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The map label for this gene is ybeQ [H]

Identifier: 86751571

GI number: 86751571

Start: 5062939

End: 5064039

Strand: Direct

Name: ybeQ [H]

Synonym: RPB_4473

Alternate gene names: 86751571

Gene position: 5062939-5064039 (Clockwise)

Preceding gene: 86751570

Following gene: 86751572

Centisome position: 94.96

GC content: 68.94

Gene sequence:

>1101_bases
ATGAAGGCGCTACGCCCGATCTCGATCGCTGCGGCCATGCTGCTGCTCGCCACCGGCGCGTCGGCGCAATTGTCGCTGAC
GCCGTCGCCGCCCAACCCGTTTCCCAAGCCGCTGGAACCGGAAAAGCCCAAGCCGCGGCCGAAACCTGCCGCCGCCCCGG
CCGACAAGGACAAGGCGAAAAAGCCTTCCGCCGACAAGGCCGGCGCGGCCAAGTCCGGCGCTACGGCGGAGGGCGCAGAG
ACCACCACCGATGTCGACGATCCCAATGTCGATCTGGTCTATGGCGCGTATCAGCGCGGGTTCTACAAGACCGCGTTCGA
AATCGCGCTGCAGCGCGCCCGGGATTTCAACGATCCCAAGGCGATGACGATGCTGGGCGAGCTTTACGCCAACGCGCTCG
GAATCAAGCGCGACTACGACAAGGCGGTGGAATGGTACAGGCGCGCCGCCGATCTCGGCGACCGCGAGGCGATGTTCGCG
CTGGCCATGGCGCGGATGGCGGGGCGCGGCGGCGGGCCGGCGAACCGCGAGGAAGCCGCCAAATGGCTGGCGTCCTCGGC
CAAGCTCGGCGAGCCGCGCGCGGCGTATAATCTGGCGCTGCTGTATCTCGACGGCCAGACCTTCCCGCAGGACATCAAGC
GCTCCGCCGAACTGCTGCGGGTGGCCGCCGACGCCGGCAATCCCGAGGCACAATATGCGCTGGCGACCTTCTACAAGGAG
GGCACCGGGGTGGAGAAGAACGTCGAGCAGTCGGTGCGGCTGCTGCAGGCCGCGGCGGTCGCCGGCAATGTTCCCGCCGA
GGTCGAATACGCGATCGCGCTCTACAACGGCACCGGCACGGTGAAGAACGAGCCGGCCGCGGTGGCGCTGCTGCGCAAGG
CGGCGCGCGCCAACAACCCGATCGCGCAGAACCGGCTGGCGCATGTGCTGCTCAGCGGCCAGGGCGCGCCGCGCGACCCG
GTCGAGGCGATCAAATGGCACCTGGTCGCCAAGACCGCCGGCAAGGGCGACCTGATGCTCGACGAGGCGCAGGCCCAGCT
CAGCGCCGAGGACCGCGCCAAGGCCCAGGAGGCCGCGAAGAAATGGGTCGGCGGGAAATGA

Upstream 100 bases:

>100_bases
GGCCGAAGCGGACGGCGCTGCGGCGGCGCTCGCGGACGCCGAGGCGGCGCTGAAGCAGGGCTTCGCCGGGACCGCGCCGG
CGCCGGCGCAAGGATAATCC

Downstream 100 bases:

>100_bases
TCCGGGGTTGACGCGCCCCCCTGCGCAGGGCACCCCTTCGGCATAATCCCCCCAAAAACCTCATTCAGACCTGTCGCAGG
TCGCTGCGAGACCTCAGTCC

Product: Sel1-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKALRPISIAAAMLLLATGASAQLSLTPSPPNPFPKPLEPEKPKPRPKPAAAPADKDKAKKPSADKAGAAKSGATAEGAE
TTTDVDDPNVDLVYGAYQRGFYKTAFEIALQRARDFNDPKAMTMLGELYANALGIKRDYDKAVEWYRRAADLGDREAMFA
LAMARMAGRGGGPANREEAAKWLASSAKLGEPRAAYNLALLYLDGQTFPQDIKRSAELLRVAADAGNPEAQYALATFYKE
GTGVEKNVEQSVRLLQAAAVAGNVPAEVEYAIALYNGTGTVKNEPAAVALLRKAARANNPIAQNRLAHVLLSGQGAPRDP
VEAIKWHLVAKTAGKGDLMLDEAQAQLSAEDRAKAQEAAKKWVGGK

Sequences:

>Translated_366_residues
MKALRPISIAAAMLLLATGASAQLSLTPSPPNPFPKPLEPEKPKPRPKPAAAPADKDKAKKPSADKAGAAKSGATAEGAE
TTTDVDDPNVDLVYGAYQRGFYKTAFEIALQRARDFNDPKAMTMLGELYANALGIKRDYDKAVEWYRRAADLGDREAMFA
LAMARMAGRGGGPANREEAAKWLASSAKLGEPRAAYNLALLYLDGQTFPQDIKRSAELLRVAADAGNPEAQYALATFYKE
GTGVEKNVEQSVRLLQAAAVAGNVPAEVEYAIALYNGTGTVKNEPAAVALLRKAARANNPIAQNRLAHVLLSGQGAPRDP
VEAIKWHLVAKTAGKGDLMLDEAQAQLSAEDRAKAQEAAKKWVGGK
>Mature_366_residues
MKALRPISIAAAMLLLATGASAQLSLTPSPPNPFPKPLEPEKPKPRPKPAAAPADKDKAKKPSADKAGAAKSGATAEGAE
TTTDVDDPNVDLVYGAYQRGFYKTAFEIALQRARDFNDPKAMTMLGELYANALGIKRDYDKAVEWYRRAADLGDREAMFA
LAMARMAGRGGGPANREEAAKWLASSAKLGEPRAAYNLALLYLDGQTFPQDIKRSAELLRVAADAGNPEAQYALATFYKE
GTGVEKNVEQSVRLLQAAAVAGNVPAEVEYAIALYNGTGTVKNEPAAVALLRKAARANNPIAQNRLAHVLLSGQGAPRDP
VEAIKWHLVAKTAGKGDLMLDEAQAQLSAEDRAKAQEAAKKWVGGK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=177, Percent_Identity=28.2485875706215, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI19923669, Length=243, Percent_Identity=22.6337448559671, Blast_Score=69, Evalue=5e-12,
Organism=Escherichia coli, GI87081769, Length=216, Percent_Identity=31.9444444444444, Blast_Score=79, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17563256, Length=226, Percent_Identity=31.858407079646, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21355295, Length=182, Percent_Identity=25.8241758241758, Blast_Score=72, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 38918; Mature: 38918

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALRPISIAAAMLLLATGASAQLSLTPSPPNPFPKPLEPEKPKPRPKPAAAPADKDKAK
CCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC
KPSADKAGAAKSGATAEGAETTTDVDDPNVDLVYGAYQRGFYKTAFEIALQRARDFNDPK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHH
AMTMLGELYANALGIKRDYDKAVEWYRRAADLGDREAMFALAMARMAGRGGGPANREEAA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH
KWLASSAKLGEPRAAYNLALLYLDGQTFPQDIKRSAELLRVAADAGNPEAQYALATFYKE
HHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
GTGVEKNVEQSVRLLQAAAVAGNVPAEVEYAIALYNGTGTVKNEPAAVALLRKAARANNP
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
IAQNRLAHVLLSGQGAPRDPVEAIKWHLVAKTAGKGDLMLDEAQAQLSAEDRAKAQEAAK
HHHHHHHHHHCCCCCCCCCHHHHHHHHHEEECCCCCCEEEHHHHHHHCHHHHHHHHHHHH
KWVGGK
HHCCCC
>Mature Secondary Structure
MKALRPISIAAAMLLLATGASAQLSLTPSPPNPFPKPLEPEKPKPRPKPAAAPADKDKAK
CCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC
KPSADKAGAAKSGATAEGAETTTDVDDPNVDLVYGAYQRGFYKTAFEIALQRARDFNDPK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHH
AMTMLGELYANALGIKRDYDKAVEWYRRAADLGDREAMFALAMARMAGRGGGPANREEAA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH
KWLASSAKLGEPRAAYNLALLYLDGQTFPQDIKRSAELLRVAADAGNPEAQYALATFYKE
HHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
GTGVEKNVEQSVRLLQAAAVAGNVPAEVEYAIALYNGTGTVKNEPAAVALLRKAARANNP
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
IAQNRLAHVLLSGQGAPRDPVEAIKWHLVAKTAGKGDLMLDEAQAQLSAEDRAKAQEAAK
HHHHHHHHHHCCCCCCCCCHHHHHHHHHEEECCCCCCEEEHHHHHHHCHHHHHHHHHHHH
KWVGGK
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]