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The map label for this gene is yhhW [C]

Identifier: 86751603

GI number: 86751603

Start: 5092712

End: 5093410

Strand: Direct

Name: yhhW [C]

Synonym: RPB_4505

Alternate gene names: 86751603

Gene position: 5092712-5093410 (Clockwise)

Preceding gene: 86751601

Following gene: 86751604

Centisome position: 95.52

GC content: 67.95

Gene sequence:

>699_bases
ATGATCGAAGTTCGACCCTTCAACAAGCTCGGCGGCGCCGACCACGGCTGGCTCAAGGCGCGGCATCACTTCTCGTTCGC
GAGCTATTACGACCCTGCCAAAATGGGCCACGGCGCCCTGCGGGTCTGGAACGACGACGAGATCGCTCCCAACACCGGCT
TTCCGCCGCACCCGCATCGCGACATGGAGATCATCACCTATGTCCGCGACGGCGCCATCACCCACGAGGATTCGCTCGGC
AACCGCGGCCGCACCGAGGCCGGCGACGTGCAGGTGATGAGCGCAGGCTCGGGCGTGCGGCATTCGGAATACAATCTGGA
GCCCGAGACCACCCGGATCTTCCAGATCTGGATCGAGCCGACGCAGGCCGGCGGCCAGCCGACCTGGGGTTCCAAGCCGT
TCCCGAAGGCCGACCGCTCCGGCAAGCTCGTCACCATCGCCTCCGGCCTCAAGGGCGACCATGACGCACTGCCGATCCGG
GCCGATGCGCGGGTGCTCGCCACCACGCTGAAGGCCGGCGAGAGCGCCGAATACGACGCCGACGCCAGCCGGCATCTCTA
TCTGGTGCCGGCGGCGGGCAGCGTCGAGGTCAACGGCGTCCGTGTCGATGCCCGCGACGGCGCCGCGATCCGCAACGAAG
CCAGGCTGACGATCACCGCGCTCGAAGACGCCGAGCTGGTGCTGGTCGACGCGGCGTAA

Upstream 100 bases:

>100_bases
GTTTCAATCATTTCTATTTCTGAAATGCAAGCGAGCCACTATTCCAATACCCAACACCTCACCGGCGCCCGATGACGGCG
CCAAACACGGGAGATTTCCC

Downstream 100 bases:

>100_bases
GGCTGCAGCCGCAAACCCGAAGCGGCGCCGTGCGTTGGCATGGCGTCGCATCGCTTCCCTCAGGTCATGCGCGGGCTTGA
CCCGCGCATCCATCCTTCTT

Product: Pirin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MIEVRPFNKLGGADHGWLKARHHFSFASYYDPAKMGHGALRVWNDDEIAPNTGFPPHPHRDMEIITYVRDGAITHEDSLG
NRGRTEAGDVQVMSAGSGVRHSEYNLEPETTRIFQIWIEPTQAGGQPTWGSKPFPKADRSGKLVTIASGLKGDHDALPIR
ADARVLATTLKAGESAEYDADASRHLYLVPAAGSVEVNGVRVDARDGAAIRNEARLTITALEDAELVLVDAA

Sequences:

>Translated_232_residues
MIEVRPFNKLGGADHGWLKARHHFSFASYYDPAKMGHGALRVWNDDEIAPNTGFPPHPHRDMEIITYVRDGAITHEDSLG
NRGRTEAGDVQVMSAGSGVRHSEYNLEPETTRIFQIWIEPTQAGGQPTWGSKPFPKADRSGKLVTIASGLKGDHDALPIR
ADARVLATTLKAGESAEYDADASRHLYLVPAAGSVEVNGVRVDARDGAAIRNEARLTITALEDAELVLVDAA
>Mature_232_residues
MIEVRPFNKLGGADHGWLKARHHFSFASYYDPAKMGHGALRVWNDDEIAPNTGFPPHPHRDMEIITYVRDGAITHEDSLG
NRGRTEAGDVQVMSAGSGVRHSEYNLEPETTRIFQIWIEPTQAGGQPTWGSKPFPKADRSGKLVTIASGLKGDHDALPIR
ADARVLATTLKAGESAEYDADASRHLYLVPAAGSVEVNGVRVDARDGAAIRNEARLTITALEDAELVLVDAA

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=124, Percent_Identity=32.258064516129, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI4505823, Length=124, Percent_Identity=32.258064516129, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1789847, Length=231, Percent_Identity=41.5584415584416, Blast_Score=180, Evalue=8e-47,
Organism=Escherichia coli, GI1789493, Length=237, Percent_Identity=32.0675105485232, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin [H]

EC number: NA

Molecular weight: Translated: 25186; Mature: 25186

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVRPFNKLGGADHGWLKARHHFSFASYYDPAKMGHGALRVWNDDEIAPNTGFPPHPHR
CEEECCCHHHCCCCCCEEEEEECCCCHHHCCHHHCCCCEEEEECCCCCCCCCCCCCCCCC
DMEIITYVRDGAITHEDSLGNRGRTEAGDVQVMSAGSGVRHSEYNLEPETTRIFQIWIEP
CCEEEEEEECCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEE
TQAGGQPTWGSKPFPKADRSGKLVTIASGLKGDHDALPIRADARVLATTLKAGESAEYDA
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCEEEEEEHHCCCCCCCCC
DASRHLYLVPAAGSVEVNGVRVDARDGAAIRNEARLTITALEDAELVLVDAA
CCCCEEEEEECCCCEEEEEEEEECCCCCEECCCCEEEEEEECCCEEEEEECC
>Mature Secondary Structure
MIEVRPFNKLGGADHGWLKARHHFSFASYYDPAKMGHGALRVWNDDEIAPNTGFPPHPHR
CEEECCCHHHCCCCCCEEEEEECCCCHHHCCHHHCCCCEEEEECCCCCCCCCCCCCCCCC
DMEIITYVRDGAITHEDSLGNRGRTEAGDVQVMSAGSGVRHSEYNLEPETTRIFQIWIEP
CCEEEEEEECCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEE
TQAGGQPTWGSKPFPKADRSGKLVTIASGLKGDHDALPIRADARVLATTLKAGESAEYDA
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCEEEEEEHHCCCCCCCCC
DASRHLYLVPAAGSVEVNGVRVDARDGAAIRNEARLTITALEDAELVLVDAA
CCCCEEEEEECCCCEEEEEEEEECCCCCEECCCCEEEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]