Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86751353

Identifier: 86751353

GI number: 86751353

Start: 4836003

End: 4836875

Strand: Reverse

Name: 86751353

Synonym: RPB_4250

Alternate gene names: NA

Gene position: 4836875-4836003 (Counterclockwise)

Preceding gene: 86751354

Following gene: 86751350

Centisome position: 90.72

GC content: 68.73

Gene sequence:

>873_bases
ATGGTCGAGTTTACTGCGTTCGCGTTCGGTCGCGTAGTTGTGTTGGGTCTGGGTATCGCGGCGATCGCCGCATTGGCGTC
CCCCGCATCGGCCCGGCCGTTGCATCGTCATCATGGTCACACCGTTTCTCACTACGGCGATCACAGCGCGTCGGTTCGCG
GCGCTCATCGCGCGTCCCGCAGCGCGTATCGCCACCAGCGCGCCGCCAAGCGCCATCGCGCCGTGCGCCGCGCGCCGCAG
GCGGCGACCGGCGGCTTTGCTCAGCCGCAGCAGTTCGGCTTCGATCAGGGGCGTCATGATCAGGGGCAGAACTATTCGCT
CAGCTACGCGCAGAACCAGGCGCAGAATTTCACGCCCGGCGGCGCTTCCACGTTTTCGTCCAACTACTCCGACGGCATCC
ATGCGCCGCGCGTGACCAAGCAGCGCGTCTCGCGGCGCGCCGTGCGGGCTCGGGCGATGGCGCAACAGACGGAGCCGCAG
CAGATGCAGACGCAGAGCTGGGCCGGTAGCGGCGGTGGCGGCAATTCGAGCCTGGTCGCCGAGGCGCGCCGCTACATCGG
CGGCAACCCGACCGGCCGCAGCCGGCTGTGGTGCGCGCGGTTCATGAACATGGTGCTGGAGCGCGCGGGCCATCGCGGCA
CCGGCTCCGACATGGCGAGTTCGTTCGCCCGTTACGGCCAGCGCATCTCCGGCCCGCAGGTCGGCGCCATCGCGGTGATG
TCGCGCGGCAAGCGCGGCGGCCATGTCGGCATCGTCAGCGGCATCGATTCCAGCGGCAATCCGATCGTCGTCTCCGGCAA
TCACGGCCGCCGCGTCGCCGAGTCGGTGTACTCCAAGAGCCGCATCTACGCCTATGTGATGCCGTCGAGCTGA

Upstream 100 bases:

>100_bases
TGACGACTTCGTCGCCGCACGAGTCATTCTCTCGCCATCCCCGCTCTGTTTACGCACCGGGCCGGTCGTACTTGCCGGGT
ATCGATGGAGAGAGTTCTGC

Downstream 100 bases:

>100_bases
GGCCCGCTCTTACCCTCTCCCCTTGTGGGAGAGGGTAAGAGCGTGCTCACGCTGAACATGCCGACAGCCGCCGTGCAGTT
AATGTATTAGGAAGGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MVEFTAFAFGRVVVLGLGIAAIAALASPASARPLHRHHGHTVSHYGDHSASVRGAHRASRSAYRHQRAAKRHRAVRRAPQ
AATGGFAQPQQFGFDQGRHDQGQNYSLSYAQNQAQNFTPGGASTFSSNYSDGIHAPRVTKQRVSRRAVRARAMAQQTEPQ
QMQTQSWAGSGGGGNSSLVAEARRYIGGNPTGRSRLWCARFMNMVLERAGHRGTGSDMASSFARYGQRISGPQVGAIAVM
SRGKRGGHVGIVSGIDSSGNPIVVSGNHGRRVAESVYSKSRIYAYVMPSS

Sequences:

>Translated_290_residues
MVEFTAFAFGRVVVLGLGIAAIAALASPASARPLHRHHGHTVSHYGDHSASVRGAHRASRSAYRHQRAAKRHRAVRRAPQ
AATGGFAQPQQFGFDQGRHDQGQNYSLSYAQNQAQNFTPGGASTFSSNYSDGIHAPRVTKQRVSRRAVRARAMAQQTEPQ
QMQTQSWAGSGGGGNSSLVAEARRYIGGNPTGRSRLWCARFMNMVLERAGHRGTGSDMASSFARYGQRISGPQVGAIAVM
SRGKRGGHVGIVSGIDSSGNPIVVSGNHGRRVAESVYSKSRIYAYVMPSS
>Mature_290_residues
MVEFTAFAFGRVVVLGLGIAAIAALASPASARPLHRHHGHTVSHYGDHSASVRGAHRASRSAYRHQRAAKRHRAVRRAPQ
AATGGFAQPQQFGFDQGRHDQGQNYSLSYAQNQAQNFTPGGASTFSSNYSDGIHAPRVTKQRVSRRAVRARAMAQQTEPQ
QMQTQSWAGSGGGGNSSLVAEARRYIGGNPTGRSRLWCARFMNMVLERAGHRGTGSDMASSFARYGQRISGPQVGAIAVM
SRGKRGGHVGIVSGIDSSGNPIVVSGNHGRRVAESVYSKSRIYAYVMPSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31057; Mature: 31057

Theoretical pI: Translated: 12.15; Mature: 12.15

Prosite motif: PS50911 CHAP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEECCC
>Mature Secondary Structure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HCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA