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The map label for this gene is ygfA [H]

Identifier: 86751391

GI number: 86751391

Start: 4875275

End: 4875862

Strand: Reverse

Name: ygfA [H]

Synonym: RPB_4289

Alternate gene names: 86751391

Gene position: 4875862-4875275 (Counterclockwise)

Preceding gene: 86751393

Following gene: 86751390

Centisome position: 91.45

GC content: 69.9

Gene sequence:

>588_bases
ATGAGCGAACTTTCCGACAGCGTCTCCAAGGATGAATTGCGCGCCGCGGCATTGGCCCGGCGTTTGGCGTTGTCGGACGA
GGCCCGCGCCGCGGCCGCCGTTGTGATTGCCGCAAGGCCTCTGCCGTTCGCGGTGCCGGAGGGCGCGATCGTCGCCGGTT
ATGTGCCGATTCGCGGTGAAATCGATCCGCTGCCGTTGATGCGCGCGCTTGCTGAGGGCGGCGCGAGGCTGGCCTTGCCG
GTGGTGACCGGGCCCGGACGGCCGCTGAAATTCCGCGCCTGGTCGGAGGGCGAGGCGCTGCAGCGCAGCCGACTCGGCAT
CCTGGAGCCGCTACCCGGCGCGCCGGAGCTGGTTCCGGACATCGTGCTGGCACCGCTCGCCGCGTTCGATGCGCAGGGCC
ACCGCATCGGCTACGGCGCCGGCCACTACGACTGCACGCTCGCGGCGCTGCGCGGCTCGAAGCCGGTGATCGCCGCGGGG
CTCGCCTTTGCGGTGCAGCAAATCGAGGCGGTCCCCGCCGCCGCCCACGACGTGGCGCTGGATTATGTGATAACGGAACG
CGACACGCTCATTTTCCGGAGTCGATAG

Upstream 100 bases:

>100_bases
CTCCGGGATCGAGCGCTTCAACGGTCATGTGGCTTCGCACTTCCTCCTCCCTCGTGCTCTCCCGGCTTTTCCGGCCGGCG
GCCCCTGCCTATAAGCGGGG

Downstream 100 bases:

>100_bases
GTTTGCGCATTCTGTTCATCGGCGACGTCGTCGGCAAATCCGGCCGCACGGCGATCGCCGAACATCTGCCCCGAGCGATC
CGCGACTGGCAGCTCGATTG

Product: 5-formyltetrahydrofolate cyclo-ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSELSDSVSKDELRAAALARRLALSDEARAAAAVVIAARPLPFAVPEGAIVAGYVPIRGEIDPLPLMRALAEGGARLALP
VVTGPGRPLKFRAWSEGEALQRSRLGILEPLPGAPELVPDIVLAPLAAFDAQGHRIGYGAGHYDCTLAALRGSKPVIAAG
LAFAVQQIEAVPAAAHDVALDYVITERDTLIFRSR

Sequences:

>Translated_195_residues
MSELSDSVSKDELRAAALARRLALSDEARAAAAVVIAARPLPFAVPEGAIVAGYVPIRGEIDPLPLMRALAEGGARLALP
VVTGPGRPLKFRAWSEGEALQRSRLGILEPLPGAPELVPDIVLAPLAAFDAQGHRIGYGAGHYDCTLAALRGSKPVIAAG
LAFAVQQIEAVPAAAHDVALDYVITERDTLIFRSR
>Mature_194_residues
SELSDSVSKDELRAAALARRLALSDEARAAAAVVIAARPLPFAVPEGAIVAGYVPIRGEIDPLPLMRALAEGGARLALPV
VTGPGRPLKFRAWSEGEALQRSRLGILEPLPGAPELVPDIVLAPLAAFDAQGHRIGYGAGHYDCTLAALRGSKPVIAAGL
AFAVQQIEAVPAAAHDVALDYVITERDTLIFRSR

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=173, Percent_Identity=32.3699421965318, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 20426; Mature: 20295

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELSDSVSKDELRAAALARRLALSDEARAAAAVVIAARPLPFAVPEGAIVAGYVPIRGE
CCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHEEEEEEECCCCCCCCCCCEEEEEEECCCC
IDPLPLMRALAEGGARLALPVVTGPGRPLKFRAWSEGEALQRSRLGILEPLPGAPELVPD
CCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHCCCCCCCCCCCHHHHHH
IVLAPLAAFDAQGHRIGYGAGHYDCTLAALRGSKPVIAAGLAFAVQQIEAVPAAAHDVAL
HHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHEEE
DYVITERDTLIFRSR
EEEEECCCEEEEECC
>Mature Secondary Structure 
SELSDSVSKDELRAAALARRLALSDEARAAAAVVIAARPLPFAVPEGAIVAGYVPIRGE
CCHHHHCCHHHHHHHHHHHHHHCCCCHHHHEEEEEEECCCCCCCCCCCEEEEEEECCCC
IDPLPLMRALAEGGARLALPVVTGPGRPLKFRAWSEGEALQRSRLGILEPLPGAPELVPD
CCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHCCCCCCCCCCCHHHHHH
IVLAPLAAFDAQGHRIGYGAGHYDCTLAALRGSKPVIAAGLAFAVQQIEAVPAAAHDVAL
HHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHEEE
DYVITERDTLIFRSR
EEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]