| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751585
Identifier: 86751585
GI number: 86751585
Start: 5074427
End: 5075425
Strand: Direct
Name: 86751585
Synonym: RPB_4487
Alternate gene names: NA
Gene position: 5074427-5075425 (Clockwise)
Preceding gene: 86751580
Following gene: 86751586
Centisome position: 95.18
GC content: 66.77
Gene sequence:
>999_bases ATGGCATCTGGCCCCTCTTCCCGCCCGGCGATGGAGATCGAACTCACCAAGCTGTCGTCGCCGCGGATTTTCCTGGTGCG GATGCTGGTGTTTCTGGTGCTGTGCGCGCTGATCACGGTGGTGCTGTACAAGCAGGTCATGGCCGCGTTCATGGCCAATC CCGGGCTCAACGGTCTGATCTGCCTGGTGCTGCTGATCGGCATCGTGCTGGCGTTCCGGCAGGTGATCCGGCTGTATCCC GAGGTCGCCTGGGTCAATACATTCCGCATCAGCGATCCGGGTCTGGCGATCGAGCGGCGGCCGACGCTGCTGGCGCCGAT GGCCGCCCTGCTCGGCGGCGAACGCAGCGGCCGAATCACGATCTCGCCGCAGATCATGCGGCATCTGCTGGATTCGATCG CGACCCGGCTGGACGAGGCGCGCGACATCTCGCGCTACATGACCGGACTCTTGGTGTTTCTGGGCCTGCTCGGCACGTTC TGGGGCCTGATCGAGACGGTCGGCGCGATCGGCGGGGTGATCGGCGGGCTGAAGGTGACCGGCGACGCCGGCTCGCTGTT CGATACGCTGAAAGAGGGCCTCGCCGCGCCGCTCGGCGGCATGGGCATCTCGTTCTCGTCGTCGCTGTTCGGCCTCGCCG GCTCGCTGGTGCTCGGCTTCCTCGATCTGCAATCGAGCCAGGCGCAGAACCGGTTCTATACCGACCTCGAGGACTGGCTG GCCTCGACCGTGCGCGGCGCCACCGCCGACGGCGGCATCGCCGGCAGCGGCGATCTGCAGAACGCAATCGAACGGCTGCG GCTGACGCTGGAGGACGGCGGTGCCAACCGCGCCACCACCGCGGCGATGGCCAACCTCGCCGACGCGATTCAGAATCTCG TCGCCCATATGCGCAACGAGCAGCAGATGATCCGCGAATGGGCCGACGCCCAGGGCGAGCAGAACCGCGAGATCAAGGAC CTGCTGACCGCGATGGTGCGCCAGCGGGAGAAGAACTGA
Upstream 100 bases:
>100_bases AGGGAGGTGCGGGATAACCGCTGCCGAGCCTTCCTTCCGCGTCGCACTGTGCCATATTGATGGAAACAACCCTCCCGGCA AACCGGAGATCGAACGCGCG
Downstream 100 bases:
>100_bases TGGCGGCGGTGCGCGAACGGCGCGCGCCTCACCTCTCCCCGCGTGCGGTGCCTCACCTCTCCCCGCGTGCGGGGAGAGGT CGGATCGCATCGCCAGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel Family; Transmembrane Protein
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MASGPSSRPAMEIELTKLSSPRIFLVRMLVFLVLCALITVVLYKQVMAAFMANPGLNGLICLVLLIGIVLAFRQVIRLYP EVAWVNTFRISDPGLAIERRPTLLAPMAALLGGERSGRITISPQIMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTF WGLIETVGAIGGVIGGLKVTGDAGSLFDTLKEGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWL ASTVRGATADGGIAGSGDLQNAIERLRLTLEDGGANRATTAAMANLADAIQNLVAHMRNEQQMIREWADAQGEQNREIKD LLTAMVRQREKN
Sequences:
>Translated_332_residues MASGPSSRPAMEIELTKLSSPRIFLVRMLVFLVLCALITVVLYKQVMAAFMANPGLNGLICLVLLIGIVLAFRQVIRLYP EVAWVNTFRISDPGLAIERRPTLLAPMAALLGGERSGRITISPQIMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTF WGLIETVGAIGGVIGGLKVTGDAGSLFDTLKEGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWL ASTVRGATADGGIAGSGDLQNAIERLRLTLEDGGANRATTAAMANLADAIQNLVAHMRNEQQMIREWADAQGEQNREIKD LLTAMVRQREKN >Mature_331_residues ASGPSSRPAMEIELTKLSSPRIFLVRMLVFLVLCALITVVLYKQVMAAFMANPGLNGLICLVLLIGIVLAFRQVIRLYPE VAWVNTFRISDPGLAIERRPTLLAPMAALLGGERSGRITISPQIMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFW GLIETVGAIGGVIGGLKVTGDAGSLFDTLKEGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWLA STVRGATADGGIAGSGDLQNAIERLRLTLEDGGANRATTAAMANLADAIQNLVAHMRNEQQMIREWADAQGEQNREIKDL LTAMVRQREKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35774; Mature: 35643
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGPSSRPAMEIELTKLSSPRIFLVRMLVFLVLCALITVVLYKQVMAAFMANPGLNGLI CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH CLVLLIGIVLAFRQVIRLYPEVAWVNTFRISDPGLAIERRPTLLAPMAALLGGERSGRIT HHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEE ISPQIMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGAIGGVIGGLKVT ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE GDAGSLFDTLKEGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWL CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASTVRGATADGGIAGSGDLQNAIERLRLTLEDGGANRATTAAMANLADAIQNLVAHMRNE HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QQMIREWADAQGEQNREIKDLLTAMVRQREKN HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure ASGPSSRPAMEIELTKLSSPRIFLVRMLVFLVLCALITVVLYKQVMAAFMANPGLNGLI CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH CLVLLIGIVLAFRQVIRLYPEVAWVNTFRISDPGLAIERRPTLLAPMAALLGGERSGRIT HHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEE ISPQIMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGAIGGVIGGLKVT ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE GDAGSLFDTLKEGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWL CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASTVRGATADGGIAGSGDLQNAIERLRLTLEDGGANRATTAAMANLADAIQNLVAHMRNE HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QQMIREWADAQGEQNREIKDLLTAMVRQREKN HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA