| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751431
Identifier: 86751431
GI number: 86751431
Start: 4912591
End: 4912965
Strand: Reverse
Name: 86751431
Synonym: RPB_4329
Alternate gene names: NA
Gene position: 4912965-4912591 (Counterclockwise)
Preceding gene: 86751432
Following gene: 86751430
Centisome position: 92.15
GC content: 68.8
Gene sequence:
>375_bases GTGAACCTCTGCCTCGCTTCCGCCGGCGTGGTGAAGACGCTGGCGGTCGCCGCCTTCACGCTGGTCTGGACGCACTCGAT CGAGAAAACGGCGTGGCAGGAGGACTGGCGGGTCACGCCGCAGGGGCTCGATCTGGTGCAGGCGCGCGTCAAGGGCACCG GCGCCGGCATGGAGCCGCCGCCCGAGGCGCGGCTGGTCGACGGCTGGTTTCAATGGACGCCGAAGCGCAAACCGTTGCGC GAAGTGGTGCTCGCCAATTCCGGCCTGGCCGGCGAATGGCGACTGTGCGCTGACGGACAATGCCGGACTCTGTCGCAGAT CATCGGCCACGAGATCGGCCCGCAGCCGACGACGATGAGCGCGTGTCCCGAGTAG
Upstream 100 bases:
>100_bases TCGGCGAATTTCCCTACAGCGACTATGTCGGCTTCACCATCGCGGCGCTGGTGGTGGCGTGGCAATGGCGGCAGCGGTCG CGCAACGCGGTGGCGGCTGC
Downstream 100 bases:
>100_bases TCTACTAGTGCCTTAGCGCTCGCTCTCAACGCGCTGTCTTCACCTCTCCCCGCGCGCGGGGAGAGGTCGGTCCGCATCGT CAGATGCGGGCCGGGTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MNLCLASAGVVKTLAVAAFTLVWTHSIEKTAWQEDWRVTPQGLDLVQARVKGTGAGMEPPPEARLVDGWFQWTPKRKPLR EVVLANSGLAGEWRLCADGQCRTLSQIIGHEIGPQPTTMSACPE
Sequences:
>Translated_124_residues MNLCLASAGVVKTLAVAAFTLVWTHSIEKTAWQEDWRVTPQGLDLVQARVKGTGAGMEPPPEARLVDGWFQWTPKRKPLR EVVLANSGLAGEWRLCADGQCRTLSQIIGHEIGPQPTTMSACPE >Mature_124_residues MNLCLASAGVVKTLAVAAFTLVWTHSIEKTAWQEDWRVTPQGLDLVQARVKGTGAGMEPPPEARLVDGWFQWTPKRKPLR EVVLANSGLAGEWRLCADGQCRTLSQIIGHEIGPQPTTMSACPE
Specific function: Unknown
COG id: COG4729
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13537; Mature: 13537
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLCLASAGVVKTLAVAAFTLVWTHSIEKTAWQEDWRVTPQGLDLVQARVKGTGAGMEPP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC PEARLVDGWFQWTPKRKPLREVVLANSGLAGEWRLCADGQCRTLSQIIGHEIGPQPTTMS CCCEEECHHHHCCCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCC ACPE CCCC >Mature Secondary Structure MNLCLASAGVVKTLAVAAFTLVWTHSIEKTAWQEDWRVTPQGLDLVQARVKGTGAGMEPP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC PEARLVDGWFQWTPKRKPLREVVLANSGLAGEWRLCADGQCRTLSQIIGHEIGPQPTTMS CCCEEECHHHHCCCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCC ACPE CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA