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The map label for this gene is omp31 [H]

Identifier: 86751658

GI number: 86751658

Start: 5154398

End: 5155114

Strand: Direct

Name: omp31 [H]

Synonym: RPB_4560

Alternate gene names: 86751658

Gene position: 5154398-5155114 (Clockwise)

Preceding gene: 86751650

Following gene: 86751659

Centisome position: 96.68

GC content: 66.39

Gene sequence:

>717_bases
ATGAAAAAGTTCCTTCTCGGCACCGTTGCTCTGGTTGCCCTCGGCGCGGCTCCGGCCCTCGCCGCCGACCTCGCGGCCCG
CCCGTACAACAAGGCCCCGGTCTACGCGCCGCCGGCCCCGATCTATAACTGGACCGGCTTCTACATCGGCGGTCACATCG
GCGGCGCCTTCGCCGGCGACAACTCGATCGGCACCGGCGTCACCGCCGGCAGCGACGGCAAGTTCCTCGGCGGTGTGCAG
GTCGGTTACGACTGGCAGTTCGCTCCGAGCTGGGTGCTCGGCGTCGAAGGTCAGTACTCCTGGCTGAGCGGCACCAACGA
CGCGGTCAGCTTCACGGTCCCCGGCGTTGCCGGCACCTACACCTACGCCGACAACCAGCGCGGTCTGGCTTCGGTCACCG
GTCGCCTCGGCTACACCTGGGGTCCGGCACTGCTCTACGTCAAGGGCGGTTGGGCCTATGCCGACTACACCAGCAGCCTG
ACGCTGAGCGGCGTCGGCACCGTCTCGTCCACCAGCAGCCAGGACGGTTACACCGTCGGCGGCGGTCTCGAGTACCTGTT
CGCCCAGAACTGGTCGGGCAAGATCGAATATCAGTACTACGACTTCGGCAACGTCGATCTGGGCGCTGGCTTCACCGCCA
AGAACGACCAGCACGTCGTCAAGGCCGGCCTGAACTACCGCTTCAACTGGGGTGGCCCGGTCGTCGCCAAGTACTGA

Upstream 100 bases:

>100_bases
CCGCCAGGTGACAGCTTTTTATGCACGACCGCGCTAAATCTTGGTCCAGATGGTGACGACGAACGTCGCCTCTGTTGAAG
ACGACTCCTGGAGAACCACA

Downstream 100 bases:

>100_bases
TCCGTACTGACGAAATCCCTTCGGGGCTGAGAAGGGCCGGCTTCATGCCGGCCCTTTTTTGTTGATTTGCGCCGGGCGGA
ATTTGCATGGACAAATTGTT

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKKFLLGTVALVALGAAPALAADLAARPYNKAPVYAPPAPIYNWTGFYIGGHIGGAFAGDNSIGTGVTAGSDGKFLGGVQ
VGYDWQFAPSWVLGVEGQYSWLSGTNDAVSFTVPGVAGTYTYADNQRGLASVTGRLGYTWGPALLYVKGGWAYADYTSSL
TLSGVGTVSSTSSQDGYTVGGGLEYLFAQNWSGKIEYQYYDFGNVDLGAGFTAKNDQHVVKAGLNYRFNWGGPVVAKY

Sequences:

>Translated_238_residues
MKKFLLGTVALVALGAAPALAADLAARPYNKAPVYAPPAPIYNWTGFYIGGHIGGAFAGDNSIGTGVTAGSDGKFLGGVQ
VGYDWQFAPSWVLGVEGQYSWLSGTNDAVSFTVPGVAGTYTYADNQRGLASVTGRLGYTWGPALLYVKGGWAYADYTSSL
TLSGVGTVSSTSSQDGYTVGGGLEYLFAQNWSGKIEYQYYDFGNVDLGAGFTAKNDQHVVKAGLNYRFNWGGPVVAKY
>Mature_238_residues
MKKFLLGTVALVALGAAPALAADLAARPYNKAPVYAPPAPIYNWTGFYIGGHIGGAFAGDNSIGTGVTAGSDGKFLGGVQ
VGYDWQFAPSWVLGVEGQYSWLSGTNDAVSFTVPGVAGTYTYADNQRGLASVTGRLGYTWGPALLYVKGGWAYADYTSSL
TLSGVGTVSSTSSQDGYTVGGGLEYLFAQNWSGKIEYQYYDFGNVDLGAGFTAKNDQHVVKAGLNYRFNWGGPVVAKY

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 24991; Mature: 24991

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLLGTVALVALGAAPALAADLAARPYNKAPVYAPPAPIYNWTGFYIGGHIGGAFAGD
CCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECC
NSIGTGVTAGSDGKFLGGVQVGYDWQFAPSWVLGVEGQYSWLSGTNDAVSFTVPGVAGTY
CCCCCCEEECCCCCEEEEEEECCCEEECCCEEEECCCCEEEECCCCCEEEEEECCCCEEE
TYADNQRGLASVTGRLGYTWGPALLYVKGGWAYADYTSSLTLSGVGTVSSTSSQDGYTVG
EEECCCCCCEEHHCCCCEEECCEEEEEECCEEEEEECCEEEEEECCCCCCCCCCCCEEEC
GGLEYLFAQNWSGKIEYQYYDFGNVDLGAGFTAKNDQHVVKAGLNYRFNWGGPVVAKY
CCEEEEEECCCCCEEEEEEEECCCEEECCCCCCCCCCEEEEECCCEEEECCCCEEEEC
>Mature Secondary Structure
MKKFLLGTVALVALGAAPALAADLAARPYNKAPVYAPPAPIYNWTGFYIGGHIGGAFAGD
CCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECC
NSIGTGVTAGSDGKFLGGVQVGYDWQFAPSWVLGVEGQYSWLSGTNDAVSFTVPGVAGTY
CCCCCCEEECCCCCEEEEEEECCCEEECCCEEEECCCCEEEECCCCCEEEEEECCCCEEE
TYADNQRGLASVTGRLGYTWGPALLYVKGGWAYADYTSSLTLSGVGTVSSTSSQDGYTVG
EEECCCCCCEEHHCCCCEEECCEEEEEECCEEEEEECCEEEEEECCCCCCCCCCCCEEEC
GGLEYLFAQNWSGKIEYQYYDFGNVDLGAGFTAKNDQHVVKAGLNYRFNWGGPVVAKY
CCEEEEEECCCCCEEEEEEEECCCEEECCCCCCCCCCEEEEECCCEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]