Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86751585

Identifier: 86751585

GI number: 86751585

Start: 5074427

End: 5075425

Strand: Direct

Name: 86751585

Synonym: RPB_4487

Alternate gene names: NA

Gene position: 5074427-5075425 (Clockwise)

Preceding gene: 86751580

Following gene: 86751586

Centisome position: 95.18

GC content: 66.77

Gene sequence:

>999_bases
ATGGCATCTGGCCCCTCTTCCCGCCCGGCGATGGAGATCGAACTCACCAAGCTGTCGTCGCCGCGGATTTTCCTGGTGCG
GATGCTGGTGTTTCTGGTGCTGTGCGCGCTGATCACGGTGGTGCTGTACAAGCAGGTCATGGCCGCGTTCATGGCCAATC
CCGGGCTCAACGGTCTGATCTGCCTGGTGCTGCTGATCGGCATCGTGCTGGCGTTCCGGCAGGTGATCCGGCTGTATCCC
GAGGTCGCCTGGGTCAATACATTCCGCATCAGCGATCCGGGTCTGGCGATCGAGCGGCGGCCGACGCTGCTGGCGCCGAT
GGCCGCCCTGCTCGGCGGCGAACGCAGCGGCCGAATCACGATCTCGCCGCAGATCATGCGGCATCTGCTGGATTCGATCG
CGACCCGGCTGGACGAGGCGCGCGACATCTCGCGCTACATGACCGGACTCTTGGTGTTTCTGGGCCTGCTCGGCACGTTC
TGGGGCCTGATCGAGACGGTCGGCGCGATCGGCGGGGTGATCGGCGGGCTGAAGGTGACCGGCGACGCCGGCTCGCTGTT
CGATACGCTGAAAGAGGGCCTCGCCGCGCCGCTCGGCGGCATGGGCATCTCGTTCTCGTCGTCGCTGTTCGGCCTCGCCG
GCTCGCTGGTGCTCGGCTTCCTCGATCTGCAATCGAGCCAGGCGCAGAACCGGTTCTATACCGACCTCGAGGACTGGCTG
GCCTCGACCGTGCGCGGCGCCACCGCCGACGGCGGCATCGCCGGCAGCGGCGATCTGCAGAACGCAATCGAACGGCTGCG
GCTGACGCTGGAGGACGGCGGTGCCAACCGCGCCACCACCGCGGCGATGGCCAACCTCGCCGACGCGATTCAGAATCTCG
TCGCCCATATGCGCAACGAGCAGCAGATGATCCGCGAATGGGCCGACGCCCAGGGCGAGCAGAACCGCGAGATCAAGGAC
CTGCTGACCGCGATGGTGCGCCAGCGGGAGAAGAACTGA

Upstream 100 bases:

>100_bases
AGGGAGGTGCGGGATAACCGCTGCCGAGCCTTCCTTCCGCGTCGCACTGTGCCATATTGATGGAAACAACCCTCCCGGCA
AACCGGAGATCGAACGCGCG

Downstream 100 bases:

>100_bases
TGGCGGCGGTGCGCGAACGGCGCGCGCCTCACCTCTCCCCGCGTGCGGTGCCTCACCTCTCCCCGCGTGCGGGGAGAGGT
CGGATCGCATCGCCAGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: MotA/lQ/ExbB Proton Channel Family; Transmembrane Protein

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MASGPSSRPAMEIELTKLSSPRIFLVRMLVFLVLCALITVVLYKQVMAAFMANPGLNGLICLVLLIGIVLAFRQVIRLYP
EVAWVNTFRISDPGLAIERRPTLLAPMAALLGGERSGRITISPQIMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTF
WGLIETVGAIGGVIGGLKVTGDAGSLFDTLKEGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWL
ASTVRGATADGGIAGSGDLQNAIERLRLTLEDGGANRATTAAMANLADAIQNLVAHMRNEQQMIREWADAQGEQNREIKD
LLTAMVRQREKN

Sequences:

>Translated_332_residues
MASGPSSRPAMEIELTKLSSPRIFLVRMLVFLVLCALITVVLYKQVMAAFMANPGLNGLICLVLLIGIVLAFRQVIRLYP
EVAWVNTFRISDPGLAIERRPTLLAPMAALLGGERSGRITISPQIMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTF
WGLIETVGAIGGVIGGLKVTGDAGSLFDTLKEGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWL
ASTVRGATADGGIAGSGDLQNAIERLRLTLEDGGANRATTAAMANLADAIQNLVAHMRNEQQMIREWADAQGEQNREIKD
LLTAMVRQREKN
>Mature_331_residues
ASGPSSRPAMEIELTKLSSPRIFLVRMLVFLVLCALITVVLYKQVMAAFMANPGLNGLICLVLLIGIVLAFRQVIRLYPE
VAWVNTFRISDPGLAIERRPTLLAPMAALLGGERSGRITISPQIMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFW
GLIETVGAIGGVIGGLKVTGDAGSLFDTLKEGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWLA
STVRGATADGGIAGSGDLQNAIERLRLTLEDGGANRATTAAMANLADAIQNLVAHMRNEQQMIREWADAQGEQNREIKDL
LTAMVRQREKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35774; Mature: 35643

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGPSSRPAMEIELTKLSSPRIFLVRMLVFLVLCALITVVLYKQVMAAFMANPGLNGLI
CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
CLVLLIGIVLAFRQVIRLYPEVAWVNTFRISDPGLAIERRPTLLAPMAALLGGERSGRIT
HHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEE
ISPQIMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGAIGGVIGGLKVT
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
GDAGSLFDTLKEGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWL
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASTVRGATADGGIAGSGDLQNAIERLRLTLEDGGANRATTAAMANLADAIQNLVAHMRNE
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QQMIREWADAQGEQNREIKDLLTAMVRQREKN
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASGPSSRPAMEIELTKLSSPRIFLVRMLVFLVLCALITVVLYKQVMAAFMANPGLNGLI
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
CLVLLIGIVLAFRQVIRLYPEVAWVNTFRISDPGLAIERRPTLLAPMAALLGGERSGRIT
HHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEE
ISPQIMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGAIGGVIGGLKVT
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
GDAGSLFDTLKEGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWL
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASTVRGATADGGIAGSGDLQNAIERLRLTLEDGGANRATTAAMANLADAIQNLVAHMRNE
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QQMIREWADAQGEQNREIKDLLTAMVRQREKN
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA