| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751529
Identifier: 86751529
GI number: 86751529
Start: 5016527
End: 5018599
Strand: Direct
Name: 86751529
Synonym: RPB_4428
Alternate gene names: NA
Gene position: 5016527-5018599 (Clockwise)
Preceding gene: 86751528
Following gene: 86751530
Centisome position: 94.09
GC content: 68.64
Gene sequence:
>2073_bases ATGACGCCCGCCCGCCTGGCCGTCGATATCGGCGGCACGTTCACGGATTTCGCGCTCGAAGTGGGCGACAAGCGCTACAG CCGCAAGGTGCTGACGACGCCGACCGCGCCCGAACAGGGCGTGCTCACCGGCGTCGGCCTGATCATGCAGGATGCCGGCC TCGCGCCTTCCGATCTCGGCCTGATCATTCACGGCACCACGCTCGCCACCAACGCGATCATCGAACGCAAGGGCGCGAAG ACGGCGCTGCTGGCGACGCGCGGTTTTCGCGATGCCATCGAGATGGCCTATGAGCATCGCTTCGAGCAATACGACATCTT CATGGACAAGCCGCCGCCGCTGGTGCCGCGGAATCTGCGCCTCGAAGTGCCGGAGCGCATCGACGCCAACGGCGGCGTCG TCGAACCGCTCGACGAGGCCGCCCTCGCCGGTCTCGTGCCGATCTTGCGCGCCGAAGGCGTGACCAGCGTCGCGCTCGGC TATCTGCACTCTTACGCCAATCCGGCCCACGAGATCCGCAGCCGCGACATCCTCACCACGCTGGCGCCCGACCTCGCCAT CACCATGTCGAGCGAGGTCTGCCCGGAGATGCGCGAATACGAGCGCTGGTCCACGGCCTGCGCCAACGCCTATGTGCAGC CGGTGATGGACCGCTATCTGAAGCTGCTCGAGGAAGCGTTGCGCGCCCGCGGCTTCCGCTGTCCGATCTATCTCATTACG TCCGCCGGCGGCCTGACCACCGTCGAGATCGCGCGGCGCTTCCCGATCCGCCTCGTCGAATCCGGCCCGGCCGGCGGCGC CATTCTGGCCGCGCATATCGCCAACGAACGCCGGCACGATCATATCGTGTCGTTCGACATGGGCGGCACCACCGCGAAGA TCTGCCTGATCGATCATGGCGAGCCGCATTTCGAACGCTCCTTCGAAGTCGCGCGGCAATATCGTTTTCTGAAGGGCAGC GGGATTCCGATCCGCATCCCGGTGATCGAGATGGTCGAGATCGGCGCCGGCGGCGGCTCGATCGCGTCGGTCGATGCCAT GCAACGCGTCCAGGTCGGCCCGGCGAGCGCCGGCTCCGAGCCGGGCCCGGCCTGTTACGGCCGCGGCGGCGCGAACGGCA CGGTGACCGACGCCAATCTGCTGCTCGGGCGTCTGCAGGCCGATCGCTTCGCCGGCGGCAAAATGCAGCTCGATACCAAC GCATCGGCCGCCGCCCTGCAGGCCTCGGTCGGTCGCGCGTTGTCGCTCGATGCCGCGACGGCGGCGCTCGGTGTCATCGA GGTGGTCGAGGAGAACATGGCCAATGCCGCGCGCGTCCATGCGGTCGAGCGTGGCCGCGAACTCGCCAATCGCGTCATGA TCGCGTTCGGCGGTGCCGCACCGATTCATGCCGCCCGCCTCGCCGAGAAGCTCGACATTGCGACGGTGATCGTCCCGGCC GGCGCCGGCGTCGGCTCCGCCTTCGGCTTCCTACTGGCGCCGATCGCCTACGAGGTGGTGCGCACGCGCCATGTGCGGCT CGATGACGGTTTCGATCCGGCGCCGCTCAACGCGCTGCGCAGCGAGATGCGCAAGGAGGCCGAAGACGTCGTCCGCCTCG GCGCGCCGACCGCCGAGCTCGTGGAAGGCTGGAGCGCCAGCATGCGCTATCGCGGCCAGGGCCACGAACTCACCGTCACC ATCCCGGCGAGCGATTTCACCGCGGGCTCGGTCGCCGAGCTGGAGCGGCTGTTCCTCGCCGATTACGAACAGCAATTCGG CCGCCGGATTCCCGACCTCGACGTCGAGATTCTCGGCTGGTCGCTGCGGCTCGCCACCGTCAGTCCGCCGATCCTCCCCT GCCCGCCAATGCCGTCCGGCACGGCCGCCGAGCCGGCGGCGCATGTCGATGTCGTGGCGCCGCAGACCGGCAAGACGGAA TCCATCGCGCTCCACACTCGCCGCGACCTCGTGCCGGGCGCGATCGTCGCGGGCCCCGCGCTGATCGTCGAGGACGAAAC CACGACGATGGTGACCCACCGCTACACCGCCCGCATCGACGCGCTCGGCAGCATCGTCATGACGAGGACCTGA
Upstream 100 bases:
>100_bases TCGGCCGCAAGTTTCTCGAAGGCCCTGCCCGCGAAGTGCGCGACGATCCGCGCATCCGCGAGGCCTATCTGGGCGGCAAC ATCAAGGAGACGATCGAGGA
Downstream 100 bases:
>100_bases TCATGGACGTCCACGCCCCTCACGCCGATCCGATGAACGTGATCCATCAGCAGATCATGTGGGATCGCCTGATCTCCGTG GTCGAAGAACAGGCCCAGAC
Product: 5-oxoprolinase (ATP-hydrolyzing)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 690; Mature: 689
Protein sequence:
>690_residues MTPARLAVDIGGTFTDFALEVGDKRYSRKVLTTPTAPEQGVLTGVGLIMQDAGLAPSDLGLIIHGTTLATNAIIERKGAK TALLATRGFRDAIEMAYEHRFEQYDIFMDKPPPLVPRNLRLEVPERIDANGGVVEPLDEAALAGLVPILRAEGVTSVALG YLHSYANPAHEIRSRDILTTLAPDLAITMSSEVCPEMREYERWSTACANAYVQPVMDRYLKLLEEALRARGFRCPIYLIT SAGGLTTVEIARRFPIRLVESGPAGGAILAAHIANERRHDHIVSFDMGGTTAKICLIDHGEPHFERSFEVARQYRFLKGS GIPIRIPVIEMVEIGAGGGSIASVDAMQRVQVGPASAGSEPGPACYGRGGANGTVTDANLLLGRLQADRFAGGKMQLDTN ASAAALQASVGRALSLDAATAALGVIEVVEENMANAARVHAVERGRELANRVMIAFGGAAPIHAARLAEKLDIATVIVPA GAGVGSAFGFLLAPIAYEVVRTRHVRLDDGFDPAPLNALRSEMRKEAEDVVRLGAPTAELVEGWSASMRYRGQGHELTVT IPASDFTAGSVAELERLFLADYEQQFGRRIPDLDVEILGWSLRLATVSPPILPCPPMPSGTAAEPAAHVDVVAPQTGKTE SIALHTRRDLVPGAIVAGPALIVEDETTTMVTHRYTARIDALGSIVMTRT
Sequences:
>Translated_690_residues MTPARLAVDIGGTFTDFALEVGDKRYSRKVLTTPTAPEQGVLTGVGLIMQDAGLAPSDLGLIIHGTTLATNAIIERKGAK TALLATRGFRDAIEMAYEHRFEQYDIFMDKPPPLVPRNLRLEVPERIDANGGVVEPLDEAALAGLVPILRAEGVTSVALG YLHSYANPAHEIRSRDILTTLAPDLAITMSSEVCPEMREYERWSTACANAYVQPVMDRYLKLLEEALRARGFRCPIYLIT SAGGLTTVEIARRFPIRLVESGPAGGAILAAHIANERRHDHIVSFDMGGTTAKICLIDHGEPHFERSFEVARQYRFLKGS GIPIRIPVIEMVEIGAGGGSIASVDAMQRVQVGPASAGSEPGPACYGRGGANGTVTDANLLLGRLQADRFAGGKMQLDTN ASAAALQASVGRALSLDAATAALGVIEVVEENMANAARVHAVERGRELANRVMIAFGGAAPIHAARLAEKLDIATVIVPA GAGVGSAFGFLLAPIAYEVVRTRHVRLDDGFDPAPLNALRSEMRKEAEDVVRLGAPTAELVEGWSASMRYRGQGHELTVT IPASDFTAGSVAELERLFLADYEQQFGRRIPDLDVEILGWSLRLATVSPPILPCPPMPSGTAAEPAAHVDVVAPQTGKTE SIALHTRRDLVPGAIVAGPALIVEDETTTMVTHRYTARIDALGSIVMTRT >Mature_689_residues TPARLAVDIGGTFTDFALEVGDKRYSRKVLTTPTAPEQGVLTGVGLIMQDAGLAPSDLGLIIHGTTLATNAIIERKGAKT ALLATRGFRDAIEMAYEHRFEQYDIFMDKPPPLVPRNLRLEVPERIDANGGVVEPLDEAALAGLVPILRAEGVTSVALGY LHSYANPAHEIRSRDILTTLAPDLAITMSSEVCPEMREYERWSTACANAYVQPVMDRYLKLLEEALRARGFRCPIYLITS AGGLTTVEIARRFPIRLVESGPAGGAILAAHIANERRHDHIVSFDMGGTTAKICLIDHGEPHFERSFEVARQYRFLKGSG IPIRIPVIEMVEIGAGGGSIASVDAMQRVQVGPASAGSEPGPACYGRGGANGTVTDANLLLGRLQADRFAGGKMQLDTNA SAAALQASVGRALSLDAATAALGVIEVVEENMANAARVHAVERGRELANRVMIAFGGAAPIHAARLAEKLDIATVIVPAG AGVGSAFGFLLAPIAYEVVRTRHVRLDDGFDPAPLNALRSEMRKEAEDVVRLGAPTAELVEGWSASMRYRGQGHELTVTI PASDFTAGSVAELERLFLADYEQQFGRRIPDLDVEILGWSLRLATVSPPILPCPPMPSGTAAEPAAHVDVVAPQTGKTES IALHTRRDLVPGAIVAGPALIVEDETTTMVTHRYTARIDALGSIVMTRT
Specific function: Unknown
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=738, Percent_Identity=29.4037940379404, Blast_Score=191, Evalue=2e-48, Organism=Caenorhabditis elegans, GI133901900, Length=398, Percent_Identity=31.4070351758794, Blast_Score=129, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6322634, Length=549, Percent_Identity=29.143897996357, Blast_Score=193, Evalue=9e-50, Organism=Drosophila melanogaster, GI45550492, Length=743, Percent_Identity=29.6096904441454, Blast_Score=218, Evalue=1e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: NA
Molecular weight: Translated: 73632; Mature: 73501
