| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fno [H]
Identifier: 86751510
GI number: 86751510
Start: 4996713
End: 4997378
Strand: Reverse
Name: fno [H]
Synonym: RPB_4409
Alternate gene names: 86751510
Gene position: 4997378-4996713 (Counterclockwise)
Preceding gene: 86751511
Following gene: 86751509
Centisome position: 93.73
GC content: 68.02
Gene sequence:
>666_bases ATGACTGCAACAATTCATACGATCTGTGTCGTCGGCGGCACCGGCGCCGAAGGCGGCGGACTGGCGCTGCGCTGGGCCAA GCACGGCCACCGCGTGATCATCGCCTCGCGCGACGCCGCGAAGGCCAAGGCGGCGGCCGACGAGCTCAATGCCCGTCTCG GCGGCGGCACAGCCGAAGGCGCCGACAGCGCCTCCGGCGTGGCGGAAGCCGACATCGTGGTGTTGACCGTGCCGTATCAG GCGCAGATCGCGACCGTGCAGGGGCTGAAGGACGCGCTGCAGGGCAAGATCCTGATCGACGTCACCGTGCCGCTGGTGCC GCCCAAGGTCACCCGGGTGCAGCTGCCGGAGACCGATTCCTGCGTCGTCGCGGTGCAGACGCTGCTTGGCGACGGCGTGC GGGTGGTGTCGGCGTTCCAGAACGTCTCGGCCCACAAGCTGAAGGATCCGGACTACGCGATCGACTGCGACGTGCTGGTC GCCGGCGACGACAAGGAGGCGCGCGCCACCGTGATGCAGCTCGCCGTCGACGCCGGCCTGCGCGGCATCGACATCGGGCC GCTGGCCAATTCGGTGGTGTCGGAGAGCCTCACTTCGGCGCTGATCTGGATCAATAAATTCTATAAGATTCCCGACGCGG GAGTGCGGATCACCGGCCTCCCCTGA
Upstream 100 bases:
>100_bases GGCCTATGCCCCGGTCGCCCGCATCGGCGGCCGCAACTACGTGCGGCTCGGCGACATCGTCGAAGTATAAGCCGTCGCTG ATAGCAGAACAGAGGATGCC
Downstream 100 bases:
>100_bases GGAGAGTCGATTGTCGGTCCGACGTGCTTTGGAGATATTTGCCCTGGAGGGCGTGCCGCTGGTCGAGCCCGGTGACGACC TGGCCGGTCTGATCCTGGCA
Product: NADPH-dependent F420 reductase
Products: NA
Alternate protein names: F420H2:NADP oxidoreductase [H]
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MTATIHTICVVGGTGAEGGGLALRWAKHGHRVIIASRDAAKAKAAADELNARLGGGTAEGADSASGVAEADIVVLTVPYQ AQIATVQGLKDALQGKILIDVTVPLVPPKVTRVQLPETDSCVVAVQTLLGDGVRVVSAFQNVSAHKLKDPDYAIDCDVLV AGDDKEARATVMQLAVDAGLRGIDIGPLANSVVSESLTSALIWINKFYKIPDAGVRITGLP
Sequences:
>Translated_221_residues MTATIHTICVVGGTGAEGGGLALRWAKHGHRVIIASRDAAKAKAAADELNARLGGGTAEGADSASGVAEADIVVLTVPYQ AQIATVQGLKDALQGKILIDVTVPLVPPKVTRVQLPETDSCVVAVQTLLGDGVRVVSAFQNVSAHKLKDPDYAIDCDVLV AGDDKEARATVMQLAVDAGLRGIDIGPLANSVVSESLTSALIWINKFYKIPDAGVRITGLP >Mature_220_residues TATIHTICVVGGTGAEGGGLALRWAKHGHRVIIASRDAAKAKAAADELNARLGGGTAEGADSASGVAEADIVVLTVPYQA QIATVQGLKDALQGKILIDVTVPLVPPKVTRVQLPETDSCVVAVQTLLGDGVRVVSAFQNVSAHKLKDPDYAIDCDVLVA GDDKEARATVMQLAVDAGLRGIDIGPLANSVVSESLTSALIWINKFYKIPDAGVRITGLP
Specific function: Catalyzes the reduction of NADP(+) with F420H(2) via hydride transfer, and the reverse reaction, i.e. the reduction of F420 with NADPH. Probably functions in the regeneration of NADPH required in biosynthetic reactions [H]
COG id: COG2085
COG function: function code R; Predicted dinucleotide-binding enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the F420-dependent NADP reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR004455 - InterPro: IPR010185 [H]
Pfam domain/function: PF03807 F420_oxidored [H]
EC number: NA
Molecular weight: Translated: 22779; Mature: 22648
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATIHTICVVGGTGAEGGGLALRWAKHGHRVIIASRDAAKAKAAADELNARLGGGTAEG CCCEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCC ADSASGVAEADIVVLTVPYQAQIATVQGLKDALQGKILIDVTVPLVPPKVTRVQLPETDS CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCCCCC CVVAVQTLLGDGVRVVSAFQNVSAHKLKDPDYAIDCDVLVAGDDKEARATVMQLAVDAGL HHHHHHHHHCCCHHHHHHHHCCHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCC RGIDIGPLANSVVSESLTSALIWINKFYKIPDAGVRITGLP CCEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCC >Mature Secondary Structure TATIHTICVVGGTGAEGGGLALRWAKHGHRVIIASRDAAKAKAAADELNARLGGGTAEG CCEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCC ADSASGVAEADIVVLTVPYQAQIATVQGLKDALQGKILIDVTVPLVPPKVTRVQLPETDS CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCCCCC CVVAVQTLLGDGVRVVSAFQNVSAHKLKDPDYAIDCDVLVAGDDKEARATVMQLAVDAGL HHHHHHHHHCCCHHHHHHHHCCHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCC RGIDIGPLANSVVSESLTSALIWINKFYKIPDAGVRITGLP CCEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]