPSDTPEAALDKLMQGNARYVGNELRERDFSSGRVARTQSQSP
FAAILGCADSRIAPELAFDQGPGSLFVVRVAGNFVTQDGLASLEYGAAVLGTKVIMVLGHSNCGAVNATIGALQKGNDLP
GHIGDLVRAMKPGIEPALKQAGDDLPQRAVIANVRSNVQQLQQSKPILADMVSAGKLKVVGGVYDLASGKVTLV
>Mature_234_residues
MCGACPNNALSRRKLFQGGLGLLAAASLPLAAHAQAKEPSDTPEAALDKLMQGNARYVGNELRERDFSSGRVARTQSQSP
FAAILGCADSRIAPELAFDQGPGSLFVVRVAGNFVTQDGLASLEYGAAVLGTKVIMVLGHSNCGAVNATIGALQKGNDLP
GHIGDLVRAMKPGIEPALKQAGDDLPQRAVIANVRSNVQQLQQSKPILADMVSAGKLKVVGGVYDLASGKVTLV

Specific function: Catalyzes the reversible hydration of carbon dioxide to form bicarbonate [H]

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI1786534, Length=163, Percent_Identity=36.8098159509202, Blast_Score=88, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765
- InterPro:   IPR015892 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 24225; Mature: 24225

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGACPNNALSRRKLFQGGLGLLAAASLPLAAHAQAKEPSDTPEAALDKLMQGNARYVGN
CCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHH
ELRERDFSSGRVARTQSQSPFAAILGCADSRIAPELAFDQGPGSLFVVRVAGNFVTQDGL
HHHHCCCCCCCEECCCCCCCHHHHHHCCCCCCCCHHCCCCCCCCEEEEEECCCCCCCCCC
ASLEYGAAVLGTKVIMVLGHSNCGAVNATIGALQKGNDLPGHIGDLVRAMKPGIEPALKQ
HHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHH
AGDDLPQRAVIANVRSNVQQLQQSKPILADMVSAGKLKVVGGVYDLASGKVTLV
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCEECCCCCEEEC
>Mature Secondary Structure
MCGACPNNALSRRKLFQGGLGLLAAASLPLAAHAQAKEPSDTPEAALDKLMQGNARYVGN
CCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHH
ELRERDFSSGRVARTQSQSPFAAILGCADSRIAPELAFDQGPGSLFVVRVAGNFVTQDGL
HHHHCCCCCCCEECCCCCCCHHHHHHCCCCCCCCHHCCCCCCCCEEEEEECCCCCCCCCC
ASLEYGAAVLGTKVIMVLGHSNCGAVNATIGALQKGNDLPGHIGDLVRAMKPGIEPALKQ
HHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHH
AGDDLPQRAVIANVRSNVQQLQQSKPILADMVSAGKLKVVGGVYDLASGKVTLV
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCEECCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA