| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751427
Identifier: 86751427
GI number: 86751427
Start: 4908012
End: 4908272
Strand: Reverse
Name: 86751427
Synonym: RPB_4325
Alternate gene names: NA
Gene position: 4908272-4908012 (Counterclockwise)
Preceding gene: 86751428
Following gene: 86751426
Centisome position: 92.06
GC content: 67.82
Gene sequence:
>261_bases ATGTTGCTCACCACGAAACGCCTGATCGCCCTGTCCGTCATCGCCATCGCGCTCGCCGGATGCGCCAGCCGCTACGATGC GCCGGCCGATCTCGGCGACGACGACGCGTTCTGCAAGCAGAACGGCGTTGCGGTCGGTTCGCCGGAATACGTCGCCTGCC GCAAGGACCGCGACGTCCAGCGCTCCAACGCCGTCACCCGCGCCAACCGCGCCCAGCGCGATCTCGGCGACTACATGATG CAGAACCCGAGCCGGCCGTAA
Upstream 100 bases:
>100_bases GCCGCGCAGCGGCGAACCCGGAATCTCGCTTCGCCGAACACCTCGGGATTCCGGGTTCGCGCTCCGCGCGCCCCGGAATG ACGGACGCTTAGGGTCTTGA
Downstream 100 bases:
>100_bases CGCGAGCCTCATCCCGAGCGCTGCCGGATTGCGCGAGGCCGCGCGGGTTTGCTCGTAACTTGAAGCTCAGTTGCGAGCCG GTCGAAGAAACTGTGTCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MLLTTKRLIALSVIAIALAGCASRYDAPADLGDDDAFCKQNGVAVGSPEYVACRKDRDVQRSNAVTRANRAQRDLGDYMM QNPSRP
Sequences:
>Translated_86_residues MLLTTKRLIALSVIAIALAGCASRYDAPADLGDDDAFCKQNGVAVGSPEYVACRKDRDVQRSNAVTRANRAQRDLGDYMM QNPSRP >Mature_86_residues MLLTTKRLIALSVIAIALAGCASRYDAPADLGDDDAFCKQNGVAVGSPEYVACRKDRDVQRSNAVTRANRAQRDLGDYMM QNPSRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9345; Mature: 9345
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTTKRLIALSVIAIALAGCASRYDAPADLGDDDAFCKQNGVAVGSPEYVACRKDRDVQ CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCCH RSNAVTRANRAQRDLGDYMMQNPSRP HHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLLTTKRLIALSVIAIALAGCASRYDAPADLGDDDAFCKQNGVAVGSPEYVACRKDRDVQ CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCCH RSNAVTRANRAQRDLGDYMMQNPSRP HHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA