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The map label for this gene is ytxE [H]

Identifier: 86751586

GI number: 86751586

Start: 5075667

End: 5076692

Strand: Direct

Name: ytxE [H]

Synonym: RPB_4488

Alternate gene names: 86751586

Gene position: 5075667-5076692 (Clockwise)

Preceding gene: 86751585

Following gene: 86751587

Centisome position: 95.2

GC content: 67.93

Gene sequence:

>1026_bases
ATGGCGCTGGCCCGCGGACGGCGGCAGGAGACAGGGTTCAACTACTGGCCGGGATTCGTCGACGCGCTGTCGACGCTGAT
CCTCGGCATCGTGTTTCTGCTGTCGGTGTTTCTGGTGGTGCAATTCTTCCTGTCGCAGGAGGTCACCGGCAAGGACAAGG
CGCTGCAGGAGCTCAACGCCCGGATCGCGCAGCTCAACGATCTGTTGTCGCTGGAGAAGCTCGGCAAACTTGATATCGAG
GAGCAGCTGTCGCAAGTCCGCGCCGGCCTGTCCGCGGCGCAGAGCGAGCGCGACCGCGTCAAGGGACTGTATGACGGCCT
CGCCGGCGCCGGCAGCGACGCCGCCGGCCGCGCCGGCGAACTCGGCAAGGCGCTGGAATCGGAGAAGCAGCTTTCGGCCC
GGGCGCTGGCGCAGGTCGAGGTGCTGAACCAGCAGATCTCGGCGCTGCGCCGCCAGCTCGCGGCGCTGGAAGAGGCGCTG
GAGGCCACCGAAAGGCGCGACAAGGAATCGCAGGGCAGGATCGCCGATCTCGGCCAGCGGCTGAATCTGGCGCTGGCGCA
GCGGGTGCAGGAGCTGTCGCGCTATCGCTCGGAATTCTTCGGCCGGCTGCGCGCGATCCTTGGCGACCGCCCCGACATCC
GCATCGTCGGCGACCGCTTCGTGTTCCAGTCGGAAGTGTTCTTCGACACCGGACAGGCGCTGCTGCTGCCCGAAGGCCGC
GCCGAACTCGACAAGCTCGCCGCCGCGCTGACCGAACTCGACAAGAAGATCCCGTCGGAGATCCCCTGGGTGCTGCGCGT
CGACGGCCACACCGACCGGCGGCCGATCACCGGCGTGTTCAAATCGAACTGGGAGCTGTCGAGCGCGCGCGCGATCTCGG
TGGTGCAGTATCTGGTGTCGCTCGGCGTCCCGGCGCAGCGCCTGGTCGCCGCCGGCTTCGCCGAATTCCAGCCGCTCGAC
ACCGCCAACACAGATGAGGCCTACCGCCGCAACCGCCGCATCGAGCTGAAGCTGACGGAGCGGTGA

Upstream 100 bases:

>100_bases
GACTCGCGGAGACGCCCCCTCACCCCACCCCTCTCCCCGCGCGCGGGGAGAGGGAGCGCGCTGCCGTCGTTGCGGAGCTG
CGGCTCACAGGAGCTCATTA

Downstream 100 bases:

>100_bases
ATGGCATTGGCACCTATCAGCCGTCATGGCCGGGCTTGACCCGGCCATCCATCACGGGAAATGATTTCGAAGAAGATGGA
TGCCCGGATCAAGTCCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MALARGRRQETGFNYWPGFVDALSTLILGIVFLLSVFLVVQFFLSQEVTGKDKALQELNARIAQLNDLLSLEKLGKLDIE
EQLSQVRAGLSAAQSERDRVKGLYDGLAGAGSDAAGRAGELGKALESEKQLSARALAQVEVLNQQISALRRQLAALEEAL
EATERRDKESQGRIADLGQRLNLALAQRVQELSRYRSEFFGRLRAILGDRPDIRIVGDRFVFQSEVFFDTGQALLLPEGR
AELDKLAAALTELDKKIPSEIPWVLRVDGHTDRRPITGVFKSNWELSSARAISVVQYLVSLGVPAQRLVAAGFAEFQPLD
TANTDEAYRRNRRIELKLTER

Sequences:

>Translated_341_residues
MALARGRRQETGFNYWPGFVDALSTLILGIVFLLSVFLVVQFFLSQEVTGKDKALQELNARIAQLNDLLSLEKLGKLDIE
EQLSQVRAGLSAAQSERDRVKGLYDGLAGAGSDAAGRAGELGKALESEKQLSARALAQVEVLNQQISALRRQLAALEEAL
EATERRDKESQGRIADLGQRLNLALAQRVQELSRYRSEFFGRLRAILGDRPDIRIVGDRFVFQSEVFFDTGQALLLPEGR
AELDKLAAALTELDKKIPSEIPWVLRVDGHTDRRPITGVFKSNWELSSARAISVVQYLVSLGVPAQRLVAAGFAEFQPLD
TANTDEAYRRNRRIELKLTER
>Mature_340_residues
ALARGRRQETGFNYWPGFVDALSTLILGIVFLLSVFLVVQFFLSQEVTGKDKALQELNARIAQLNDLLSLEKLGKLDIEE
QLSQVRAGLSAAQSERDRVKGLYDGLAGAGSDAAGRAGELGKALESEKQLSARALAQVEVLNQQISALRRQLAALEEALE
ATERRDKESQGRIADLGQRLNLALAQRVQELSRYRSEFFGRLRAILGDRPDIRIVGDRFVFQSEVFFDTGQALLLPEGRA
ELDKLAAALTELDKKIPSEIPWVLRVDGHTDRRPITGVFKSNWELSSARAISVVQYLVSLGVPAQRLVAAGFAEFQPLDT
ANTDEAYRRNRRIELKLTER

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=129, Percent_Identity=36.4341085271318, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 37903; Mature: 37772

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALARGRRQETGFNYWPGFVDALSTLILGIVFLLSVFLVVQFFLSQEVTGKDKALQELNA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RIAQLNDLLSLEKLGKLDIEEQLSQVRAGLSAAQSERDRVKGLYDGLAGAGSDAAGRAGE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LGKALESEKQLSARALAQVEVLNQQISALRRQLAALEEALEATERRDKESQGRIADLGQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHH
LNLALAQRVQELSRYRSEFFGRLRAILGDRPDIRIVGDRFVFQSEVFFDTGQALLLPEGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCEEECCCCH
AELDKLAAALTELDKKIPSEIPWVLRVDGHTDRRPITGVFKSNWELSSARAISVVQYLVS
HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH
LGVPAQRLVAAGFAEFQPLDTANTDEAYRRNRRIELKLTER
HCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCC
>Mature Secondary Structure 
ALARGRRQETGFNYWPGFVDALSTLILGIVFLLSVFLVVQFFLSQEVTGKDKALQELNA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RIAQLNDLLSLEKLGKLDIEEQLSQVRAGLSAAQSERDRVKGLYDGLAGAGSDAAGRAGE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LGKALESEKQLSARALAQVEVLNQQISALRRQLAALEEALEATERRDKESQGRIADLGQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHH
LNLALAQRVQELSRYRSEFFGRLRAILGDRPDIRIVGDRFVFQSEVFFDTGQALLLPEGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCEEECCCCH
AELDKLAAALTELDKKIPSEIPWVLRVDGHTDRRPITGVFKSNWELSSARAISVVQYLVS
HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH
LGVPAQRLVAAGFAEFQPLDTANTDEAYRRNRRIELKLTER
HCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934817; 9387221; 9384377 [H]