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPARLAVDIGGTFTDFALEVGDKRYSRKVLTTPTAPEQGVLTGVGLIMQDAGLAPSDLG CCCCEEEEECCCCHHHHHHHHCCHHHCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCE LIIHGTTLATNAIIERKGAKTALLATRGFRDAIEMAYEHRFEQYDIFMDKPPPLVPRNLR EEEECCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCE LEVPERIDANGGVVEPLDEAALAGLVPILRAEGVTSVALGYLHSYANPAHEIRSRDILTT ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCHHHHH LAPDLAITMSSEVCPEMREYERWSTACANAYVQPVMDRYLKLLEEALRARGFRCPIYLIT HCCCEEEEECHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE SAGGLTTVEIARRFPIRLVESGPAGGAILAAHIANERRHDHIVSFDMGGTTAKICLIDHG CCCCCEEHHHHHCCCEEEEECCCCCCEEEEEEHHCCCCCCCEEEEECCCCEEEEEEEECC EPHFERSFEVARQYRFLKGSGIPIRIPVIEMVEIGAGGGSIASVDAMQRVQVGPASAGSE CCHHHHHHHHHHHHHHHCCCCCEEEEEHEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCC PGPACYGRGGANGTVTDANLLLGRLQADRFAGGKMQLDTNASAAALQASVGRALSLDAAT CCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCEEECHHHH AALGVIEVVEENMANAARVHAVERGRELANRVMIAFGGAAPIHAARLAEKLDIATVIVPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCEEEEEEEC GAGVGSAFGFLLAPIAYEVVRTRHVRLDDGFDPAPLNALRSEMRKEAEDVVRLGAPTAEL CCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH VEGWSASMRYRGQGHELTVTIPASDFTAGSVAELERLFLADYEQQFGRRIPDLDVEILGW HCCCCCCEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE SLRLATVSPPILPCPPMPSGTAAEPAAHVDVVAPQTGKTESIALHTRRDLVPGAIVAGPA EEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHCCCCCCCCCCCE LIVEDETTTMVTHRYTARIDALGSIVMTRT EEEECCCEEEEEEEHHHHHHHHCCEEEECC >Mature Secondary Structure TPARLAVDIGGTFTDFALEVGDKRYSRKVLTTPTAPEQGVLTGVGLIMQDAGLAPSDLG CCCEEEEECCCCHHHHHHHHCCHHHCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCE LIIHGTTLATNAIIERKGAKTALLATRGFRDAIEMAYEHRFEQYDIFMDKPPPLVPRNLR EEEECCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCE LEVPERIDANGGVVEPLDEAALAGLVPILRAEGVTSVALGYLHSYANPAHEIRSRDILTT ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCHHHHH LAPDLAITMSSEVCPEMREYERWSTACANAYVQPVMDRYLKLLEEALRARGFRCPIYLIT HCCCEEEEECHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE SAGGLTTVEIARRFPIRLVESGPAGGAILAAHIANERRHDHIVSFDMGGTTAKICLIDHG CCCCCEEHHHHHCCCEEEEECCCCCCEEEEEEHHCCCCCCCEEEEECCCCEEEEEEEECC EPHFERSFEVARQYRFLKGSGIPIRIPVIEMVEIGAGGGSIASVDAMQRVQVGPASAGSE CCHHHHHHHHHHHHHHHCCCCCEEEEEHEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCC PGPACYGRGGANGTVTDANLLLGRLQADRFAGGKMQLDTNASAAALQASVGRALSLDAAT CCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCEEECHHHH AALGVIEVVEENMANAARVHAVERGRELANRVMIAFGGAAPIHAARLAEKLDIATVIVPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCEEEEEEEC GAGVGSAFGFLLAPIAYEVVRTRHVRLDDGFDPAPLNALRSEMRKEAEDVVRLGAPTAEL CCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH VEGWSASMRYRGQGHELTVTIPASDFTAGSVAELERLFLADYEQQFGRRIPDLDVEILGW HCCCCCCEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE SLRLATVSPPILPCPPMPSGTAAEPAAHVDVVAPQTGKTESIALHTRRDLVPGAIVAGPA EEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHCCCCCCCCCCCE LIVEDETTTMVTHRYTARIDALGSIVMTRT EEEECCCEEEEEEEHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]