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The map label for this gene is yebC [C]

Identifier: 86751376

GI number: 86751376

Start: 4856718

End: 4857464

Strand: Reverse

Name: yebC [C]

Synonym: RPB_4273

Alternate gene names: 86751376

Gene position: 4857464-4856718 (Counterclockwise)

Preceding gene: 86751379

Following gene: 86751375

Centisome position: 91.11

GC content: 64.79

Gene sequence:

>747_bases
ATGGCCGGACATTCCCAATTCAAGAACATCATGCACCGCAAGGGCAAGCAGGATGCCCAGAGGTCCAAGGCGTTCAGCAA
GCTGGCCCGCGAAATCACCGTCGCCGCCAAGCTCGGCACGCCGGACCCGGCGATGAACCCGCGGCTGCGCGCCGCCGTGA
TCGCGGCGCGGGCCGAGAATATGCCGAAGGACAATATCGAGCGCGCGATCAAGAAGGCGATCGGCGGCGACAGCGAGAAC
TACGACGAGATCCGCTACGAGGGCTACGGCCCCGGCGGCGTCGCGGTGATCGTCGAGGCGCTGACCGACAACCGCAACCG
CGCCGCCTCCGACATCCGCTCGTTCTTCACCAAATCCGGCGGCAATCTCGGCGAAACCGGCTCGGTGTCGTTCATGTTCG
ACCGCACCGGCGTGATCGAATACGACGCCGACAAGGCCTCTGCGGACGACATGCTCGAAGCCGCGATCGAGGCCGGCGCC
GACGACGTGGCGTCGTCCGAATCCGGCCACGAGGTCTATGCGTCGCAGGACACGTTCCGCGACGTCGCCAAGGCACTCGA
AGCCAAATTCGGCGAGGCCCGCAAGGCGGCGCTGATCTGGAAGCCGCAGAACACCGTCGCGGTCGACGACGAGACCGGCG
AGAAGCTGTTCAAGCTGATGGATCACCTCAACGACCACGACGACGTCCAGAACGTCTACGCCAATTTCGAAGTGTCGGAC
GCCTTGATGGCGAAGATGGCGGGGTGA

Upstream 100 bases:

>100_bases
GTGCGGATATTGGGGCCAGGTCTTTGATTTCAGGCCCTGCGCCGCTTATAACCCCGCGCCGCAGCCCGAAATTTTCCCGA
TCGACCGCGAGAGAGCACGC

Downstream 100 bases:

>100_bases
GCCACTCGCGAACGGACGGCGCCGCCCCACAACACCACGTCATCGCCCGGCTCGTCCGGGCGACCCAGTATCCCAGAGCG
TTCATGGTGGGGCGTAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MAGHSQFKNIMHRKGKQDAQRSKAFSKLAREITVAAKLGTPDPAMNPRLRAAVIAARAENMPKDNIERAIKKAIGGDSEN
YDEIRYEGYGPGGVAVIVEALTDNRNRAASDIRSFFTKSGGNLGETGSVSFMFDRTGVIEYDADKASADDMLEAAIEAGA
DDVASSESGHEVYASQDTFRDVAKALEAKFGEARKAALIWKPQNTVAVDDETGEKLFKLMDHLNDHDDVQNVYANFEVSD
ALMAKMAG

Sequences:

>Translated_248_residues
MAGHSQFKNIMHRKGKQDAQRSKAFSKLAREITVAAKLGTPDPAMNPRLRAAVIAARAENMPKDNIERAIKKAIGGDSEN
YDEIRYEGYGPGGVAVIVEALTDNRNRAASDIRSFFTKSGGNLGETGSVSFMFDRTGVIEYDADKASADDMLEAAIEAGA
DDVASSESGHEVYASQDTFRDVAKALEAKFGEARKAALIWKPQNTVAVDDETGEKLFKLMDHLNDHDDVQNVYANFEVSD
ALMAKMAG
>Mature_247_residues
AGHSQFKNIMHRKGKQDAQRSKAFSKLAREITVAAKLGTPDPAMNPRLRAAVIAARAENMPKDNIERAIKKAIGGDSENY
DEIRYEGYGPGGVAVIVEALTDNRNRAASDIRSFFTKSGGNLGETGSVSFMFDRTGVIEYDADKASADDMLEAAIEAGAD
DVASSESGHEVYASQDTFRDVAKALEAKFGEARKAALIWKPQNTVAVDDETGEKLFKLMDHLNDHDDVQNVYANFEVSDA
LMAKMAG

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=246, Percent_Identity=32.9268292682927, Blast_Score=127, Evalue=1e-29,
Organism=Escherichia coli, GI1788171, Length=248, Percent_Identity=47.5806451612903, Blast_Score=226, Evalue=1e-60,
Organism=Escherichia coli, GI1788294, Length=233, Percent_Identity=38.6266094420601, Blast_Score=149, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17556100, Length=242, Percent_Identity=26.0330578512397, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=36.5019011406844, Blast_Score=128, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24583305, Length=248, Percent_Identity=27.0161290322581, Blast_Score=81, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26911; Mature: 26780

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSQFKNIMHRKGKQDAQRSKAFSKLAREITVAAKLGTPDPAMNPRLRAAVIAARAEN
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC
MPKDNIERAIKKAIGGDSENYDEIRYEGYGPGGVAVIVEALTDNRNRAASDIRSFFTKSG
CCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCC
GNLGETGSVSFMFDRTGVIEYDADKASADDMLEAAIEAGADDVASSESGHEVYASQDTFR
CCCCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHCCCHHHHCCCCCCEEECCHHHHH
DVAKALEAKFGEARKAALIWKPQNTVAVDDETGEKLFKLMDHLNDHDDVQNVYANFEVSD
HHHHHHHHHHCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
ALMAKMAG
HHHHHHCC
>Mature Secondary Structure 
AGHSQFKNIMHRKGKQDAQRSKAFSKLAREITVAAKLGTPDPAMNPRLRAAVIAARAEN
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC
MPKDNIERAIKKAIGGDSENYDEIRYEGYGPGGVAVIVEALTDNRNRAASDIRSFFTKSG
CCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCC
GNLGETGSVSFMFDRTGVIEYDADKASADDMLEAAIEAGADDVASSESGHEVYASQDTFR
CCCCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHCCCHHHHCCCCCCEEECCHHHHH
DVAKALEAKFGEARKAALIWKPQNTVAVDDETGEKLFKLMDHLNDHDDVQNVYANFEVSD
HHHHHHHHHHCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
ALMAKMAG
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA