Click here to switch to the map view.

The map label for this gene is cofD [H]

Identifier: 86751508

GI number: 86751508

Start: 4994958

End: 4995947

Strand: Reverse

Name: cofD [H]

Synonym: RPB_4407

Alternate gene names: 86751508

Gene position: 4995947-4994958 (Counterclockwise)

Preceding gene: 86751509

Following gene: 86751507

Centisome position: 93.7

GC content: 68.59

Gene sequence:

>990_bases
ATGACCGCGCCTGTTGCAGACGATCACATCATTGCACTCGCCGGCGGCGTCGGCGGCGCCAAGCTGGCGGACGGTCTGGC
GCATGCGCTCGGCGACAAGCTCACCGTCATCGTCAACACCGGCGACGATTTCGAGCATCTCGGCTTCCACATCAGCCCCG
ATCTCGACACGGTCACCTACACGCTCGGCGGCGTCGCCAATGCGCAGCAGGGCTGGGGCCTCGAAGGCGAGACGTGGGGC
TTCATGGAGCAATTGGCGCGGCTCGGTGGACCGGCCTGGTTCAAGCTCGGCGATCGCGACCTCGCCACCCACGCCTATCG
CACCAACCGTCTGCGCGAAGGCGCGACGTTGACCGAGGTCGCCGCCGAACTGAGTGCTGCGCTCGGCATCGCCGCGCGCC
TGCTGCCGATGTCGGACGATGCGGTCCGGACGGTGATCCACAGCGGCGGCCGCGCAATCGCCTTCCAGGAATATTTCGTG
CGGCTGGCCTGCGGCGTCCCGGTCGATCGCATCGCGTTTGCCGGCGCTGCGGAGGCACGGCTCAATCCTGCGATCGGCGC
GCTGCCTCAGCCGGCGGCGGTGATCATCTGCCCGTCGAATCCGTATCTCAGCATCGATCCGATCCTGGCGGTGCCGGGTG
CGCGGGCGTGGCTGACGGAACTCGGCGTGCCGATCGTGGTGGTGTCGCCGATCGTCGGCGGCGCCGCCATCAAAGGTCCG
GCGGCCAAGATCATGCAGGAACTGAATGCGCCGGTGTCGGCGCTCGGCGTCGCCGCGCATTATCGCGGCCTCGTCGACGG
CATCGTCATCGACCGCTGCGATGAGGCCTTGGCGCCGGAGATCGCATCTCTCGGCATGGCCGTCCATGTCGTGCCGACGG
TGATGCGCTCGCACGCTGACCGGGTGGCCCTGGCCGACAGCTGCCTCGACTTCGCCCGCGCGCTGATCCGAACCCGCGCG
CCGCACCCCGACCAGGGTTCGACCAAATAG

Upstream 100 bases:

>100_bases
CCGCGGAGGCGACGCCGGTCGTCGTGGTCCGCGGGGTCGATCTCGCCGGCATCGGCACCGCGCGTGATCTGCTGCGGCCC
AAACACATGGATTTGTTTCG

Downstream 100 bases:

>100_bases
GCTTTGAAATGATGCCGGCAACCGAGTATCCGCATTGCCTGCCGATGCCGTGTCGTCGCGCGCTGAACGGCAGCAGTTTC
TCGCTGGGACGAAATCCAGA

Product: LPPG:FO 2-phospho-L-lactate transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTAPVADDHIIALAGGVGGAKLADGLAHALGDKLTVIVNTGDDFEHLGFHISPDLDTVTYTLGGVANAQQGWGLEGETWG
FMEQLARLGGPAWFKLGDRDLATHAYRTNRLREGATLTEVAAELSAALGIAARLLPMSDDAVRTVIHSGGRAIAFQEYFV
RLACGVPVDRIAFAGAAEARLNPAIGALPQPAAVIICPSNPYLSIDPILAVPGARAWLTELGVPIVVVSPIVGGAAIKGP
AAKIMQELNAPVSALGVAAHYRGLVDGIVIDRCDEALAPEIASLGMAVHVVPTVMRSHADRVALADSCLDFARALIRTRA
PHPDQGSTK

Sequences:

>Translated_329_residues
MTAPVADDHIIALAGGVGGAKLADGLAHALGDKLTVIVNTGDDFEHLGFHISPDLDTVTYTLGGVANAQQGWGLEGETWG
FMEQLARLGGPAWFKLGDRDLATHAYRTNRLREGATLTEVAAELSAALGIAARLLPMSDDAVRTVIHSGGRAIAFQEYFV
RLACGVPVDRIAFAGAAEARLNPAIGALPQPAAVIICPSNPYLSIDPILAVPGARAWLTELGVPIVVVSPIVGGAAIKGP
AAKIMQELNAPVSALGVAAHYRGLVDGIVIDRCDEALAPEIASLGMAVHVVPTVMRSHADRVALADSCLDFARALIRTRA
PHPDQGSTK
>Mature_328_residues
TAPVADDHIIALAGGVGGAKLADGLAHALGDKLTVIVNTGDDFEHLGFHISPDLDTVTYTLGGVANAQQGWGLEGETWGF
MEQLARLGGPAWFKLGDRDLATHAYRTNRLREGATLTEVAAELSAALGIAARLLPMSDDAVRTVIHSGGRAIAFQEYFVR
LACGVPVDRIAFAGAAEARLNPAIGALPQPAAVIICPSNPYLSIDPILAVPGARAWLTELGVPIVVVSPIVGGAAIKGPA
AKIMQELNAPVSALGVAAHYRGLVDGIVIDRCDEALAPEIASLGMAVHVVPTVMRSHADRVALADSCLDFARALIRTRAP
HPDQGSTK

Specific function: Catalyzes the transfer of the 2-phospholactate moiety from lactyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl- 8-hydroxy-5-deazariboflavin (FO) with the formation of the L- lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5- deazariboflavin (F42

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CofD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010115 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 34195; Mature: 34063

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPVADDHIIALAGGVGGAKLADGLAHALGDKLTVIVNTGDDFEHLGFHISPDLDTVTY
CCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHCCEEECCCCCEEEE
TLGGVANAQQGWGLEGETWGFMEQLARLGGPAWFKLGDRDLATHAYRTNRLREGATLTEV
ECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHH
AAELSAALGIAARLLPMSDDAVRTVIHSGGRAIAFQEYFVRLACGVPVDRIAFAGAAEAR
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHHHCCCCHHH
LNPAIGALPQPAAVIICPSNPYLSIDPILAVPGARAWLTELGVPIVVVSPIVGGAAIKGP
CCCCCCCCCCCCEEEEECCCCCEEECCEEECCCCHHHHHHCCCCEEEECCCCCCCCCCCH
AAKIMQELNAPVSALGVAAHYRGLVDGIVIDRCDEALAPEIASLGMAVHVVPTVMRSHAD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCH
RVALADSCLDFARALIRTRAPHPDQGSTK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TAPVADDHIIALAGGVGGAKLADGLAHALGDKLTVIVNTGDDFEHLGFHISPDLDTVTY
CCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHCCEEECCCCCEEEE
TLGGVANAQQGWGLEGETWGFMEQLARLGGPAWFKLGDRDLATHAYRTNRLREGATLTEV
ECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHH
AAELSAALGIAARLLPMSDDAVRTVIHSGGRAIAFQEYFVRLACGVPVDRIAFAGAAEAR
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHHHCCCCHHH
LNPAIGALPQPAAVIICPSNPYLSIDPILAVPGARAWLTELGVPIVVVSPIVGGAAIKGP
CCCCCCCCCCCCEEEEECCCCCEEECCEEECCCCHHHHHHCCCCEEEECCCCCCCCCCCH
AAKIMQELNAPVSALGVAAHYRGLVDGIVIDRCDEALAPEIASLGMAVHVVPTVMRSHAD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCH
RVALADSCLDFARALIRTRAPHPDQGSTK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA